Array 1 20189-16800 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000099.1 Microcoleus sp. LEGE 07076 NODE_179_length_23658_cov_3.62046, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 20188 37 97.3 37 .......................G............. CCTTGGAGACTTTAGAGGCTTCCAATCCAAATCCAAA 20114 37 94.6 36 .......................GG............ TCGCGCAAGGTTCGATGCGCGGTTTGTCGTATATCT 20041 37 100.0 34 ..................................... TTGAGATTGGGCGAGCGGACGAAGTAATTGCAAA 19970 37 100.0 37 ..................................... CCGCTAGCTAATTTAAACCCAAGGCTAGGTAGTTAAT 19896 37 100.0 37 ..................................... CGAGCGACGGGCTCAATCCTTATCAAACTTGGGCAAA 19822 37 100.0 41 ..................................... CTCGTTTACCTACGTTCCTGCAAACTGATGAAAAAATTAAT 19744 37 100.0 35 ..................................... ATTAAAATATTTCATTTAATCAATTGCGATCGAAC 19672 37 100.0 37 ..................................... ATGACTCTTTCCCGACGCCAGGGGCTGGCAAAGTGGG 19598 37 100.0 37 ..................................... GTTATGGTTCGAGATTGGTGAGAGTGACGGAAGAATA 19524 37 100.0 42 ..................................... TTTTGAGCATTGTTGTTTTGCTTTGTGTATGCTTGATTATGA 19445 37 100.0 39 ..................................... TCATATTTCCCTTTGCCGTCGCTTCCCTTTTGGCTTAAA 19369 37 100.0 38 ..................................... CATTTCCGCCCTCGAAACCCTGCTCAGTGTTTATGGGG 19294 37 100.0 39 ..................................... TTTTATGTCAAACCCACTTCTTTACGCCTCAATTGGCAC 19218 37 100.0 40 ..................................... CGCCGCCATTCTGCGAGAAATTCTTTCATGCCGTGGTTGC 19141 37 100.0 35 ..................................... CTTAGGCATTTTCTTCTCTTTGGTTTCCGGCTCAT 19069 37 100.0 40 ..................................... TCGCGATCGAATACTGGGCAAGTGGGCACACGTAGACCGT 18992 37 100.0 37 ..................................... CTCTACGAAAGATTGATTGCCTTGCATCGCTTCTAAT 18918 37 100.0 41 ..................................... ACTTCAGCTTCCCTCTGCTTGATCAAAAGTTCGATCGCTTT 18840 37 100.0 36 ..................................... TTAACCTCTAATGAAGGTCAACGCCATGAATTTTAA 18767 37 100.0 37 ..................................... CGGCACCGAAAGATCCCGACAGTTGGCGGACACCGAA 18693 37 100.0 41 ..................................... TAGCTTCTTCTATTCTCTTGGCTATGTCGAGAGAATATTGA 18615 37 100.0 37 ..................................... CCATCGTAAGGACTCCTAATGGTAGTTAACTTTGCAA 18541 37 100.0 37 ..................................... GCATCAACATCTTTGAAGTCGCCGTATGCTGTGATAT 18467 37 100.0 37 ..................................... TCGCTATTAGTGTTGCCAGAAAACCTCAACCTGAATA 18393 37 100.0 35 ..................................... TGAAATAAATCTGATCGAAAACCCAGACTTAGCAC 18321 37 100.0 39 ..................................... TCTAAGAGCGCGGGTTTAAGCGCGTCCAGCACTGTGTAA 18245 37 100.0 37 ..................................... TAGTAACCGCTAGGCGTTTTCTAGGGGAGATAGACGT 18171 37 100.0 38 ..................................... TCAGACCAGTGACCGACAGTGCCGTACTGTGAAGAAAG 18096 37 100.0 35 ..................................... TTGAAATGGCGCTAGTAAGCTGCCGACCGAATCGG 18024 37 100.0 36 ..................................... AATGGATTAGGTTTGCTAACAGTTTATGCTCTCAGA 17951 37 100.0 38 ..................................... CTTGGCGAGGGTGTGGTCAGGGTTAGAGATTCCTACAT 17876 37 100.0 39 ..................................... CTAACCCTCGCCAAGCTTCACCTCTTCCCAGTCCCGCTG 17800 37 100.0 35 ..................................... TTGATGCTTTACCTGATTTATATCAAGTAAGAACA 17728 37 100.0 36 ..................................... GCAATCGCGCACGAGCAAAAAGAATTCGCGTACAAA 17655 37 100.0 34 ..................................... CCTCATCGGTTCGTCCATTGCTTCGAGAATGCGA 17584 37 100.0 41 ..................................... GAGTTCGAGAGAAACCTATTAAAGGAGCGCACCCAAGCGGG 17506 37 100.0 36 ..................................... TTCTGTTGAATCTTCTGCTGAATCTTATCTTGAATG 17433 37 100.0 36 ..................................... GATCCTATTATTCTGCACAAGTACAGATAAATTATC 17360 37 100.0 38 ..................................... TCACTCCTCCTCGCCCGGTGTCCGCCAATATAAAAAGC 17285 37 100.0 40 ..................................... CTGAAATCTCGCAACACTAAATTAACAAGTGCGTCTACAT 17208 37 100.0 34 ..................................... ATTATCATAATAGGTAATCCAGTTGTGTAAAGAA 17137 37 100.0 40 ..................................... TTTAGCTTCAACACTCAAACAAGAACACAAAATATGGTTT 17060 37 100.0 38 ..................................... TCTAATTCAGTCTCTGTAAAGGATACAGCAACTGATCT 16985 37 100.0 36 ..................................... TCCATAGTTCAACGTAAAATAAATTGGTTGAGCTAC 16912 37 100.0 39 ..................................... CCAACACGATCGATGTGTCCGAAGATTTGAGCTTGGGGA 16836 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 46 37 99.8 38 GTTTCAGTCCCGTTGCCGGGATTCAGTTAATTGAAAG # Left flank : TTAGCAAGCGGATGCACTCGGGAGTTGGTGCGACGGGGGCGTAGACTAGAAGGCCTTGGGGTTCTAGTTTAATTACTGTCATCCGCACCGGCACAATTACGTAGAAAATGCCTTGGAGTTGGTCAAAAGTCCAGATGGTGTCTTTGACTATTTCTTTGCGGATGGTGCGCCGCTTGCTGTAGGGATAGATTGGGACGATCGGCCAAAATGGCCAGGAATAGTCCCGATTGTGAATCTGTGCTGGTGTTGGTGTGTCTTGGCCCTGTGTCACTCCGCGACTCCTTGCCGATTTTTTTTGTACGTGCGTGCGATCGAACTTTTGTTATCTTATTTCAATTTTGGGATGCCGATTCGAGCAGTTGAACAGGGGTTAGGGGCGATTCTTGCTGGGGATAGCCGCGCTGCGGGTTTTTGGAATATTCAAAGCTGGAATTGCCCGTGGGGAGCCCAAACCCGGTTTTTACGAGTTTTGGGATGAGTCAGGAGAAATAAGAGGATGA # Right flank : GCCGCCCCCCAGAACCCAGTCACAGAGAGCATTCTGAAGCCGATTTTCGTCAACCTCAATTTTACCTTCATTACAGCCCCGCTTATTGCTACGCATTCGCAACAATTCAAACGACCCAAACGTTGAAACTATTAACTTGTCAAGGTTCTGGCGTTTTTCGTCAACCTCCACAAGATTTGCCCTCACTTCGGTTCACGAAAATCATCATAGATCGATCGCCATTATCTGTCAATCAATTTGAGATTAAAAATTGTAGAATCGACCCCAGCAAAAAACCCAATTCCCAGACAGCGCGATCGGGTTTTTCTATTTGAGGTCGATCGACCCTACCTACATATTAATAAACAATCGCCCCTTCCTCCCTAGGCTTCTCGCAACCGTAAGTAATTGTCCGCTTCACCGAACCCGCATCCAAAACATAAATCCGCACCGCATCCTCCTCCGGCCTAATCAACTTTTCAATCTTCTGCTGAAGCTTCACAAACTGCACCGCCGTCAAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCCCGTTGCCGGGATTCAGTTAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA // Array 1 1447-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000111.1 Microcoleus sp. LEGE 07076 NODE_207_length_22060_cov_4.6394, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 1446 36 100.0 38 .................................... GTGATAAGAGAGATTTACAAATAGGACATAAGTATAAA 1372 36 100.0 47 .................................... GTCATAACCCACAAGCTGCTTTTTCTCCAGCGTTATGAGCCTCTTCT 1289 36 100.0 39 .................................... CGATTTCTTCTTTTGATGCGTTTGCGTGGGCAAACAAGC 1214 36 100.0 37 .................................... TGTAAGGTTAACACTAAAATTATTCAAGACCTCTTAC 1141 36 100.0 39 .................................... AAGAGTTTTTTATAGCTAGTATTATATTCAGCATCATGA 1066 36 100.0 41 .................................... CCCGCTGATGCACTACGACCTTTGTTGGCTTCTTTAATTTA 989 36 100.0 49 .................................... ATATTACCAGCACCAGTAGAAGTTTTATGGAGAGCAAAAGACTTGACTC 904 36 100.0 42 .................................... TTCAGCTATTCGTTTAATACGTCTAAGACCAAAGACATTATT 826 36 100.0 34 .................................... GAAGATACGCAAGAAACAGCACCAATTACCCTAG 756 36 100.0 34 .................................... TTTTCTCTTAAGAGTAATTCTAATTTATCACTCA 686 36 100.0 44 .................................... TCTTTATTCAGAAATGAGTTTTCAGGGTAGAACTCCATCCGAGG 606 36 100.0 35 .................................... CAAGGATGGGAATTATCTCGAAGTTCAAAAAATCC 535 36 100.0 43 .................................... TATAGTTGTCTGTACTGCTGCTTTATTCTCCCCTGCCAATCTA 456 36 100.0 40 .................................... TCTAAAATCTTCCGGTGCTGCCCCTTCTGAGGGGAGTTGG 380 36 100.0 39 .................................... TTCATCCCAAAGAAATGCACCAGATGTAATTTCTTTAGT 305 36 100.0 35 .................................... TGGAAGTCACTTAGCTCTCAACTACCCTGACAATT 234 36 100.0 41 .................................... GTTTCTATAGGAGATAGAACTAAGTACAAATTGGGTCTTTG 157 36 100.0 38 .................................... ACTAATCTTATTTTCTTTAACTTTAAAATTAGCAGGTT 83 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================= ================== 19 36 100.0 40 CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Left flank : GCTTTATAAACCTTACCAAATTCGTTAAACCTTGCTTTTCTATGTGGTGATTTACGATATTCCTGACAACAAACGGCGCTGTAAAGTGCATGATTTGTTGTCAGGTTATGGGACTTGGGTGCAGTATAGCGCTTTTGAGTGTGTGCTCAGTCGAGCTAAGTTTGATGAATTACGATCGCGAATTGAGCAAAAGGTAAATCTCGAAGAGGATAGCATCCGGTTTTATCCGGTGTCGCGCCATACTTTGGGACAGGTGGAGGTTTTGGGAGTGGGGGCACCGATCACAAAAGCACCTCGATCGGTGATTATTTAGCTAATGCTGCGAGGCTGGCGGTAAATTAGCTCAAACGACCTTTTTTCGTCGGGAGCCTCGCAGGTATACTGGGCAAGGGTTTCAGATATTATTTTGAGCGGACACAGGTGTGAGTTTGACAAAATTTATCTGAGCCTCGCAAATGGCCTCTAGACACCTTGCGCTGTCTTGGGTGTATGATAGAGGA # Right flank : CTTCAATTGAGTGTTACTACTTGGCTTTAACATCTATCTACGACCCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 10550-4265 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000057.1 Microcoleus sp. LEGE 07076 NODE_108_length_33004_cov_4.30356, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 10549 37 100.0 41 ..................................... TCAGTCATCCCTTCTCCAAATGATTGGATTCCCCAATCAGA 10471 37 100.0 35 ..................................... TTGGAGATTTCGCTGTTGCGGAGAATTCGATCTAG 10399 37 100.0 35 ..................................... TCGATCTGCTGTTGCGGGTACAAGTCCACAAAAAA 10327 37 100.0 35 ..................................... ATGCTTGGGCTATTCGGGCCATTCATTTAGGGCTT 10255 37 100.0 39 ..................................... ACGCTTCAGGCATCCCTCTCTACAGCCTTTACAATTACA 10179 37 100.0 35 ..................................... GTAGCAATGTATAAAGAAAGGAAGAACATATCAAT 10107 37 100.0 35 ..................................... AAAAGACCCTAGAGATACTAACTTCATGTTTGCAG 10035 37 100.0 33 ..................................... GTAATTTTTGGTCGCTGCAACTTCCTTTACAAC 9965 37 100.0 35 ..................................... CTGTCCCTGCAATTCTCTGTGATGGCAGCACTGTT 9893 37 100.0 33 ..................................... CGATTTACGGAATGGGGGAATATTCAGCAAACA 9823 37 100.0 32 ..................................... TACTTTCTGATGAAGGCTTTTCAACAACTCAA 9754 37 100.0 37 ..................................... GAACAACTTAGTCCGTTGCTCGAACCATTTTTTTAGA 9680 37 100.0 38 ..................................... GGAGAATCATTTTTGCAGTCTAACGAAACCTTTATAGA 9605 37 100.0 37 ..................................... TTCCTTGAATCAGAGACAGACTCCATTCCTTCGGAAA 9531 37 100.0 37 ..................................... AGAACGAATGCAATTTCAGCAAAAGTTGCCCACTGAA 9457 37 100.0 41 ..................................... ATGAGACAAGCAAATAAAGCTCGTGAGGCTGAAATTATGGA 9379 37 100.0 38 ..................................... CTATAAAGGCGATCGATTTTTCTATATCAAGATGTAGG 9304 37 100.0 34 ..................................... CTGTACCCCCCCAACGCGCCCAACACAACATCAA 9233 37 100.0 37 ..................................... CAGGACTGACAACTTGGAGCATACAAACCCATTTCAT 9159 37 100.0 36 ..................................... TTAAAATGTTAGCGATGCTTCTTTCTTTTCATTTGC 9086 37 100.0 34 ..................................... GAAAATTTTACACTCGCCGAAGCGAGGCAGCCAA 9015 37 100.0 37 ..................................... AATTTCCTTACGATAAGAGAAAAAGCAAGCGCAGGAA 8941 37 100.0 39 ..................................... TTTGAAATAGGATGAACAGTCATTCTTGTACAAACAAAA 8865 37 100.0 33 ..................................... ACGAGCGCTCATGGCACTATTTGGTAGCAATAT 8795 37 100.0 40 ..................................... AGAATCTTGCACACAACCAGAAGTTTTGGAATTAGACAAA 8718 37 100.0 41 ..................................... GAAAAAAGGAGAATTTTACCCATCAGAAATAGCGAAAAAAG 8640 37 100.0 36 ..................................... TTGCACTAATTAGCTTATTCATATAAAATCTTTCAC 8567 37 100.0 37 ..................................... AAGCACGCAAGACCCTAATAATGTTGTCCGACATTCT 8493 37 100.0 45 ..................................... GTATCATGTTTTCTCTCTGTTCAAAATTGCGAAATTTGTCATATC 8411 37 100.0 36 ..................................... GGAACATCGGCAACTGCGGACTTATGCACGTCAATT 8338 37 100.0 43 ..................................... GCGTGGCTACAAATATGAAGAAGGCAAGCTAAAAGTTTTCGGC 8258 37 100.0 40 ..................................... TTGAATCGCCAGAGGATTTATCGGATGTGGCCGCAATTGA 8181 37 100.0 34 ..................................... AAACTAGATGCTAATACTGTGGCGGCTGTGTTGT 8110 37 100.0 36 ..................................... AGAACCTGGTTTTCTTTAAACCAGAGACAGACTCCC 8037 37 100.0 34 ..................................... CATCCTCCCTATCCTGGTTGAATGGATTCGGAAG 7966 37 100.0 37 ..................................... GCTTGATAGAACTGATGCTGAAATCAGTCGAACGGTT 7892 37 100.0 38 ..................................... TTCAATGGACTGGGCTATGAAAGCTGCAATGGCTGCTA 7817 37 100.0 38 ..................................... CTATTTCACTAAAAGTATATCCAGATTCCAACAGCCGC 7742 37 100.0 36 ..................................... CACAGTTCAATTCATCAAATTTGCTCTGAAATTTTA 7669 37 100.0 33 ..................................... AAGCTTTTCATTGATTGAGGTTTATGAAAAATG 7599 37 100.0 37 ..................................... GTCTCCATCTCTGCTGGCAACTCCGATTTGGGGTCGA 7525 37 100.0 34 ..................................... TGCCAGTGCCAGCCACACAAGTAGCTGAAGTCTT 7454 37 100.0 33 ..................................... AAATAACTGGAGGCTGTAACTGTAGAAATCCCT 7384 37 100.0 33 ..................................... ACCAATATGTGACCGTTACGGCAGGGCCTTTCT 7314 37 100.0 36 ..................................... TTAATTAAATCCAAGCGATTTGCTAAGTTTGTCCTA 7241 37 100.0 40 ..................................... TTTATAGCGGCAGTAATTTGAGCTGGCGTAGCAAATTTAC 7164 37 100.0 35 ..................................... AAAACTTCCAAAACCTGCCGCCGCAATTTCCTTTA 7092 37 100.0 34 ..................................... GTTCGGGACGGGCATAATAAGCTTTTGCAATTAC 7021 37 100.0 34 ..................................... TTCCTTCCAAATATCTCGAATTATCTTTTTAAAT 6950 37 100.0 34 ..................................... GCTGAAGTCTTCGGATTCAGGCTCGATCAAAAAC 6879 37 100.0 35 ..................................... CGGTGACGGCACGATGATTTCATGTAGAAAACCAG 6807 37 100.0 37 ..................................... GTATTTATATTATAACGCGGTAGACCGCATAATAAAA 6733 37 100.0 31 ..................................... TGGCTATCACTGGAGTTAGCGACTCGGTTGA 6665 37 100.0 36 ..................................... GAGCAAAATGCTTGATATCCCGATCGCCCTCCTGAA 6592 37 100.0 33 ..................................... CTGCCATTTTTGGAATCTTTACTTGTAGTTCTT 6522 37 100.0 38 ..................................... TCCGAATGCGTTGTAATCGCCAATCAATTCAATGTCAT 6447 37 100.0 39 ..................................... TGTAATCTGCGGTAGTGATTGATTGTTTGACTATTTCAC 6371 37 100.0 34 ..................................... GTATCAACACGAATTGCAAAGACTTTCATTGAAT 6300 37 100.0 37 ..................................... AGAGAGTAGAGGACGCTAAAAACTTTCAAGTATCCTG 6226 37 100.0 41 ..................................... TTTAAAATCCTCGTAAGTAAGAATAACATCATAACGAGTAG 6148 37 100.0 40 ..................................... GATCGATTTGGCAGCATCTCCACCACTGGGAACCGATAAC 6071 37 100.0 38 ..................................... GAATTAATCCTTTTGTTTGAGAACGTATCTCTGCTACG 5996 37 100.0 40 ..................................... TTATCTGGAATAGCGGACATAAGCAGGTTAATATCTGTGA 5919 37 100.0 36 ..................................... TTATCTCTAATCTTTCGGACTTACCCAATACCCCTA 5846 37 100.0 35 ..................................... TCACCGTAGTGATGCCATTTTCCGGCAATTTTTAC 5774 37 100.0 43 ..................................... GTACTCGCGATCTTGTTTTGCGTGATGTTGCAATTGAATTTGG 5694 37 100.0 46 ..................................... GGACTTGAACAATAAGCAAACCAATACTCATTGCGCCGCAATAAAC 5611 37 100.0 37 ..................................... AGCCAAACCACGAAACAAATCACGCATATCAGTTTTT 5537 37 100.0 35 ..................................... TTGGCTCAAATAATCCACAATGTCTTCTATACGAT 5465 37 100.0 35 ..................................... CGATATTTCCGACACCTCCACATCCTTTAGGTAAC 5393 37 100.0 34 ..................................... CGGATATTAGGCAAGCGACCCGCTGCTAATATAA 5322 37 100.0 37 ..................................... CGATCGGACGGCGGGAAAACTTGATGTAATTGGTTGG 5248 37 100.0 34 ..................................... TTTCCTTTGATGGTATTAAAAATTGCAGCCAATG 5177 37 100.0 33 ..................................... TTAAGATTGAGTTGCTCCGATATGTTGAAATTT 5107 37 100.0 35 ..................................... AACAATGGAATAGTGTCCAACGCATTGGTAACAAC 5035 37 100.0 37 ..................................... CAGCGGGGTCTGAGCTTTTTGCATTCTTCTATGTAGT 4961 37 100.0 34 ..................................... CCGTACAAATCACAACTTGATAATTATTACAATC 4890 37 100.0 34 ..................................... GAAGCTTGAAAGGGCGCATAGAATGGAATCTTCG 4819 37 100.0 40 ..................................... GGCTACTGACAAGAGGCATTGGCACAAAACCAAATGTCAA 4742 37 100.0 39 ..................................... AAGAACGGGAAGTAGACGTGGCTGTATTTATTCGGCTAG 4666 37 100.0 34 ..................................... GTATGGTATGTCAAGCAACAATCGTCACGCTTCA 4595 37 100.0 34 ..................................... AAAGCATTGTAATCAAACGTACTAGGAGAAACTA 4524 37 100.0 41 ..................................... AATACTAAAGAAATGATTTCTACAGCTTATGGCATGGGTAA 4446 37 100.0 33 ..................................... GTACTCATCCATCAAGTCGCTAATAATTTTTTT 4376 37 100.0 38 ..................................... ATTTTAGGGGGATTAGTATGGCTGCTTTAGATCCTCGA 4301 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 86 37 100.0 37 GCCGCAATAAACCACACTCCCTACTAGGGATTGAAAC # Left flank : TTTGACGCTTATTTAGGCTACCTGCAAGTCTAGGGCTGCGATCGTTTTTTTTTTGAAAATTCCTATGGCTGGCTTGGAAATTTTATTTAGGCTACCTGCAAGTCTAGGGCTGCGATCGGGCTTGGCTAAATTCATCAAGCCCCCAGAGGACAGCATCCTATTTTTTCCGTTGTGCGCTTGCTGTCAAGGTAAAATTGAGCGTATTGGCGGGGTAGTGCCGATCGATCGAACTATTTTCTTTGCGTAAAAATTCGCCAACCTGTAGGTGTAAAATTTGGGGGGTCAAATTTTTAGGCTATAATCTATATAGAGTAAGGGTTTGATGCTCCCTCTCGGAAAAATAGGTTGGCGAAATTGCTAGAACTGTTGCTGGATAAGGATTTTAAGTTGAGGTGCGATCTATGGTATTGACAGAGCGAAAGCTGAAATGGTATTCTCTGAGGAGGTTGGCGAAACTGAACCTTGAAAACCAAATAGAGCAAGGGTTTCACACACCGGCG # Right flank : GCGCCCGCGCCCAGCACGTTTTTGCCGCCAGTGAAGCAGTTTGTATCAGTGCAGCAGCCGCAGCCGAGAGTTATTTGCGGTTCGATCGCATTCTGGAAGTTGCGCGCGAAACTAAAGCTGAAGCTATTCATCCGGGTTACGGATTTTTGAGCGAAAATGCGGAATTTGCCGAGGCTTGTGCAAGGGAAAATATTGCATTTATCGGCCCGACTCCGAGTCAGTTGCGGTGTTTTGGATTGAAGCACACCGCGCGGGAATTGGCCGCTGCAAATCAAGTGCCGCTGACTCCCGGAAGCGAACTTTTAGCAAGTTTGGAGGATGCCCAAAGGGCGGCTGGGGCGATCGGCTATCCGGTAATGCTCAAAAGTACCGCAGGGGGTGGCGGCATCGGTTTGCAGGCTTGTTTTGGCGATCGAGATTTGACAGAATCATTTGAAAAAGTACAGCGTTTGAGTCAAAGCAATTTTCAACAAAGCGCTGTTTTTTTAGAGAAATACATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATAAACCACACTCCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 4495-8679 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000206.1 Microcoleus sp. LEGE 07076 NODE_400_length_10038_cov_4.05822, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 4495 37 100.0 35 ..................................... CTGTCATATACGCAAGAAAGAGAAGTAAAAGCTTG 4567 37 100.0 32 ..................................... GGAATTTTATAATCCCTGAGCGCCACTTTTGG 4636 37 100.0 36 ..................................... CAGGTAAGTGGTAATTATGGACAGTTCTGATTCCTT 4709 37 100.0 34 ..................................... CTGTAGTTGCTGTTTCTGAATCTGATACTACCTC 4780 37 100.0 42 ..................................... AGAACTGGATTTGGGTGAGAAAAATTTAACTTGATCATTGGA 4859 37 100.0 32 ..................................... TCAAAGCTAACTCATAAGACATAAGCAATTCT 4928 37 100.0 39 ..................................... CTGAAACAATATCCTTTTCAGCGGATACTTTACGGTACT 5004 37 100.0 37 ..................................... GAGCTTCATGACCGACGGAATAGTACCGATGAGCCGC 5078 37 100.0 33 ..................................... AATAACCCGGTGAACAAGTTAAGCTGTATTGCT 5148 37 100.0 35 ..................................... TGATTAGCTCCCTACTGAATGCTTGGCCAGCGGGT 5220 37 100.0 35 ..................................... TATTAGTAAAACTAGATTAGATGCAGGAAGTGTAG 5292 37 100.0 35 ..................................... GGAAGCGAGGCTTTATTTTGTCTGGTAGTATTTCA 5364 37 100.0 33 ..................................... AGAGATTTGAACTTGCGGACACGCTGACCAAGA 5434 37 100.0 35 ..................................... AATCGGATGCGGATCGGCTGCACTTGTGTGAGCCG 5506 37 100.0 31 ..................................... ATCTATTTCCCCCGATATTTTGGCCCGTCGC 5574 37 100.0 42 ..................................... GGATTTTAGCCAGAAACTGGGAAAGACGCGGAGAAAAAACAG 5653 37 100.0 35 ..................................... CCGCGCGATCATTCTCAGAACGTTCGGTATCGGGT 5725 37 100.0 33 ..................................... TCGCCGCTCAGGTACTAGATTGTTGTCTAACGT 5795 37 100.0 41 ..................................... TGATAAACTCATCTGTCATGGCTTCAGCTTTGGCTACAGAA 5873 37 100.0 36 ..................................... GTGGTGCGGCTTGTTGGGCCGGTGCAGAATCTTCCA 5946 37 100.0 36 ..................................... AGATAAGCAGATACACTCCCGGAACTGCTGCACAGT 6019 37 100.0 34 ..................................... CCTGATAACAGCGATCGCCCGCAGTGCATCATGA 6090 37 100.0 34 ..................................... CAATTTATTGTATTCGGACAATTCAAGAGCGGCG 6161 37 100.0 40 ..................................... TAAATTCCTTTAATACCGCTTCCCCTATCAATTCATCTTC 6238 37 100.0 36 ..................................... CCGATCGTCCCGGTCTGAGCATGGCGTTCGAAATAG 6311 37 100.0 34 ..................................... ATCACGATGGCGCAAGTTTTATCGTAGTTAATTC 6382 37 100.0 34 ..................................... AAGTTTGCGGGTATATCAGGATTATCCGAGGGAA 6453 37 100.0 36 ..................................... TCAAACATTGTCTCGTTTTCGGGTTCTATGGGTTCC 6526 37 100.0 34 ..................................... TCTTATCGGTAGCCATAGTATGTTACTTCTCAAG 6597 37 100.0 37 ..................................... TGACCTGTGAGCCTCGGCTTCCCACTCTTTTCCTAAA 6671 37 100.0 38 ..................................... AGAAAAGCTTCCGTAAGAAGCGACTTCAAAGAATGCTG 6746 37 100.0 38 ..................................... TCTCGTTCGTAGTTTACCCCTGGGCATAAGGGGTGAAC 6821 37 100.0 37 ..................................... TACACCGTACTCATTCTGTCGAATCGCCCTACCCTTC 6895 37 100.0 34 ..................................... CTTGTTGACTGGTTTTTTAGCTACAACTTCTTCG 6966 37 100.0 39 ..................................... TTGATTCCGTAGTGACCGGAAACTCCGAGAAAACACCGA 7042 37 100.0 34 ..................................... CTACTACCCAAACGGATGCCAAGGATCCCGCATC 7113 37 100.0 35 ..................................... CGACACAACCCTGCCACACCCCTGTCGCAGAGCCT 7185 37 100.0 34 ..................................... GAAACAGCCGAATTTCCCTGGTCAATTCTTCCGC 7256 37 100.0 38 ..................................... GCGATCAACGACAATTATTGGATCTGCGATAAATTCGG 7331 37 100.0 31 ..................................... GCTCGGGAGAAGTTACGCCAGACAAATCAAC 7399 37 100.0 38 ..................................... GTGATAGATGGATTATTTGATTTTAAAAATTAGGGCCG 7474 37 100.0 35 ..................................... CTGCTAGATGGGCTAAATCATTCATTCTTTGTTGA 7546 37 100.0 41 ..................................... GCTAAAAGGTTGAACAGCATTTTCAACAAATCTAGGCTTAC 7624 37 100.0 35 ..................................... ATAAGTTGACGAATTTCTGTCGGCATTAAATTGCT 7696 37 100.0 33 ..................................... CTCGGATGTCGCTACTGTTAATTGCCGGAACTG 7766 37 100.0 32 ..................................... AAATTCTGCTTGCAGTGACACCACCAGCTAAT 7835 37 100.0 36 ..................................... ACATTATTATTGAGGATTTGATGAACTTACTGCTAT 7908 37 100.0 37 ..................................... TTGGCAATCTTCAAAGCTTTTCGCATCCTTAATTAAT 7982 37 100.0 35 ..................................... AGCCAGTGCGTGGGGGAATGGATTGTGAATTTAGA 8054 37 100.0 37 ..................................... TCAAAGGAGCGCCATTCAGGTTGTGACGGATGCCTTT 8128 37 100.0 36 ..................................... TTGCATAACCAGCCTTAAGAGATGACGTAAGAGTTT 8201 37 100.0 39 ..................................... TGGTCAGTGCCACATAAAGCAAATTATTTTCTTGCTCTT 8277 37 100.0 36 ..................................... ACGCTTCTTGACTTACCTCAAGAGCTTGCGTATTAT 8350 37 100.0 35 ..................................... ATCCCAGAGATGTATATTATCATTATCAGTGCTAG 8422 37 100.0 34 ..................................... CAATTCTTAAATCGACATCGGCTGTCATCTTAAA 8493 37 100.0 38 ..................................... ATAAAAGACTTCTCTGATTCCGAACTCACCACTCTCGT 8568 37 100.0 38 ..................................... AATTGATTAATCGCCCTTCTAGCGCTAATTCAAGTGCA 8643 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 58 37 100.0 36 GCCGCAATAAACCACACTCCCTACTAGGGATTGAAAC # Left flank : GGAAGACAAGCGGCGGACTAAAGTTCACAAAATTCTCAAATCCTACGGGCAGTGGATGCAGTACAGTGTGTTTGAGTGTGCGGATTTGAGCGAAACGCAGTATGCTAAGTTGCGATCGCGCTTGGCTAAATTCATCAAGCCCCCAGAGGACAGTATCCTATTTTTTCCGTTGTGCGCTTGCTGTCAGGGTAAAATTGAGCGTATTGGCGGGGTAGTGCCGATCGATCGAACTATTTTCTTTGCGTAAAAATTCGCCAACCTGTAGGTGTAAAATTTGGGGGGTCAAATTTTTAGGCTATACTCTATATAGAGTAAGGGTTTGATGCTCCCTCTCGGAAAAATAGGTTGGCGAAATCGCTAGAACTGTTGCTGGATAAGGATTTTAAGTTGAGGTGCAATCTATGGTATTGACAGATCGAAAGCTGAAATGGTATTCTCTGAGGAGGTTGGCGAAACTGAACCTTGAAAACCAAATAGAGCAAGGGTTTCACACACCGGCG # Right flank : CTGCCAAACTATAAAATTATTGGCTCAAAAATAGACTTCTTCTCACTCTGTTTATCTCCTCCAATAACCTCAAACAATCGATCGACTCCACACCTCCAAGAAAAATTCTCCACCGCGAAACCCGGACCCGCAACCCTAGCCTTTGCAGCAAGTTCAGGCCGTTCGATCGCTGTACACATCAAATCAGTCAAATGTTCCCACTCAGGAGCTAACATAAACAAAGTTTCCTCCCCAACTACCACAGCCGTAAATTTACTCTCAATCCGCAGTGCAAAGTCCGATCGCGTAAAATCATCCGTAGGGCCGCCCGCAGTACAAATCACCAGCAAACCGCAAGCAGCAGCCTCCAACACCGGTAGGTTAAAACCTTCAGCCAAATACGGAGAAACATAAACATCCGCAGCTTGGTAAAATTCAGCTATTTGAGCAAAAGATAGCTGATTGCCAGTATAAATTAATCTCGGTAAAACCCTCGCTCTTTCCGCATCGTCGAGCACAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATAAACCACACTCCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 41094-42057 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000033.1 Microcoleus sp. LEGE 07076 NODE_61_length_44802_cov_4.70131, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 41094 36 100.0 34 .................................... TATTGAGGGTAAGGAATATCCCCCACCCAAATAA 41164 36 100.0 33 .................................... AATGCGTCCATACGGGTCAGGGTGCGGTTTTGA 41233 36 100.0 40 .................................... TTTTGCAGAGACTAATTCTCCGCCGCCCATAAGTTGACTC 41309 36 100.0 37 .................................... ATTATCGACAGAGTTTCCAAAAATACTCTGTTTTAGA 41382 36 100.0 34 .................................... TAATAGGCAAAGCTTTCTTGGCTACTCATGCGTA 41452 36 100.0 33 .................................... GTTCGGTGGCATAGAACAGCCTCCTTACCCAAT 41521 36 100.0 32 .................................... ACTATCTCAATCCTGTCCCATTGCATTCATCG 41589 36 100.0 35 .................................... TTCAAGCCTTGCTGTTGCGGCATCTCTTTCTTGCG 41660 36 100.0 35 .................................... TTTTGGGCACTTTCTGACTTCTGACGCATATACAT 41731 36 100.0 41 .................................... TCTACCCCAACAACCTTCCCTTCTCCAGCCATTACAAAATA 41808 36 100.0 35 .................................... CTAGAACCGTCGACACCATTGGATTCTACGGCTTG 41879 36 100.0 40 .................................... GGGGTTTCCTTGGTCATCGTACCTTTCTATTTGATCGCCG 41955 36 100.0 31 .................................... TTTTTGCGGTTGCTACTAATTCAAGTGGATC 42022 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 14 36 100.0 35 CTTTGACTTACCACTTCCCCTCACGGGGATTGAAAC # Left flank : TGACGGGGGAACAAGAGGTTTATCGACCGATGAAGTGGGATCAATAATGGGTTTTGTAGAGTCACTCGGCGGTTGAAACCGCGTCTACACATACAAAGTCCGCCTTTGCGGACTAAGAGATCGAGTTTGAGCCGCTGTTGTATCGACATCAGCGGCTTTTTTTTCTGTGGTGCTTGACAGTTATCTAGGAGTCGGGTATCTTATTTGTCAGGTAAAAATCAAGTTCAACCTGAACCTTGACAAATTAATATTTTTCGTGTTATGGCAACCTAGCTGAGTTTCAGTTTTCGGTCTTGAAAAAGCCGGATTTGCTAGGGTCGCCAAATTGCTGAAACCCCGATTGTTTGGTTGACCCTAGCGGGTCGCTTACGCTGTAAGGGTTTGAGGCTTGTTAAGAGGGTCGTAGTTTTCAATAAATTTAGATTATTGGCGATCGAAAAGGGGGGTAGCAATTTTGGCTACTTGCATCCCTGATTCGACAAGAGTTTTAAAGTAAGACA # Right flank : CTATTCTTAACCTGAGAAATTACCCACGAGCTAAATTTTATAACTAAATAGTTATATATAGATATAGCCAAATAAAAATTAAATGAGCCGATCGCCCTTGTGTAGGGAAACGCCACTGCCGTGTCCTCTGCCGAAGCTCGATCGCCGGAGTTTTGCATATAATTGATGAGACAAAGGAGCGATGGGGCATGACACAGACGCGCTTAAAACCAAAAGACCAACGGCTAATTCATTCCGGGATTAGCTGGGAAGAATTTAAGTCGATCGAAACCGGGTTTGCGAACGCTCCGGGTATTCGGTTATTTTATTGGGGGGGCGAAATAGAAATATTGGCAGTTTCGCAAGACCACGAGTTTTTTAGCCGCACAATTGCTGGACTTTTGTTCATCTACTGCTTGGAAAAAGAGATTGAATTCGCACCTACCGGCAGCTTTACTCAAGAAAAGGAAGGTGTAGCATCGGCACAAGCTGACGAATCCTATTATATCGGCAGGGGAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGACTTACCACTTCCCCTCACGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.01 Confidence: MEDIUM] # Array family : NA // Array 1 983-45 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000066.1 Microcoleus sp. LEGE 07076 NODE_126_length_29235_cov_4.85712, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 982 36 100.0 38 .................................... TCTAATAGAAGAGAACTCGCTTCAATAGATAGTGTCAT 908 36 100.0 36 .................................... ACTATAAGTAGTACTAACAGTAGGAGAAGCAGTGGA 836 36 100.0 41 .................................... ACTTTACAGGGTTAACAATAAAGTGAGCAGTAGAAGTAAAA 759 36 100.0 46 .................................... TTGGGTAAATATCTAATATCTTTTCTCTTTCCTCTTCCTCTAAAAC 677 36 100.0 33 .................................... CTCTTCATTCTTGGCTAAGAGTAAGAGTCCTAG 608 36 100.0 40 .................................... TCTCTTTGATTTTCAGGTGAAACGTAATTAGGGATATGAG 532 36 100.0 42 .................................... TTTTACTATAAGTCGTAGCTTTGAAAATCATCCTACTATTGG 454 36 100.0 36 .................................... ATCACGGGGAACCCTTTGACCTTTACCAAGGTCTCG 382 36 100.0 43 .................................... ATCTAGTAAGAGCATTCTGACTTCTACTGTGTTCTGGTCTGTT 303 36 100.0 41 .................................... TTGATGGCGCTGATGCCAGTAGTAGAGGTCTTAATAATAGG 226 36 100.0 35 .................................... AAGAGATGCTCTTAATATCTCCATAATATTTTGAA 155 36 100.0 39 .................................... TTCCAAGCTTCGCTCTCCTACCATAAAAGCATCTTTTTG 80 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 13 36 100.0 39 GTCGCAATTCACTTTTCCCCGCAAGGGGATTGAAAC # Left flank : CTCAACTTTTGTACAAGCCTTATCGAATTCGTTAGCTGTCAAAACTTATACTCCTAGACACGAGGGGGCCCAGAAACCGGGTTTTTCACGAAAATACTGCGCTGTCGCCTTCAAATTACCGAAAAAACCCGGTTTCTTTAGTCTCGCGGAGTGACCAGAAACCGGGTTTTTCACGAAAATACTGCGCTGTCGCCCTCAAATTACCGAAAAAACCTGGTTTCTTTGGTCTCGCGGAGTGGTCAGAATTAACTTTTTGCGAAGCGGAAATTAATCATGTACTTGTACGTTGTTGTCTATGATATTCCTTGCGACAAGCGCCGCCAGAAAGTTTTTAACTTGCTTTCTGGTTACGGCACTTGGGTGCAATATTCGGTCTTTGAGTGTGCCTTATCTCAGCGTCAGTTTGAGGAGTTCCGCACTCGCCTGCGGGGACGGGTTAATTTGGATGAAGATAACATCCGTTTTTATACTTTGTCAACGCGGGCGATCGGGCAGGTAGA # Right flank : CTCCGTTGATCGTGGCCCCCGTTATTTGTAGATCTCCGGTCGCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATTCACTTTTCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 2056-1362 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000076.1 Microcoleus sp. LEGE 07076 NODE_145_length_27358_cov_4.94154, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 2055 36 100.0 36 .................................... CTCATTGGAAGCACTAACTAACTTCTCGTCTTTTTT 1983 36 100.0 32 .................................... GTGTAGTTCACCTTTTTTGTTGAAACTGTCTA 1915 36 100.0 37 .................................... TAAAATTACCCAAGCATTCACCCAAGCCATTTGTTTT 1842 36 100.0 40 .................................... CTCCTCCTTCATTTTCTGGAGTTGGCGTTGGTGTGGGAGT 1766 36 100.0 37 .................................... CCAGGGGCGTCGCGCCCAGGCACGCTATCCTCTTCTT 1693 36 100.0 37 .................................... ATTTTGGGGTGGAGTGTATCCATCGTCCCTTTGTTGT 1620 36 100.0 34 .................................... ATTGTCAGCTCACCTGTTTGCCAATTGACCTTTC 1550 36 100.0 41 .................................... CTTTCCCCACTGTACCTTGTCGCGACCGCTGTCTCGTGGTA 1473 36 100.0 40 .................................... ATCTAACCGGCATTTTCCTTCTTCATCAACTCGCCCACCC 1397 36 97.2 0 .........................A.......... | ========== ====== ====== ====== ==================================== ========================================= ================== 10 36 99.7 37 CTTTCCGAAACCACTTCCCCGCAAGGGGACGGAAAC # Left flank : ATCATCCTCGTGCCCGATCGGCTCTGAAGTGTCAAATATTTTTACCAGCTATTAGCAAGCAAAAGTTTTTACTCCGAATCTTGAAAACAAAATAATTTTTTGGTTGAAGCGCGGTTTGTTTGTCGCTGGGGCGGCACTACTAATCGATGCACTTCGGGCGATCGGTCAAACCCTGATTTTTTGGTTGAGGTGCGTCGATGGAAGTTTCTACAGTTTTGGCGCAGCAGCAAGCGAATGCTTCTACGCAAAGCCTTGAAGAAAGGGTTGATTTGTGCTGAGAGTGCGGTTTTTTGGTTTGTCTCAAATGCAATCGACGCACCTCGGGCGATCGGTCAAACCCCGATTTTTTGGTTGAGGTGCGTCGATGCCTCTCGGTGTCAGGATTTCAGCAGTTTGGGGACGGTGCTTGTTGCAAGTTACCCCCCATTTATTGCAAGTAAAAAAAGGTGCGTCGATTTGACGGCTGAAACGCTTGCTGGGCAAGGGGTTGTAGCAGAACT # Right flank : AGGAGAAGTAGGGGGCGAGAAGCCGTGTCAGGTGCGGATACACCCGTGAAGGAGCAAGTTTTATCCGAGATATGGCAGATCCGCACCCGGAGGATTAACATCACACAATTCCCGCTGCTACTGCACTTCATCAACCTGGAACCTGCTCTATTTTCCTCAAAAAATCCCGGTTTCTGAGCAAGTGCCGCTAACTCCAAATCTAAAATCTCAAATGGATTCGCCTCTGTGGATATAGAATTCTAGAATATACCGTCAAAATCCGCCGGCAGCCGTAGCGTCAACTTGGTGGTTTCAGGAAACCGTGGACTTAAAACAAATATTCAAAACGCCGAATCCCATAATCGGTGTCGTACATTTACAGCCTTTGCCAACTTCCCCCCGCTGGGGGGGGAACCTCAAAGCTATTATCGGAAGAGCCGAACAAGAGGCTACAGCGCTTGCTTCGGGCGGCGCACACGGTATCATTGTCGAGAACTTTTTCGACGCTCCTTTTGCTAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCGAAACCACTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 26314-22928 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000085.1 Microcoleus sp. LEGE 07076 NODE_159_length_26339_cov_5.08588, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================================== ================== 26313 36 100.0 38 .................................... GTAATTACTTGAGGTGCGACAGCGATCGTTACTTCCTC 26239 36 100.0 41 .................................... AGTACGCATATCCTCTTGATGGTTTTACTCGGATAATGTGA 26162 36 100.0 45 .................................... AGTAACTCTCTTTATGATTTTCTCAAAGTAGGATTTGACCATGTA 26081 36 100.0 45 .................................... TACGGATCGCCCATTGGTAATTCAGAATCAAAAGTGATTCCGATA 26000 36 100.0 51 .................................... ACGACACAAACTTCGACAACAGAGATTCGACATCTACCAGGAACCGACTAC 25913 36 100.0 33 .................................... TATCCCCCACTCGATTAACTACTAAATGAGTAG 25844 36 100.0 44 .................................... TCTGCCGGATTTTTGTTAGTAGCTGCTATCAAAAGCTTAGTTTT 25764 36 100.0 33 .................................... GCAAAGCTAGTACATAGAAATCAAAAATATGGA 25695 36 100.0 39 .................................... AAGCTGTCCAACTCCCTCTTTATTTTGAGCATTACGTCT 25620 36 100.0 35 .................................... AGTATTCCTCTACTGCAATTCTTTTACAGATACTA 25549 36 100.0 40 .................................... AAGCTTTAACCCAGGTAGAAAATTCTTGTTCCCAGCCACT 25473 36 100.0 41 .................................... TTCAATTGAGTGTTACTACTATCTAATAATTTTCTACTTTT 25396 36 100.0 39 .................................... GTTAGCCGGATCGATGATGGTAATAAGTTGTTTGGCTAC 25321 36 100.0 36 .................................... GTCTGATACTCAAAGTTGCATTTTGCAGTTACTTTT 25249 36 100.0 42 .................................... TTTGCTTTCCGTGTTGCGGTAAATGGCTTTTGTTTGCATAAA 25171 36 100.0 37 .................................... CAAAATACCCATGCACACATTAGCGTACAATCCGCTT 25098 36 100.0 40 .................................... GGATGAATTCGCACTTCAGGCTCGGATCGAAACGGCTAAC 25022 36 100.0 45 .................................... CTTGATTTCAAACAATTCCGGTGTTGCTCCGGCTTTAGCCATCCT 24941 36 100.0 42 .................................... GCTGTGGTTCTGACCATCCGATGTTACCTACTTCCTTGTCCC 24863 36 100.0 46 .................................... TCATAGACTTTGGTACCCTATCGGATAGGTTTGCAGCACGTGATAG 24781 36 97.2 43 ...............................A.... ATTCCCAGTCCTTTTTCGACTAGCAGTGTAGCGAATTTGTATT 24702 36 100.0 36 .................................... AATTAAGTATTTCGTATTTTCGTCAAAACCTGACCG 24630 36 100.0 38 .................................... ACGGCAGCTCTTGCGTTACTATCTATGAGCTTGTACAA 24556 36 100.0 42 .................................... GTTGTCGGCCGACAAGTTTTTATCATTTCATGGAAACCTTGA 24478 36 100.0 33 .................................... TTTGCTGGTGTAAGCGCAGTGGCGATTTTTTTC 24409 36 100.0 35 .................................... ACTAGCCATCTCCCTAAAAGTTTCATTAAATTTTT 24338 36 100.0 53 .................................... ACAGCACTGACGATCGTCGGAACCAAACAACGAACCGCTGCCGCCGACACAGC 24249 36 100.0 45 .................................... ACTTGGAGGCGAATCATTTTCCTTCCTGTCAGAGGCTGCCACTAA 24168 36 100.0 45 .................................... CAGATTCTGAATTGCAAGATTTACTAGAAATATTTACTTTGTAGT 24087 36 100.0 29 .................................... TTTAGAGGGGATTATGTAGTTTTTGCTTA Deletion [24023] 24022 36 100.0 34 .................................... CATATCAAGCTGCTTCTGCTGGTTTTACTGAGTT 23952 36 100.0 42 .................................... TTGGTACATAGTCCCATTTGACTTCGATTACGGCATTTTTCA 23874 36 100.0 38 .................................... CGCGTAGTTTGCCCCAAATAGTAGGTTTTGCGCCAAAA 23800 36 100.0 39 .................................... ACCCCAACAAATGTAACTTCACGGCCGCCAATATTGACA 23725 36 100.0 41 .................................... TTGGTGGGGCCGGCCTTGATGTTTAGGTCAGCACGTTGAGA 23648 36 100.0 34 .................................... CTTAGTTGTGGGCTAATGCTGTCTGGTAAGTTAG 23578 36 100.0 43 .................................... TAAGTACGTGAGAACTTCACGACACAGAATGCTAGTGATACGG 23499 36 100.0 50 .................................... GTCGCTGTGGGCGGTGCAGCGTATCCACTCTGAAAGGCAAGTGTTTTTTT 23413 36 100.0 36 .................................... CTGGGGGCGGGCCTTCCCATCGCCAGCGCCTCCGGC 23341 36 100.0 42 .................................... GAATGGTCAATGTACCGTTGTCAGATATTGTTGTGTTCATGA 23263 36 100.0 35 .................................... AATAAAGTCACGAAGACTTTCTTTGCGACGCTGAG 23192 36 100.0 41 .................................... CTTGGTTGAAGTCAAACCTCAATTTATGTATTTGTTAGCGA 23115 36 100.0 34 .................................... CTTGGTTGCTGAATTCCTGTAAACGGCTTTAGTT 23045 36 100.0 46 .................................... TCGCAATCGTTTCGGAATTGGGAGAAGTGCCAGCCATGTTTTCCGA 22963 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ===================================================== ================== 45 36 99.9 40 CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Left flank : ATTTAGATGTTAGCTCTTATTCTCA # Right flank : GCTAAAACAAAATTAGTGGAAGTCTTCTATTAATGCGACAGTTTAAGGGCAACCATAAATAGCTGTTGACAAAAGACTAGATTTGTAATAGTCTAAATTTGGGGGGATGCCTTTTAGGGGACGCCTCTACCGCATAGAGTAAACGTCTTTAAGGCATCGTCCTATCCCCCAGCCGAAGGGTTACGGCACTGTCTAGCAAGTTAACTTGTCACTTGCTAGAAATACGTAGCTAAGACAAAGTGTGTCGAAGTCTTCTATTAATGCGGAATCGAAGGAGGCTTCGACTTCACACCACATCGCAAACAAAACTTAAAAAATCAGAGTTTTCTGTAGTGCCAAAAGCTCTAATTTTTTAAGCTCTGGAAAACTTCAAAGACAAACTTTTACAATTCAAATTTATGCAATTAATCCGAATTGCGAAGAATTAACAAGCACAAAAAAAGCCCCGTGATTGGGGCAAAATTTAACTATTTTCAGTCGTTGGGTGGAGACGGATTTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 5451-6531 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWV010000004.1 Microcoleus sp. LEGE 07076 NODE_14_length_71777_cov_4.86141, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 5451 36 100.0 40 .................................... ACTCTAAATTAGAATCCTGCATTACAAACAAAAATGTTGA 5527 36 100.0 40 .................................... CAGGTGGTGCGCCAGGGGCGTCGCGCCCAGGCACGCTATC 5603 36 100.0 37 .................................... AACAGTATTGCGGTATGGTTCGTCATTCCCGTATTTT 5676 36 100.0 35 .................................... AAGAAGGTCCTGACTGTTGGCCAGGATAGGGAACA 5747 36 100.0 41 .................................... TTCTCTTTTTGAAACTAGGGAGTGACAGGAGCATCGAATAG 5824 36 100.0 38 .................................... TCAAGGGAGGTAGTAGTTTTAAAAGCGAGAAACTCAAG 5898 36 100.0 35 .................................... AATTTGGGGGTTCATAGCCTTCCTCGTCAATAAAA 5969 36 100.0 38 .................................... TTTGGGTTTCTTCTTGCGTTTGACTCATTTTTTCACTC 6043 36 100.0 39 .................................... CGGTAGAGGTCTGCGGTTTCCTCCAGAGACATAGGTTCA 6118 36 100.0 38 .................................... ACTTGAGTTGTCAGAACTTGAGTTGTCAGAACTTGACT 6192 36 100.0 39 .................................... ACCTACTGCTTCAAGGAATGCGGAAAAAACTGTTAGACC 6267 36 100.0 40 .................................... ACTAGAGAGGAATCCATATTTAGAATGGTGGGTGTGCCGT 6343 36 100.0 41 .................................... TTGCGGAATCCCGATGGGTAACACACAATTGTGTCTGACCC 6420 36 100.0 40 .................................... CCCACTCCTGTAGCAAACGTTCCAACTTGGTCGTTAGCTG 6496 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 15 36 100.0 39 GTCTCCTTTACCACTTCCCCGAGAGGGGATTGAAAC # Left flank : TGATTCACGTCAATTGGCCGGCACAGGTTGAAATTTATCATCCTTATTTGCGGGGAGCTCAAAATTTGCGGCCGGATTGGAATTTGGCGGTGGCTGCGGCTGGGGAAAAGTAGATTTGGCGATGGTGAAAGTCGATCGCCCGGACAATTCATAAAGGGCGATCGGCAGATTTCTTTCTCAAGGGGTTGACAAGTTGCAAGTTAAGGTGTATGTTGGTGAGTGTGCGAGTTGCAAAAACCGCTCCAGAATTTTGAAAATTGCATAGTTTTTTTTGGGATCTGCAGCTAGTTTCAGTGTCGCAGAATGTCAATCGACGCACCTCGGGCGATCGGTCAAACCCTGATTTTCTCGTTGAGGTGCGTCGATGACTCTCATAGCAAGGGTTACGGCTTGCCAGCAACTGAGCTTATTGCTGATTTTACCCTCTTATTGACAACAAAAAAAAGGTGCGTCGATTTGAGGCTTGAAACCCTTTCTGGGTAAGGCTTCCTGGACGAACA # Right flank : CTTTAATGATTGCCTTTTCGGCATCTGATAGCCAAGACACCAGGCGGTTGAAACCGCTGCTACACAGTCAAAGTCCGCCTGCGCGGACTAAAGATTAACTGGATTTGGTATTATTTCAAAGTCCGCGCAGGCGGACATCGTTTGTGTAGACGCGGTTTCAACCACCTCCTTCATAAACTGGATTTGGTATTATTTCAAAGTCCGCGCAGGCGGACATCGTTTGTGTAGACGCGGTTTCAACCACCTCCTTCATAAACTGGATTTGGTATTATTTCAAAGTCCGCGCAGGCGGACATCGTTTGTGTAGACGCGGTTTCAACCACCTCCTTCATAAACTGGATTTGGTATTATTTCAAAGTCCGCGCAGGCGGACATCGTTTGTGTAGACGCGGTTTCAACCGCCTCCTTGATAAACTGACGCAGGGTGTCAGAAACCGGGTTTTTTCGAGAATACCCTTACAGCCGACAAAAATCCGAAAAACCCGGTTTCTTTGATTTTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCTTTACCACTTCCCCGAGAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //