Array 1 58652-58486 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDZE01000023.1 Sulfobacillus thermosulfidooxidans strain ZBY contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 58651 30 100.0 41 .............................. GTCACCGCGAGTGAGTTTCACATAGGCCCAGAGACGTGTCG 58580 30 90.0 35 G..C....................C..... CAGAATTTGCTCCGAAAATATATTGCCGTTACAGG 58515 30 96.7 0 ....A......................... | ========== ====== ====== ====== ============================== ========================================= ================== 3 30 95.6 38 ATTTGTAGCCTACCTATGAGGAATTGAAAC # Left flank : AATTACCTCGACGTCACCAGCAAGAATCTTTGGATTGTTTCCCAAAAAAGGCACTATCGCTGTAGGATCCGATGCAGATCTTGTCATATTCGATCCCGAAGGCACTATGCTCTGGAGTGCGAAAACCCATCATATGCGTGTCGATTACAATCCCTATGAGGGACGCGTAACCCAAGGAGAGATACGCTATGTGTATTCTCGCGGAGAGAAAATCGTGGATAACGGCCAATTTTTCGGGAAACCAGGTCGCGGTCAATTTCTCGTCCGAAACCATTTTGTAAAACCTTAAGAAATAATGTGAATCACAGATGTTTACTCTTCCACACCCCCATTTGTTGTCGTCGATCCCCAGTAGCGCAAAAAACCCCGGAGATCGACGACAATCCCAAAAATCCCGAAACCCTTATGCAGCAGAGTTTTCGGGATTTCGTCATTCTAAACTTCCAGTACTTTTCATTAAATCTCCGATTGACAATCCTTTCCTAGAGCCGCAAAATGGG # Right flank : CGAGAGTACGAAGTAAAAAGTTGTAGTGCCGCGTGTAAACTTGCGGGCGGCCGGGTCGTGTTTGCGGGCTCAGGCCCTTTAGGATGCCGAGCGGGCCTGGTCGTGGTCAAATGGTCGCCGCCACGGCTTTAAGCCGCGCCGACGTCCTTGGGACGTCTTGGACGAGGGAGAGGAACACCTTATTCGGGCAGGTGTTGGGGCTCTAGTATGGAGCGAGACAAGAGCGTGCGGTTAAGAGTCCGCTTCCTGTCGTCAGCACGTCAGAACGGCATCATGTTGCAAACATGACGATTCAGGCAAAGTCCCTGCAAGGTTTCGTAAGGTCGTTCATCCACAGTAGGCGCTCAAAGAGGTTCCGGGACTGAAAAGAAATCTATGAGAACAAGAAAGTGAGATAGGAGATCTCTATTTGCAGTATAAAGTGAGACCAATGAATGTCCACGATGCCAATGCGATTGCGCAGTGGCATTATCCTAAACCCTACAGCTTTTACGACTTAC # Questionable array : NO Score: 6.95 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 100735-98835 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDZE01000023.1 Sulfobacillus thermosulfidooxidans strain ZBY contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 100734 30 100.0 37 .............................. GCGCTAATTCCTCCTAACCAGGTGTCCAGGAGTTTCT 100667 30 100.0 36 .............................. CCAGGCGTCACATTCGACGCCTGGACAGGAACAGGA 100601 30 100.0 36 .............................. GACTATGGGCAGGTGGCGAGCAGTATAGCCACACGC 100535 30 100.0 37 .............................. GCGCGAAAGACCAAGGAGGCAAAGTACGCTTTTGGTC 100468 30 100.0 35 .............................. TCATAGCTAGGCATTTTTAATTATGCCTATATGTG 100403 30 100.0 36 .............................. CCCAGGAGTAACATCAAAAAAGGCTGCGCAAAAACT 100337 30 100.0 37 .............................. GGAATTCCTAGCCATGCATATAATGGCTATTTCTTTT 100270 30 100.0 36 .............................. AGTGATGCGGCGCATATGGCCGAAGATGCCTGGCAA 100204 30 100.0 35 .............................. TCCGCGCTCAATAACGCGGGCATGAACTTCAATAA 100139 30 100.0 34 .............................. TACTGAACGGCTAGATAATTTTAAATTTATGTGT 100075 30 100.0 38 .............................. GCCGATCCAATGCGTCAGCGTGGCGGTCGTGCGCGCCG 100007 30 100.0 40 .............................. GCGACGTTAACTGTTTGCGCCGTAGGGAAGACTACCTTCA 99937 30 100.0 35 .............................. TTCGATATCGAGTTTAGATCCGGTAGCGAGTAGCC 99872 30 100.0 39 .............................. TCCGTACTCGTGAACGAAACCTTGGCCAATGACCGGGGA 99803 30 100.0 36 .............................. AAGACCATAAGCAACGTATGCCTTATCGTCAAGTAC 99737 30 100.0 36 .............................. ACGCACATACTCCGCACGCTCCAAATACCGTCGACG 99671 30 100.0 37 .............................. ACCAGCACGGAAAACGCCCCCGTATCGAGGAGCATCT 99604 30 100.0 36 .............................. TCACGGATAGCATTGAAGCGGCAGAGGCGTTAGAAC 99538 30 86.7 46 .......................GA.G..T TGAAACTGGGCATGAGGATTCCCCCCGCGAAACGGATGCGACATCA 99462 30 100.0 39 .............................. AACACCACAACCAAGGCCACCAACATACCCGCCCACAGC 99393 30 100.0 44 .............................. AAGCTGACTGGGAAATAACGTATGCCCAATCGGGTAAATTCTTA 99319 30 100.0 35 .............................. GGTATAGTGATATGAGAATGACTCAACTAATTCTT 99254 30 100.0 34 .............................. AAAAATCCACAGTCCCGACACGAACCAGTAGCGT 99190 30 100.0 35 .............................. ATTACATTCGTGAAGAACAGTATTTGCTTTTGTTG 99125 30 100.0 35 .............................. TTCCCCCCAAAAAAAGACGTATATTCCGAACCCGT 99060 30 100.0 36 .............................. TTACTTTTTTGGTTGTGGTCATTTCTATTCTCCTCC 98994 30 100.0 35 .............................. CCAATTCAACGGCAACAGTAGACACAAATATTCAA 98929 30 100.0 35 .............................. CCGACATGTTTGGAATTCAATTCTAAAAAGGAGAG 98864 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================== ================== 29 30 99.5 37 GTTCGTAGCCTACCTATGAGGAATTGAAAC # Left flank : AGAAAAACACTTTTTACGCGATACACGTTATGAACTCTTTGTCGCGCAATGGTAAAGGAGCGCAATAATGTTTGTGATTCTTGTTTACGATGCCGGAGTCAAGCGGGATCCCAAGATTCTCAAAACATGCCGTAAATATTTAAATTGGATTCAGAATTCTGTGTTTGAAGGTGAATTGACCGAGGGGAAACTCAAAAAAATTACACCGTGAACTCGGGGATATTATTAACCCGCGAGAAGACATGTATGTTTGGGAGAGCCAGTGGTATCATTCCCGCATTCGTCTCGGACAGCCGAAAGGTGAAGACGGATTTATTCTCTAGGCACCGGTAAATTTGTCGTCGATCGTCAATAGCGCAAAAACCCCTGGGGATCGACGACAATCCCCAAAATCCCGAAAACGTTATGCAGTCTAGGTTCCAGACTTTTATCATTAATAAATGACAACTATTTCCATATATTATTCGATTGACAAGCCTGTTACAGAGCCGCAAAATGGG # Right flank : AGCGTTGGCGACTTCTAGATGGTGACGTAATGGATTTTAATGAGACTCCATATGATATATGAAATAAGCTAAATGACCTTGTGATGAAACGGGCACAACGTCATTTAGCTTGATTTGCCGATATAAACAATGATTCTTCATATGATATAATCGGAATCCCGATTTGTTAGTTGATAGCCAATGTTGTATGAAAGAAATATGACCCAAACGATGAGGAGAATGCGTACGGCAAGCCACCAAACAATCCGTACGGTAAACATGACTACTCGTAGGAGCCACAGAAACATTCGGATGGATAGTTTCAGTAACCCATACAAAATCGCGGCAGTGATCCAAAATACTTTGCTGTACCATGGCAGTCCCGATAATTCCTCCATGAGAATTTACCTCCTAACTAATTTGTTGTGTGAATCTGGTTGTTCCTTAATTCCCGGGCTCTCTTTTTTTGAGTTAGACACTACTTGGTTGTTGATGTGATTAAGGCCAATAAAAGATCCCGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //