Array 1 2780245-2776073 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEPWG010000001.1 Acinetobacter baumannii strain CriePir168 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2780244 30 100.0 29 .............................. TAAAACAACGTTTTTTGCCCCGTCATAAA 2780184 30 96.7 30 ............................A. GGAAACTAAAGCAACTAACCAAGTTGAAAA 2780124 30 100.0 30 .............................. GAATTGGCTAAACCTGCATTGATTGCATGT 2780064 30 93.3 30 ............................AA GATGAATACTTTCAAAACCGTAAACGTTAT 2780004 30 96.7 30 .............................G CTACAAACTTTATAGCAAAATCATCTTCTA 2779944 30 93.3 30 ............................AA ATAAAAAGAAATTGAATACAACCACCATTA 2779884 30 96.7 30 .............................A TAACATCATTTTCAGTATCACAAACGATTA 2779824 30 100.0 30 .............................. TACCATATCGTGTTGCGCCAATAACTTGCA 2779764 30 96.7 30 ............................G. ATGAGTCACTTCCATCTGACTATACAGATA 2779704 30 96.7 30 ............................G. ATGATGCCGTAGCTTCTCAAATCATGTCTG 2779644 30 96.7 30 .............................A AGGCATATGGCAAATTTGAAGAAGTTAAAA 2779584 30 93.3 30 ............................AC TGAGATGTTCAAAAGATCAAAATCCTCTTT 2779524 30 96.7 30 ............................G. ACGCACCGCACCCAGCTTTTTTCATAACTG 2779464 30 93.3 30 ............................GC TTTTTTTTACTTCTTCTTCAACTTGTTTAA 2779404 30 93.3 30 ............................AA GCACGAGACCAATCAAGCATCTTTGTTAAT 2779344 30 100.0 30 .............................. TGAAAAGCCACATTCGCAAAGTTCAGATAA 2779284 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 2779224 30 96.7 30 .............................G GTAAAGTCCTAGTTCATACCTGGTAGTAAC 2779164 30 93.3 30 ............................CG AAAGCACCACCACAAGAAAATGAAGAAAAA 2779104 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 2779044 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 2778984 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 2778924 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 2778864 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 2778804 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 2778744 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 2778684 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 2778624 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 2778564 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 2778504 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 2778444 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 2778384 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 2778324 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 2778264 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 2778204 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 2778144 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 2778084 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 2778024 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 2777964 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 2777904 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 2777844 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 2777784 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 2777724 30 100.0 29 .............................. TTTTCTGTTAACTCTAAAATACCCTTCCG 2777664 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 2777604 30 100.0 29 .............................. GTCTGATCCGACAATTTGGCTGAGTACGT 2777544 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 2777484 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 2777424 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 2777364 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 2777304 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 2777244 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 2777184 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 2777124 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 2777063 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 2777003 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 2776943 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 2776883 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 2776823 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 2776763 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 2776703 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 2776643 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 2776582 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 2776522 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 2776462 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 2776402 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 2776342 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 2776282 30 90.0 29 .......A.....C...T............ GGCGTACGGATAACGGAAGAAAGCATAAG 2776222 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 2776162 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 2776102 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 70 30 96.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //