Array 1 7926395-7924592 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYEY01000001.1 Streptomyces sp. 2114.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================================== ================== 7926394 28 69.0 126 ....G....CG..C....TC..C.-...T TCGTTGCGGCGGCGACGGCATCCGCTCCGTTCGGATTGTGCTTGTGCCAGCGGCGGTTCTGCTCAGTGGCATACGCCCGCCGGGCCTCGGCTTCGGCTTCCTCGGTTTGAAGGCGCTGCTGCGGTA 7926240 28 89.7 32 C..............-.........A... CCGCGGGATGCCCGTCCGCCGAGCTGCATCTG C [7926229] 7926179 28 75.9 121 .C......TA..C..A.....-....T.. TTTCGGGCCAGGCAGTTGCCTGCGAGGGGCCGTGTGGCCCGGTAGATTCAGGCGGGTGCATGACCGGCGTTCCTTGAATCACGAATCGGCAAAACGCTCCTAACGGCGCAGGTCGCGAAGG 7926030 29 100.0 32 ............................. GTCAGCATGGAGCCGAAGCGGACGTATTCGCC 7925969 29 96.6 30 ............................C GGTCCTGGCCTCGCTGGCAGCGGCTGAGCG 7925910 29 100.0 32 ............................. TAGACGAGGGCGCGCATGTACTGGCGGACCGC 7925849 29 96.6 32 ............................T CTTCCCACTCGTCCCAGTCGGACGGCAGCGGC 7925788 29 100.0 32 ............................. CTTCCCCGGAGAGCGCAGGGTCACCGAGCCGG 7925727 29 100.0 32 ............................. GCGTAGTTCCGCTGTACCAGCGTGATTCCGGC 7925666 29 96.6 32 .........T................... GGCCAGCGGTCCGGCCTGATCTCCGTGCTGCA 7925605 29 100.0 32 ............................. ACGCTCGGCCTCGCGGTAGTGCTGGGGTCCCT 7925544 28 89.7 33 ............C...........-...C GCCTGGGTGGAACAAGACCTGGGACCGCCCCGA 7925483 29 93.1 32 ............C...........G.... CTGCTGGATCTGCCGGACCCGACGCGCGTGCA 7925422 29 93.1 32 ............C...........G.... CTCAACTGCAGCATCAGCCTGGGCTCCGGCGG 7925361 29 89.7 33 ............C.............T.A GGACCTGGTCGTACCGGCCCTCGACGTCGTCGA 7925299 29 89.7 32 ............C.............T.A CGGGGGTGAGTGCCGTGGCGGACCGTACTGTG 7925238 29 93.1 32 ............C...........G.... CTCAACGCTGTACGACCCGGGAGTGCCGAGGG 7925177 29 96.6 32 ............C................ GAGACGCCGCGTGCGCACCTTCTGCCTGCTGA 7925116 29 93.1 32 ............C...........G.... GCGGGCTGTCGTCTCGTACAGGCCGGCGACAG 7925055 29 89.7 33 ............C............A..A GGCCACCCCCGAGATCGTCGCCTTCATGATGAG 7924993 29 96.6 3 ............C................ GCC Deletion [7924962] 7924961 29 79.3 124 A..G...G.C................TT. ATCCTGGCCAGGTAGTGCCTGCGAGGAGCCGTGTGGCTCGGTAGATTCAGGCGGGTGCATGACCGGCGTTCCTTGAATCACGAATCGGCAAAACGCTCCTAACGGCGCAGGTCGCGACGGGTGC 7924808 29 93.1 32 ....G.......................T GCGACCCACGCCACGCAGGTACACCGGAGCGG 7924747 29 96.6 32 ....G........................ CCCGAGCTGCGGGTCGCCGGGGCGAGGCCGGC 7924686 29 96.6 37 ....G........................ TTAGTGCATGCCGGGGGGCGGTGGCTGCTCCACCCCC 7924620 29 96.6 0 ....G........................ | ========== ====== ====== ====== ============================= ============================================================================================================================== ================== 26 29 92.7 42 GTGCTCTCCGCGGAGGCGGAGGTGAGCCG # Left flank : CCCCTTCACCTCAACTCATCGTCCCAGTCCGGGGTTTACTCCACAGCCGATCCGCTGATTTGGCCCCAGGGCCGATGGCTATCAGCTCGGTGCCGAACGAGCCACGCTGGAGGCATACGCCAACCGGGCGAGGACGCTGCCGCAGGCGGCCGGGGCGACCAAGCCGCGCTCGGTCATCACCATGCCGATCGCCGTGCCGAGCCCAAGCGGTTCGCGGCCGTCCCGTCGAACGACCCTGCCGGTGCGCCGCTTCGGCTTCGCCGCGCGGGTAGCGCCGTTCTTCTTGTCGCCTCCCGGACGGCGACCAGGGCCTGGCGCGCAAGGTCGACCCCGCTCAGCTCGCCGGTCACGCGTGCACCGCCATGGCCGTGTCGCCGTCCAGCGGGCGTATAGCAAGGTCGGGCAGCCAGCCCCTCCACGGCACGGCCGCAGTCGTCTCGGTGCGGGCGGCGGCCTGCTCGCGCAGCTGCTCCAGGCGCTCGGCCAGCAGGTACTGCGCG # Right flank : GATTCCGCCGCGAAGGCGAAGGTCCTGCGCAACTCCAGGCTGAGCGTCAACGCCTCGCCGGAACCGGTGAAGAAGGACAAGACGATCACCGTCGCAGGCGCCCTGACCCGCGCTGACTGGGAGACCTACAAGTACGGGGGCTACACCAAGCAGCCGGTGAAGCTCCAGTTCAAGACGAAGGGAACCAGCACCTACAAGACCCTCAAGACCATCACGACGGACAGCGAGGGCAACCTGAGGACGACGACGAAGGCCACGGCGGACGGCTGCTTCCGCTACTCCTTCGCAGGCACGTCCACCACTCCGGCGGTCGCCTCCACAGCGGACTACGTCGACGTGAAGTAACCCTCGGGAGGGCCATCCATCCTCCAGTAAGCGCAGAAAGCTCAGGCCGGAGACCTTTCGGTCTGGGCTTTCTTGAGCCCTGGCCGTTTCCCGGTCGGCGGGCCGGTCGGCCACTGCATCCCTTCGCACTCTTCAAGCTGATCGACGGTCTCGGC # Questionable array : NO Score: 4.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:-1.04, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGGAGGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGGAGGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [12-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 7931175-7928942 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYEY01000001.1 Streptomyces sp. 2114.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================================================== ================== 7931174 28 75.9 61 .C..A.-.....CGA..........A... CCGGTCTTCTTCGTGAACCGGTCCACGGTCTCGTCGATTGGCGCGTCCCGGTCGCTACCGG 7931085 29 96.6 33 ............C................ GCAGCCATTCCTGGTCAGCGGCGATATCCGGAC 7931023 29 86.2 32 ............CGA..........A... ATCATGGTGCAGCGGTAGCCGTCACGGCGCTT 7930962 29 75.9 32 ..C...G.....CGA....G.....A... TTCTCGTCCAGCAACCACTGATCGACGATGAC 7930901 29 82.8 32 ..C.G.......C.........C..A... TTCACGCAGCGGGACATGCAGTTCGCCGAGCT 7930840 29 75.9 121 ..C...G.....CGA.........G.T.. TTCCCGGCCGGGCAGTGCCTGCGAGGGGCCGTGGGGCCCGGTAGATTCAGGCGGGTGGATGACCGGCGTTCCTTGAATCACGAATTGGCAAAGCGCTTCTAACGGTGCAGGTCGCGAAGGG 7930690 29 100.0 32 ............................. GCCGCAGGCGTAGAGAAACGAGGAGCCCGCGG 7930629 29 100.0 32 ............................. GAGCAGTCGCCGACGACGCGGGGCCAGAGGAT 7930568 29 72.4 146 .......T..T.C...T....A..G.TT. ATCCTGGTCAGTTAGTGCCTGCGGGGAACAGTGTGGCCCGGTAGATTCAGGCGGGTGGATGACTGGCGTTCCTTGAATCACCAATTGGCAAAGCGCTCCTAACGGCGCAGGTCGCGAAAGTTCGCCCTGCTGTGGGGGCTGTTGGA 7930393 29 93.1 32 ............C...............T TCTCCGGGGGTCACCTCCGGGCACATAGAGAC 7930332 29 93.1 32 ...T........C................ TTCTACGTCGAGGACATCGGGCCGCACGTACG 7930271 29 100.0 32 ............................. ACCCTCTGGGGTGTTCCGGCGGAGGCTCTGGG 7930210 29 93.1 32 ..........T.C................ ACATCACCATGCGGGACTGCTACGTGGGGCCG 7930149 29 86.2 32 ............C........A..G.G.. CCGAGGGCCGCCGCGCTGTTCGGCATCGAGTC 7930088 27 86.2 31 ......-...G.A-............... ACGGTCGGGCAGATCCGGCAAGGTGTCGCGG 7930030 29 86.2 31 ...T....T............A..G.... CCCCGTCCAGCAGCAGCGTGGCGGTACGCCC 7929970 29 93.1 31 ...T.....................A... GAGGTTTGGTTGTACGACTTCCTGCGGGCCG 7929910 29 86.2 32 C......T....C...........G.... GCCCGCTACGACGTGATGGCCATCGACCCGGC 7929849 28 69.0 32 ............CCC.T..-.A..GT..C TCGAACCCCGCCCGCACGGCCAGGAGCCGAGT 7929789 29 79.3 119 CG....C.....CCT.............. ATCATGGTCTGCCCGGCGTCGGCATCGTCGAGCTGCCCGATAGATTCAGGCGGGTGCATGACCGGCGTTCCTTGAATCACGAATTGGCAAAACGCTCCTAACGGCGCAGGTCGCGAAGG 7929641 29 89.7 32 ............CT...........A... GACCTGCGCGTCCTCGACCTGCACACCCTGGC 7929580 29 89.7 32 ............CT...........A... GAACGTCGAGAGGATCCGCTCGACGAGGTCGC 7929519 29 86.2 32 ............CT...........A..A CCTCAACAAGTTCGCCAAGCAGCTCCGTACCT 7929458 29 89.7 32 ............CT...........A... TCGAGGGCGCGGGCGAGCGCCTTGAGGTCCCG 7929397 29 86.2 32 ............CT...........A..C CAAACCTGCTGGGTGGGCCGGGGCGCCCGGGT 7929336 29 89.7 32 ............CT...........A... CGCGCCAACCGCAGGGGAGACGGACATGAAGG 7929275 29 86.2 33 ............CT...........A..T TCGTCGGCGTATACGTGGAGGCGAACGCCATCA 7929213 29 96.6 32 .........................A... CCAGCCCATCGGGAGGCGGATGGTGATGGCCG 7929152 29 93.1 31 ............C...........G.... GCGTCTGCTTCTCACTGGGTTCGGCGGTGAG 7929092 29 100.0 32 ............................. CTGACGAGCGGGCCCTGACGATGGCCGACATC 7929031 29 96.6 32 ..........T.................. GTGGCGGCAGCGTGAACGCTCGGTCATCGCTC 7928970 29 86.2 0 A..T.......................AT | ========== ====== ====== ====== ============================= ================================================================================================================================================== ================== 32 29 88.2 42 GTGCTCTCCGCGGAGGCGGAGGTGAGCCG # Left flank : AGAGGTTCTCTTCACCGGATTCGGCCTGCATCAGGCAAAGGGCGGGGATGCTGAGGTGTTCGCCGGGAGTGTTTGCCATGTTGCCGGCCAGGAGGTTCAGCGTTTTGTGGCCGCCGGCGAGTGCCCTGACGGCGCTGGTGTCGAGGATGATCACGCTGCGGTGCCCCGGGCGGCCCTGACTTTCTCAGCGGCGATCTTGTAGATGTTGCCGAGCACGTCGGGGGCTTGCTCGAACTCCTCCTCGGGGATGTCCACGCCCATCATGCGGCGTACGACCTCCCGGTCGGCGGCCAGCCGCTCTGCCCGCTGGGCTGCCGTCGGCTGCTGGGCGGCGAGCGCTTCGACCAGCTGGCCGATGCTCACGCCGCGCTCCTTGGCGAGCTCGGCAAGGTGATCGCGGGTCTCCCGCTGTACCTGGATCGTCGTCGAGGCCATAGGTAGACTATAGAGGCTTTACAGTGGCGGCGCCTCCGGGAAGATGAGCCGGGCAGAAACGTGCA # Right flank : CAGGACACCGCACTGGTCACGGCGAGTTCTTTAGCCAGATGCCGGCGCAGACATTGCGGTGCGGCAGCGCGTCACGGCCGCACCGCACGCCGCCAACACCGGAGCAGGTTGCCGCTCCAGCCGCTTCGCCAGGGCGGGACGCTCCACTGCCACCAGGGCGGCGGCTGCTTCGGTGCGCCAGTTTTGCGCAGGCCTCGCGTTCGTGCTGTGCTCGCCGCCCGCTATCTCAGTTCTTGCCCCGGGCGGGGTTCCGCTTCGCCCATGGCTGTTGAGCGATGCCGCGGTCCTTCATCTGCGCCACGACCTTGTCATGCCACTCGCGCAGCCACTCCAGGTCGACCGGTAACGGCAGGGTCGCCACAGTGGCGCCTTTGCGGCGGGTCAGGGTGGCATCCAACTGTCCGTTGCTCGTCTCCCACACCCTTACGGCCAACGAGGCCCGGTTGGTGTGCACAGGGACTTTAGATGCTTCCTGTTCGACGATCATGCGAGTGAGGTTG # Questionable array : NO Score: 3.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:0, 6:0.25, 7:-0.84, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGGAGGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCTCCGCGCAGGCGGAGGTGGTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [12-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 7944769-7943747 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYEY01000001.1 Streptomyces sp. 2114.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================================= ================== 7944768 28 85.7 33 ...TTA..................G... GACCAAGGACGCGGCGACCAGAGCGCGCGAAGG 7944707 27 78.6 28 ....T...........T.-..CC..C.. CCGGCCGACTCTCGCCGGACGCTGAGGA 7944652 28 82.1 119 ....T....A..............G.TT GATCCTGGCCAGGTAGTGCCTGCGGGAGCCGTGTGGCCCGGTAGATTCAGGCGGGTGCATGATCGGCGTTCCTTGAATCACGAATCGGCAAAACGCTCTTAACGGCGCAGGTCGCGAAG 7944505 28 100.0 33 ............................ GATGCGCGAGCTGAACAGGGCTAGCGAGGCCAA 7944444 28 100.0 33 ............................ GTGGTGCTGTGTTGCTCTCCGATGATCCCACGG 7944383 28 100.0 33 ............................ GGGCGGCCGCGTGCTGGTGCTGCTGCCGACTCT 7944322 28 100.0 33 ............................ GCAGGCGAACGAGCGCAACGGCGACCAGCTCAC 7944261 28 100.0 33 ............................ CCGTCACCGCACGAGGAGAGAGCAGTGAACGAC 7944200 28 100.0 33 ............................ AATCCAGGTGTCCGCGAACCGGCAGGCCGACCG 7944139 28 89.3 32 ....T.......A...........G... GCTGAGAGCCCCGCGGTAGCGAGGCCCCAGCA 7944079 28 85.7 33 ....T.......A....A......G... GTGGCTGCGCCGGCTGGCGGCTAAGGACCAGCA 7944018 28 85.7 33 .C..T.......A...........G... GGCCGAGCAGAGCATGGCTGCACAGCCGACACG 7943957 28 89.3 33 ....C.......A...........G... ACGACCGCCTGGGGCAGCACGCCTTCGAGGACC 7943896 28 96.4 33 ....T....................... GTCGGGCCCTGCGCACTCTCCGCGGCCGGGCGG 7943835 28 89.3 33 ....T.......A...........G... GTAGTCGGTCACCCGCTTCGGCCGGGGCGGAGC 7943774 28 85.7 0 ....T.......A............A.T | ========== ====== ====== ====== ============================ ======================================================================================================================= ================== 16 28 91.7 38 GTGCGCTCCGCGGAGGCGGAGGTGAGCC # Left flank : CGGATCCGCACGGAATCCAGCCAGGGGGTCACCGCCTGGGTTCATGACGGCAACACTTCCTGGGCCACGATCGTCGCTTCCGAAGCCGGCCGAACTGTGGCCTACCAGGGTGGCCCGCGGCGCTTGGCCACCGAGCTGGGAGAGGCCTGGCATGCATGGGAGACGAGCGGCGCTCCCGGTCTGTACGACTACGGCATGACACGTACTCCAGAGGAGCAGTACCTCTGGAGCAACGATCCCGACACCGGCCCACGATGGCCAACAGCCGCACCTCTGCTCGGCACTGCCAAGCAATAACCTGCGCCAGCCTGGGTGGTGCACTGCCCGGTCCAGCCACTCCTGTGAGCTCGGCTGTGGCTCCACCAGGATTCCACCAAGTGCTCCCCGTGCCCGAGGGGATGGTCCCCGCGGCGCGCAACGCAGCCCGTGTGTCGAAGGCCTGCTCCCCGCACGCGCGGAGGTGGGCCGGCGGCGGCAGAGAGACTACGAAGGCGGCGACA # Right flank : GCATGGTTGAACCGCGGGCTACAGGCCGTTGGTGTCCAGGTCGAGGCCGAATGGCTCCGGGATCCGTACTGTGGTGCCGTAGGGGTGGGGCCGTCTGCTCGTGTGTAGCCGAGTTGGCATGGCTCCGAGTACAGAGTTACCGAACGCTCTTGACGGTCGACCAGTAGGTAGAGCGGCGCCCCGTACTCCGCGTACCGACGGCGTTTCACTTTCCGCATTGGACTCGCTGGTGACCTCGACGACGAGGAGTGTGTCCGAGGGCAGCAGTGCACCAGCGCCCTTTGCGACCGCGGCGGGTACCACCGCGATATCTGGTACGTACCAGTTGCTGGACCCGGGCAGGTCGAGGTTGCCGGAGCCGGTGACGCAGTCGAGTTCGCGGGCGCGGGCTCGGATCTGGTCGCGGATCGTCTCCGCGGTCGTTTCGTGGTCCCAGGTCGGTGACACCGGCTCGATGACGCCCTCGACGATCTGGGCGCGGTCGCCGCGGATGTGTTGGA # Questionable array : NO Score: 4.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:-0.50, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTCCGCGGAGGCGGAGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTCCGCGGAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [15-15] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 7946675-7946366 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYEY01000001.1 Streptomyces sp. 2114.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7946674 29 100.0 32 ............................. GCAGGCAACTTGCCGCTCATAGCAGCCCCGTT 7946613 29 100.0 32 ............................. GTGCCGCGCTGGGACGTCCGGACGTAGCCCTC 7946552 29 100.0 32 ............................. GCAAGGGAGCCTTCGTTCGCGATCCGGCAGAC 7946491 29 100.0 32 ............................. AACACCACCGCGGACGTGAACACGCCTACCTC 7946430 29 96.6 7 ............................C ATTCCTC Deletion [7946395] 7946394 29 79.3 0 ............C......G.A..GT..C | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.0 27 GTGCTCTCCGCGGAGGCGGAGGTGAGCCG # Left flank : TTGTCATGGTCGAGCCTCTGCTTCTCGACTCCCGCGGCATGCGCATATCCAGGGTCGCTCACGAGGTCGGCATAGGCCTCCCGCGCCATGACCTGAAATGCCGGAATGATCTTTCCGACGTCATGTAAGCCGGCCCACACACTCACCAGGCCCCGAACCTGCCCCTCGCTAAGGCCCACGGCACCAGCCAGACGCGCTCGCGCAGCATCCGTCAAAACCCGGTCCCACAGCACACCGGCAACCGCCGCAGTGTCCAGCAGATGACAGATCAACGGATACCGACGTGCCAGCCCCCGCTCCTTACCCCACAACCGCCCATCGACCACCGGCTCCGACATAGCCCACCCCCATCACGACGCTGTGACAGCAACAGGCATACCAGCGCCCACTGACAACGCCCCCACACAGCGCTTCACAGCGGTAGATTCACGCACATGCACAACCCCCGCCCCTTGAGTCAAGAAAACGCAAACCGCCTCTAACGCCGCAGGTGGCGAAGG # Right flank : CCGCTCAAGGCGGTGCGGGTGCGCAGGGGGAGCGATCGGATTTGGTCACGGTCCGCGATCGACCGGTGTGCGGCGCCGGTTGTGCGCCACGATGGCCGAGGTTGTTGTCTCGAGGAGGAATGTCCGTGGGTGACCACCGTAAGTCCGATCCGGATCCAAGCCAGGGCAAGCCGCCGCCTGGGAACTCTGACGGGAAGGTGCCCGACCCGCCGCCCCCGTCGGGAAAGCGGCGGAAGTAGGCGTCCTCCATGTCTGAACTCTGCGAGCTCCAAGGCCGCCTGGAAAGCGCCATGGAGGCCCAAGGCATCTGGCCGGCGGACTCGCCCTGGGTCCGCCGGGCCGCGCAGGATGCTCCACGGCACGCCTTCGCCCCAAATCGCGTGTGAGATTGGGACGGCGACATCTACGCCCCGGTCGACCACGCTAGCGATTGCGCTCGGTGGGCGAGCCTCGTTTACGGCGGCGTCTACGACTCCACCATCACCCAGGTCGCCGACGGC # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.52, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGGAGGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGGAGGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 7956236-7956636 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYEY01000001.1 Streptomyces sp. 2114.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 7956236 29 100.0 39 ............................. AACGCCCCGCGCGTGGTGCTGTTGTTGTGGACCTCGGTG 7956304 29 100.0 32 ............................. ATCGACAGCCACGACCTGGGCGAGAAACTGGG 7956365 29 100.0 31 ............................. ACGAGCGTGCCGAGCTCGCGGAGGTACTTCA 7956425 29 100.0 32 ............................. GCTATCTACGATTCCGCGAACCTGGACGACGA 7956486 29 100.0 32 ............................. GGGGCGAGGCGCACTTGAGGTTCCGGGGCGTG 7956547 29 96.6 32 .....G....................... AGGTAACGGGAGGCGGTGGCCAAGTGCTTCTC 7956608 29 96.6 0 .....................A....... | ========== ====== ====== ====== ============================= ======================================= ================== 7 29 99.0 33 GTGCTCTCCGCGGGAGCGGAGGTGAGCCG # Left flank : AGCGGCTCCTTGAACCCGACTCCGCCGCGCAAGAGCCAGAGGACTTCGAGGACGAAGTGGTGGACCTGTGGGACCCGGTAACGGGAGCCGTGCCCGGCGGCGTCAACTACGCCGGCGCACGCGAAGAACCCGGCGCGGCAGGCCGGTGACCCATGCCGTCAATGATCACCCTGTCCGTCACAGCCGTCCCCGACCACTTGCGAGGAGCACTGACACGCTGGCTACTGGAAGTCACACCTGAGCTATACGTCGGAACGGTATCGGCAAAGGTCAGAGACGAACTCTGGGCAGCTGTCACCGACTGCACAGGGGACGGACTCTCGGTAATGGTCTATCCGACCGACAACGAACAAGGCTTCACCGTGCGGATCTCCGGACACCGCCGCCGCCACCTGCGTGACTTCGACGGGCTCACGCTGGTCGCCTTCAGCTCACCACCCACAACGGGAAAACCAGATCACGAAATTGCAAAGCAGCTCTGAAAGTGGAGGTCGCGAAGG # Right flank : GCGCCGGGGCCGGTACAAGGCGCTTTCCGAGGCGTGCTCTCCGCAAGCGCGGAGAGCACAAGGTGGGCTGGGTTCCGGTCGTCGGCCGCGGCTGCTCACCTCCGCCTGCGCAGAGAGCACCGGGCAGCTGGACGGGAACAACCGGACCGGCCGGCTCACCTCCGCCTCCGCGGAGAGCCCCGTATAGGACCACCCCCACGCGTGCGGGGAGCAGGAGTCCGGAGCGAAGCGGCCGTCACCGGAGGTGGGACCATCCCCACGCGTGCGGGGAGCAGACTTCGTGACCTGCATCGTTCCATGCGCACCACCTGGATTTGAACCACGCGGACGTCCGGCTCGGGGCCCTCTCCACCGGTCAGGGCAGGTGGAGCTGGCTGCTGGCCACGCGCCGCCGACGAGAGCACCTCCGCGGATCCAGAAACACAAAGTTCCTCAATTCCGGCCTCGACGCCAGGGACGACACCCCCGCGAGGCGGGGAGCGGAACCGCATGGTGGCCGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGGGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGGGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //