Array 1 93617-95768 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFG01000001.1 Wohlfahrtiimonas chitiniclastica strain F6516 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 93617 27 75.0 174 .......ATG...A.C...-....T... GGTTGCGCGGTTGCAGGCGCGATTGAGCATGCGGATACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTGGATAAATATCAGTAAATTACATGTCATTGGAAAAGGATTGGTTTTATGGCTATAAACTGCCGAAATCATGATGTTTCCAATGGCTCTGTAATATTTTTAAGT T [93621] 93819 28 100.0 32 ............................ AATTAAAGAAAACCCCTTTAAGCTCATTCACA 93879 28 100.0 32 ............................ CATATCTATGTTGAAAGATCCTCGACATAGTG 93939 28 100.0 32 ............................ TGATTCAAAATACATATTCGCAAGCGAAGGGC 93999 28 100.0 32 ............................ TCTATGCCCACCGCCTCTTTGTCGTCCGCATC 94059 28 100.0 32 ............................ AGGCAGTTTCTTAAATGATGAAACCGCCAAAA 94119 28 100.0 32 ............................ TCACCGGCGCGGCGCTGGTATCTTTGCATTGC 94179 28 100.0 32 ............................ CGCAATTGCCCCAAAGGGCAGTGTCCTTATCG 94239 28 100.0 32 ............................ CCACATCTCAAGCTCTTGTGGTGTGATCGTTC 94299 28 100.0 32 ............................ TACCACCATCATTCACCCTCATTAGAAAGTTC 94359 28 100.0 32 ............................ ACAGTGACATCCTTCAATGCCGCCATCTCTTC 94419 28 100.0 32 ............................ ACGCACCGGCATACCATCGGTTGCATTGGTGC 94479 28 100.0 32 ............................ CAACCATTCTGTTTCGTTGTACTCATCAATTT 94539 28 100.0 33 ............................ CATTGAAGCGGCAGGCACTCGCCCGCTTGTCGC 94600 28 100.0 32 ............................ AACTGAACAAAAGAGAGAGGTATTTATGTCAA 94660 28 100.0 32 ............................ ATGACTTTAAGCGAATGAATCACCCTTGCAAC 94720 28 100.0 32 ............................ GTTCTAGGAGTGAGATATGGAAAAGTTAGGTA 94780 28 100.0 32 ............................ CACCAAATTTAAACAGGTAATTATTATGTCTA 94840 28 100.0 32 ............................ ATTAGCGCTTTTATTCCCATCCACCAATGGTG 94900 28 100.0 32 ............................ TCGCCGCGCTCAATACTGACAAACTCAAACAG 94960 28 100.0 32 ............................ GCCTTCAATGATTGACACCCCTACGTTTGCAG 95020 28 100.0 32 ............................ ATCAAAGAATGATACGAATGCATTGCCCAGGC 95080 28 100.0 32 ............................ TGCCGTGTAATAGGTTTCGCTCTTCATGATTG 95140 28 100.0 32 ............................ CGACAAGCTCATAGCATTCATGAACTCGTCAA 95200 28 100.0 32 ............................ GCCAACGTATAACGAATCTTTTGTTTTTTGCA 95260 28 100.0 33 ............................ CAAGTGAGGCGGCCAATGCTTGCGCGCCATCTT 95321 28 100.0 32 ............................ AATTCAAGGAGGTTAAAAATGAATTTCGAATT 95381 28 100.0 32 ............................ AACGTACTCAACGAGTTCACTTTTGGATTTTT 95441 28 100.0 32 ............................ AGGTTTGGCGACCCGTTTTGTGTGACGTTCTT 95501 28 100.0 32 ............................ GTACTACCACTTGAAATAATTGGGCTTGAATC 95561 28 100.0 32 ............................ TTACCTTGTGCACCGATCCGCACCAGCACATC 95621 28 100.0 32 ............................ ATCATTTTTTTACACGCTCCGCCTTTCTAACT 95681 28 100.0 32 ............................ TCAATGACGATCTTGGCTATGATATTGCTGAT 95741 28 96.4 0 ....................T....... | ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 34 28 99.2 36 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TGTATATATAACATATATCTATAGTATGTTTATTGGATGTCTAAAATCCTAGCGTACTTTTTTACAGAGGTAAAGTGCTGATCTTTGCCTTTATGAGATTTTTTTGTAAAATTTTATTTAATGGATTGAAATAAAAGCATAAAAAAATTATGTTATGGGGTGTTGAACATATTTAAGGAGATCAATATGAAAAAATTATCAGTATTGCTATTGATGGCAGTAGGTTTGGTAGGTTGCGCATCTGTGGAGAAGGATACAGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCTTGGCGCATCGTGGTCAAGCATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTTTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGACTTCACTGCCAC # Right flank : AGACCGGAGCTGTGCCATCGCAACGGGATTATGAACAGACAGTAAAACTAATTCGTTAAGTTACTCACCATAATACGCCCAAAGCAGGACAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATCCACAACCGGGCAGCCTTGACTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAAGGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGCGCGCGAATGCCCACACGGTATTTACCGAGAGAAGATGCATAGCTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCCACATTGCCATAACCATGGGCAACGATGCTTTTGATCTGCGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCG # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.38, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 219775-220222 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFG01000001.1 Wohlfahrtiimonas chitiniclastica strain F6516 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 219775 28 100.0 32 ............................ TTTGCGCGCACAGATGCAACCTCTGACCAATC 219835 28 100.0 32 ............................ GCTAAGGCTTCACTTGTTACCCGTTTTCAGAC 219895 28 100.0 32 ............................ AAAGGACAAGAAACCAAGGCCGACAAATGGGG 219955 28 100.0 32 ............................ GCACTAGATAGTGAAAAAACACGCACAAAAGC 220015 28 100.0 32 ............................ ACTCAAGACCACTATCATTGTCACAAAGTATT 220075 28 100.0 32 ............................ GGCATCTCTTGATGACCCTTTAATGGCAATAC 220135 28 100.0 32 ............................ ATACAGTTTTTTGCGCTCAACTAAATACGAGA 220195 28 96.4 0 .............C.............. | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTGAATGCAGGTTTGTGGCTGTCACGCTTGACGGATTATGTGCACATTTCTTCTATTAAGCCGGTGCCCAATCGTGTGACGCATTATGCGATTTATCAGCGTAAACAGGTCAAAAGCAGTGTTGAGCGTTTAGCGCGCCGTTATGCTAAGCGTAAGCATGTGACATTTGAGGATGCCATGGCACATTTGAATGGCAAAACGCCAGAATATTGTGATTTGCCTTATGTTCAGATGAAAAGTGAAAGCACGGATCAACGTTTTCATTTATTGATCCATAAAGTAAAAGTGACAGCACCAACGGAGGCTGCAAACTTTACAACGTATGGTTTGAGTCATCATGAACAATTGTCTGCTGTCCCTGAATTTTAACCAATGTTTTTTGCTCTTTAAAAATTTGGATAAAAATCAGTAGCTTATAAAATAAGGAAAAATCATTGGTCTTTTTAGGTAAACTACCTGCGATCAGTGATTTTTCCTATCTTTTGTGCCGAAATTTTACT # Right flank : AAGTGGTTCCATGGTGAATTTGGAAAGTTTGCGGTTCACTGACTAAAAATTGAGAGTTTATAAATGACATTACTAAAAGTGTTGGCACGACCTTTGTTTGTGTTGAAAATTCATTCATTACATCTTTGCCAGTGTTTGCGGATGCCAATAGCAATACCGGTGGCAGCACACAATGGAATAATTCTGTGAACATTAAAATGTCCATCGATATGTATGACAATGGCGTGATGGACATTGGTATCAATGCAGAAATTGAAAATAAAAATGAAATCTCAGACAGATTTAAACATTATTGCGGCTATGTGCTTGGGCGTTTATTCAGTGGTCAGTTGTATAAACGCGGCTGGGTGAATAATGAGTATTTTGGTACAAGCAGCCATTAAGACTGTTGCATTTGTAGCCATTGATCAAGTGCGTTGGCAAATTGTTGACGCTCTTTTTGTGATAATGGTGGCGGACCTGAAGTTTGTACGCCACTTGAGCGTAATTCATCCATAAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //