Array 1 341920-345908 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGPR01000001.1 Macrococcus caseolyticus strain NCTC963, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 341920 36 100.0 30 .................................... AATTTTTTGAACATGGACTTGCGTGATCTC 341986 36 100.0 30 .................................... TTTCCCGAACGGAACTCAGTTGCATAGGGT 342052 36 100.0 30 .................................... AATGACATCACTTTCTAACTCGTCTAAGCT 342118 36 100.0 31 .................................... ACCATCATTCATTCCAAATACACAAAGATAT 342185 36 100.0 30 .................................... TCTAGTGCTTACATTTCCAAATTTAGTCAT 342251 36 100.0 30 .................................... AACATCGACATAACCATGTTGAACAGCTGC 342317 36 100.0 29 .................................... ATAATCTTTAATCATTCTTACAATTTGGT 342382 36 100.0 30 .................................... GGTCGAAAGATAATAAAGGAATGCTACAGC 342448 36 100.0 30 .................................... GCCACCATCAATAATAGACCTACCTCCGAC 342514 36 100.0 30 .................................... GGTAAAAGGTGGAACTCCGTCTTCTGTATA 342580 36 100.0 30 .................................... AAGGAGAATAACATATGAATAAAACAAATT 342646 36 100.0 30 .................................... TCTTCTGCTATTCTTCTCAGGAACCTTTCA 342712 36 100.0 30 .................................... AGCATCAACCACGCCGCAATTGTGCAAGAG 342778 36 100.0 30 .................................... TCAAGCAGTAGACCAAGATACTCAAACACT 342844 36 100.0 30 .................................... TTAAAAGTTCGTCAGGAGTTTTATAATTTT 342910 36 100.0 30 .................................... GCACAAAATAAAACATTAGTTTTCACATCA 342976 36 100.0 30 .................................... TTCCTGGAACATCAGTTCAAGTGCTTCCAT 343042 36 100.0 30 .................................... AGTTGCATCTTCACAACCCCTTACTTATTG 343108 36 100.0 30 .................................... ACCAATGAGAGAAGTATTGAGCTAAACAAT 343174 36 100.0 30 .................................... TTTAATATGTTCAAACATTTCTTTTACATT 343240 36 100.0 30 .................................... TCGATCATGTTGGATTCACTCGTTTAGATT 343306 36 100.0 29 .................................... TTTAATAGAACTTTATCGTAATAAAGGTA 343371 36 100.0 30 .................................... AGTATCTCCAAAAGATATTCAGGAGCGATT 343437 36 100.0 29 .................................... TTCATGTGTACGCTAGTACCATATTCGAT 343502 36 100.0 31 .................................... TCAAAGGGGAGTTATCCCCCTTGGAATTTTA 343569 36 100.0 30 .................................... AGGCAAATTTACCTGGTGATAGGAGAAATC 343635 36 100.0 29 .................................... TCTAATAAAACAGGTAGACTTTTGTGACT 343700 36 100.0 30 .................................... ATGGCTGAAAGCTAGACAGTCAGGTATCGG 343766 36 100.0 30 .................................... TCTCGTATATAAGCTTGCGCATAAATTAGG 343832 36 100.0 30 .................................... TAAAGCTGTAACAGGTAAAGTCGTTGATGG 343898 36 100.0 30 .................................... TGATGGTGACATTATCAATCTTAGGTGAGA 343964 36 100.0 30 .................................... TCCTAAATCTTTAACATTGATATACGCTTT 344030 36 100.0 30 .................................... TAATCCAGAAGTCATATTTGATTACGGTGG 344096 36 100.0 30 .................................... GCTAGAGGGAAGAACCTATATCGTGCGCAA 344162 36 100.0 30 .................................... AGCAGTTTGCTAAAATCAAGTCTGCAAGTA 344228 36 100.0 30 .................................... ATTAAGGAGTGAGTACATGATACCTAATAT 344294 36 100.0 30 .................................... TACAGATTGGTCTATTGGTTTAGCTCCACT 344360 36 100.0 30 .................................... ATGTTATGACTGATTTAATCGTGTTCATAA 344426 36 100.0 30 .................................... CGTTACTCCTGATGGCGATACTCTCATTTC 344492 36 100.0 30 .................................... CTGCTTCACGTCTCCTTTGTGTTTCTGCTT 344558 36 100.0 29 .................................... GATAAATCCACTCATAACATAACTACCGG 344623 36 100.0 29 .................................... ATTGCAGTCAAGAAGACATTGAGAATGTA 344688 36 100.0 30 .................................... TAGTGTATAAACGATTCAGAGTTGCTTGTA 344754 36 100.0 31 .................................... GGTTTTTTCAAAGACAAAGTAGCTCACTCTT 344821 36 100.0 30 .................................... GTGATTTACAATACACCAACAGATAACGCT 344887 36 100.0 30 .................................... ACAGGAAGTAGCAGGTGTACCTGTCTACAT 344953 36 100.0 29 .................................... AGGTAAAGACGGAACAATTTATCACGATA 345018 36 100.0 30 .................................... ATCATGGTCATCTAACTAGATATGAAGAAG 345084 36 100.0 29 .................................... AATGGAAATAGTTCGTATACATTGATATG 345149 36 100.0 30 .................................... TTGCACAGACAAACACCACCGTTTCTTTTA 345215 36 100.0 30 .................................... CAATATACTCACGTAAAATGCCGATATAAT 345281 36 100.0 29 .................................... CACCATGAACCTTAAACACCCAACTGTTC 345346 36 100.0 29 .................................... CACCATGAACCTTAAACACCCAACTGTTC 345411 36 100.0 30 .................................... CAAGCACCCAGCAATATCATTACTATTAAT 345477 36 100.0 29 .................................... AGAAGATATCGCAATCGGTAACTTAATCA 345542 36 100.0 30 .................................... GGATATTACACGTACAAAGTACACAGAAGA 345608 36 100.0 31 .................................... TATGGGGTGCTTGTGTGGTCTATAGGTCTAA 345675 36 100.0 30 .................................... CATACCATGTGCATTGTCCCCATGGATATG 345741 36 100.0 30 .................................... ATCGTGATAACAAGATGATGTTCGACTACT 345807 36 97.2 30 ................T................... GTACGATGTGAAAGACCCGTCATTCAAGAA 345873 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 61 36 100.0 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTTTAAAATAGATGTTCATAATGATTTTAGTCATTTAAGTGCAATACAGACGAGGAAAGCATGTATTGATTTGATGAAGGAGGAGAAAAAAGAAAATATTCTTTTTCTGTTGTTTCCTGAAGCAAATCTAGGTATAAGGGACGTTAAATCCTTTATGGATTTAATTAAGAATTATGGAATGACAACGATTATGGTTACAAATCATCCTTATTTTATGGTAGAAGCCGATTCTTTGGCTATGAGCAAGCATAATATGACTTTGTTTGATATTAATCAGGTTAGAGACGAATTTCGATTAATGTTCCCAAACGAAGAGATAGATGAGAGCATTGTGAGACAAATAGCTATTAATGAATTTTCTCGACAATACTTTATTAAAGATGAGCGCTATATCAGATTTATAAATGAGTACTAGTCGTGTATAATAAATAATAACTATAAAAAATGTTTCATTATCACCATAAAGAGTAGTTTATGCCGCATAACTTCGTGTTTTGAG # Right flank : CATGTGTTCTTCTATAATCTTTATAATTAGAATACACTCATATTCCTCACACCTATTATTGGGATAGTTGGCACATTCTTCGGTTTCATGATAGAAAAGGATAGCTAAGAGCATTTATTCTTTTATTAAATATTCTTGTTGCTTCCAGTATCGGATTAGTGATATTTTTTGGTACATTGATATTTGGTCCATAGCAGAAAGGTGGAGCTCCATGAATTTGCGTTCAGGTTTATTAATTTTCTTTTTTATGATGTTCGTTCTATCAACTATTTATAACATTTATACAGAGATAATGAGTGACAATATCGCTGATTCATTAGGTGGCTTCTATAGCTTATCAGTGCCGATGCTGGCTTTAGCATTTTATCCTGATTTAATAGATAAATCCTCTCGAAGTATCTCAGTGTTTGTATATAGATTATTGATATTTGTTTACGCTGTTGTATTATTTAGTTTTATGATTAAATACCATGCATCTTGGTTCTTATTATTCTTTGAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //