Array 1 34693-39459 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBT010000017.1 Psychrobacter urativorans isolate Psychrobacter urativorans ACAM311, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 34693 28 100.0 32 ............................ ACCCACAAAAAGCTCAACCATTGCAGTAAATA 34753 28 100.0 32 ............................ TCAAAAAAGCAGACCCTAATCAGCAGATAGAT 34813 28 100.0 32 ............................ GTCCGACTTGTCGCTGTAAACAACCTGCATAT 34873 28 100.0 32 ............................ GCATAACTAGCAAGTTCTTGCTCGGTTGCGTA 34933 28 100.0 32 ............................ CACTCCCGACTACACAAACGTAGCAGTCGTCA 34993 28 100.0 32 ............................ ACTAAAAAAAGTATGCCAAGCACTAAAAACAA 35053 28 100.0 32 ............................ AGTATCACCGCCAAGCTTACCAATGCTAATAT 35113 28 100.0 32 ............................ TATCCACCGCAATGGCACTTGATCCGTTTATC 35173 28 100.0 32 ............................ GAGAAAGCTCGCGCTAAAGAAGCGAAAAGAGT 35233 28 100.0 32 ............................ TTTAGCTATTCCGTCTGACGCGGCTTATTTGA 35293 28 100.0 32 ............................ TTCATCTGATTGCGGGTTGAAGAACGCATCAC 35353 28 100.0 32 ............................ AGCGTAACGGCGTGGTTTATAGCGTAACTTTT 35413 28 100.0 32 ............................ AAAAAGACCAAAAGTATTGCTGCTTACTAGGG 35473 28 100.0 32 ............................ ATAAAGCGCTTATTAGCGAGCTATATGATAAA 35533 28 100.0 32 ............................ ATAGACCGTAGCTTCGATTGCTTTGCGGTTGT 35593 28 100.0 32 ............................ CAAATATCAATAATCTTTTGGTCAAACTCAAG 35653 28 100.0 32 ............................ GCTGTATTACCCGTACCCGTACCGCTGTAGTT 35713 28 100.0 32 ............................ ATCACCGTATTAGCTCGCGTACAGCCATTTGG 35773 28 100.0 32 ............................ TCGTTAACCAGTTTATCTAAATAAGTAAATAT 35833 28 100.0 32 ............................ TTGCAATTCTTGCTCCGCTACTACCAAAGTTA 35893 28 100.0 32 ............................ CCTAGTCCCTTTTTGACCGCCGACGGGATTAT 35953 28 100.0 32 ............................ GTCAAAAAATGGCTGAAATTAGCAAGGAAATA 36013 28 100.0 32 ............................ TTGTAAAAAGCATCGGCACTTGCAGCTTTCTC 36073 28 100.0 32 ............................ TAGCAGCGAAAAACAGCAACCGCTCATCTAAT 36133 28 100.0 32 ............................ ATCAACGTAGCCAATCAAATCTTAACTTTCTT 36193 28 100.0 32 ............................ AACCAAAAGCACTGGTGCGGCGCAGTACATTA 36253 28 100.0 32 ............................ CACCAAAGCCATTTTGTTAAGGGTTTTAATAG 36313 28 100.0 32 ............................ AACCAAAAGCACTGGTGCGGCGCAGTACATTA 36373 28 100.0 32 ............................ CTCGATAAGCGGCTGCAAGCAATCACTATAGT 36433 28 100.0 32 ............................ TCCTATTTCAAGTGACGCAGCAGGAGAGTACT 36493 28 100.0 32 ............................ TAATCCCTTCAAAGTTTATTCCGGTCGCTGTC 36553 28 100.0 32 ............................ ACTCTCGTTAACAAACGCAATAACAAATGCCG 36613 28 100.0 32 ............................ GTTGGTAGCGTTAAAAACATCAGCTAACACTT 36673 28 100.0 32 ............................ GACTTGAGCAAATATACTGATTCAGGTTACTG 36733 28 100.0 32 ............................ TAGTTCAAGCGATGTAGCAGGTGATTACCCAC 36793 28 100.0 32 ............................ ATGCTACAAGCTTATGTCGCTGCTGCTGAGTC 36853 28 100.0 32 ............................ GATAGCCCCAGCGAACGCATATAAATCACCTT 36913 28 100.0 32 ............................ AAAAAGCAAGCCTATATAACGAAATTGGCTTA 36973 28 100.0 32 ............................ TAAAAAATAGTACACCCCAAGTTTATACCCAT 37033 28 100.0 32 ............................ TTCAACGCCTAAATAATCACTTACTAAAAATT 37093 28 100.0 32 ............................ TTAACCAACCTGGCGAAGGTACTATTACACTT 37153 28 100.0 32 ............................ ATCAGGTAAGTTCATTGGCGCAACGTGCATGC 37213 28 100.0 32 ............................ AGCGAAGGTCGGCTGCGCGTCTTTCGCCCACA 37273 28 100.0 32 ............................ GTTAATCCATCTGGGGCAACTATAAAAGACGC 37333 28 100.0 32 ............................ TAAATCAAGATGGGGTCACGGACGTGGTGGCA 37393 28 100.0 32 ............................ ATATAAGCAACCATAACCACCACAACAAATGC 37453 28 100.0 32 ............................ TGATAGAAAACTTTATCATTAATAAAAAACCA 37513 28 100.0 32 ............................ TATACCTGATTATGTTTGGACGCAAGCGAAAA 37573 28 100.0 32 ............................ CCTACGTTGCGGGAACGGGCGGGTATTATTTT 37633 28 100.0 32 ............................ TTTGCTCGCTGCAATAATATCTGCAACGTCTT 37693 28 100.0 32 ............................ TGCAAAAATGTATCGAATGCTGGAACTAACTC 37753 28 100.0 32 ............................ ATGAGGGGCGTGGCGGCTGGACTGTTGCTAGA 37813 28 100.0 32 ............................ TCCCAAAATCTACGCGCTAAAAGGATTACAGG 37873 28 100.0 32 ............................ GTCGCTGTTAGCGGTGCGTTGGGTTGGATTGT 37933 28 100.0 32 ............................ TTTTGTATCTGTGTTCCATGACAACTTAAAAA 37993 28 100.0 32 ............................ TTCATCGCATTAGTCAGTGCATCGTTGTCAGC 38053 28 100.0 32 ............................ CGAATAGACAAAAGCCTTAGAAGGTAGATCTA 38113 28 100.0 32 ............................ ACCGGTACGCGCCTTGTTATGGCCGTATCGTA 38173 28 100.0 32 ............................ TTAGAAGGTAGACCCAAAGGCAATGTGTCCTT 38233 28 100.0 32 ............................ TGCTAACGTTGAGCCTACACCGACAACGCAAG 38293 28 100.0 32 ............................ ACGCCATCAGTCACCAACGGCATCATTGGTAT 38353 28 100.0 32 ............................ ATACCACGGAACATAGTGTTGCCTAACGCATC 38413 28 100.0 32 ............................ AGTGCTAGAGGCTGGTAAACGTTCTGAGGTTG 38473 28 100.0 32 ............................ GCCAAAAAACCCTCTCCATTTGCTACATCACC 38533 28 100.0 32 ............................ GATTATAAAGCTAGGGCTGTGCGACTGTATTA 38593 28 100.0 32 ............................ TTGCCAAACAGCCTATCCTTAAAGCCTACGCC 38653 28 100.0 32 ............................ AAACTTTATCGAGATTGTTCGGTACTTACTAA 38713 28 100.0 32 ............................ AATCTCAGTCGCTTGAGCGTTCTCGCTGGCGT 38773 28 100.0 32 ............................ AATATCTTTACTGAGGACGTTGAGGGTTGCGA 38833 28 100.0 32 ............................ ATGAGATAAAGCGCTCAACACGAACGGCGCTC 38893 28 100.0 32 ............................ GTTTCAGCGCCTAATACTTCCTGCGTCGCTGA 38953 28 100.0 32 ............................ TCCACCGCTTGCGCTAGTGTTGGCACGATAGA 39013 28 100.0 32 ............................ GTTCAGCGTTGAGATAAAAGCTTTTAACGAGC 39073 28 100.0 32 ............................ ATGAAGTCAGGATATAAGCAAGGTGTGCTAAT 39133 28 100.0 32 ............................ TGATAAAGAAACGATGCAGGCTCAATTAGTAA 39193 28 100.0 32 ............................ TACGTTGCCAACGCTTTTGATAGACAGGACGC 39253 28 100.0 32 ............................ AAACACTAAAAACAAACTGCCCTTTTCGTAGG 39313 28 100.0 32 ............................ ATGCGGACGAGCACGCTGAGTTGATGAGTAAG 39373 28 100.0 31 ............................ TAGTGTCCTTATTTTAATAGCAACCCATTGC 39432 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 80 28 100.0 32 CTTCATCACCGCATAGGTGACTTAGAAA # Left flank : CATAAGCGACGTTGGCGACAAGGCAAAAGGGAACGTGGTAGTCAATCGCTACCGTCCAAAAAATATGCTCAAGCAAGCTGAAGAGTTTGCCAAGTATAAAGACATCAGCTTAGATGCAGCGCTGGTACACTGTGCCGCATATAAACAGGATAATAAGCTGTATCCGTATATCAGTCTAAAGAGTATCAGTAATAAGCAGCCCTATCCATTATCCATCGTTCAACAGGCGGTGGATGATGCAAGCCAAGGCGCGTTCAATAGCTATGGCATCAATAATGCGGCGGATAAAGTCACTGTGCCGCATTGGTAGGTTAAACTTTTAAACTCACAGCATGTTAATGATGAATTACCCAAAAATTGGGCGTAAAAACCCTTTTTTCTACTATTTAAAAATATGCTTATTTATCAAACAGTTATGGCAAGGCAAAAAAGGGAGGGTAAAATAGGGTATTTTGCTCTCCACGCCTTGCTATAACTGCTTTTTTAGAGTTATAATTCCT # Right flank : ACTATGAACCACCCCGACTATATCGGAGACTGTTTGTTTAAGTTAGGCCGCTAGGCCTAACTGATTAAGATTATCATAATAGCGTCTTTCAAACTCAAAAGGTGACACATAATCAATAGCGCTATGCAGTCGTGTCTTATTAAACCAATCCACCCATTCATGTAGTGGCATAATAAAATTGGACAGCGCATAAGAGGTTATACTAACCCAAAGAAGGAAAATGGTATGACTGGCAAACGCAAACAATATACCCGAGAATTCAAACTCGAAGCCATCAACATGGTAATCGAGCACAACCGTAAAATAACTGAAGTTGCAGCCTCACTAGGTATTGGTCAATCAACACTAGATAAATGGCTGCGTCAGTATCGTGAAGAACAACAAGGGATTTCACCGACTCAAGGCAATGCTTTAACAGACGAACAGCGAGAACTACAAGAGCTTCGCAAACAAGTTAAACGACTGACTATGGAGCGTGACATCCTAAAAAAGGCCTCCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //