Array 1 908254-911030 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOKV010000002.1 Serratia marcescens strain MGH224 scaffold00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 908254 29 100.0 33 ............................. CGCCACGCCCGGCTTGCCGTAGATGCGTATTGC 908316 29 100.0 32 ............................. ATACTATAATCAGCTGGGTCAAGCCCTTTCCC 908377 29 100.0 32 ............................. CCGGCGCGACCGATCAGCTGGTTGGAGATTGG 908438 29 100.0 32 ............................. AGCTTAAACCGGATGCCCGCACTTCACTGCAA 908499 29 100.0 32 ............................. TGGGCATGGAGCAATAACCCGGCGTGGATTTG 908560 29 100.0 32 ............................. TTCATGACCCAAATGCGCGGGCTGGCGAATCT 908621 29 96.6 32 ............................T GGAGACAGACGCAGAGCTACGCCAGCGTCAGG 908682 29 100.0 33 ............................. ACAGCTTACCGGTCACATCAGCGTTTTTGCGGC 908744 29 100.0 32 ............................. TGTCTCGCACCGTTTCCACTATTACCCCAGCA 908805 29 100.0 32 ............................. CTATTACCGGCCAGACATCAACAATAATTTGG 908866 29 100.0 32 ............................. GCGCCGTCCGGGATAATCGGTTCTACGTTGAA 908927 29 100.0 32 ............................. TTGAAGTAACTTATAGTGATGAGGGTGACCAC 908988 29 100.0 32 ............................. TTCAATAGCTCATGGCGCGCGGCCTTGGTCGG 909049 29 100.0 32 ............................. CTCATAGGCGGCGGTTCGTCCGTCGATTTCGA 909110 29 100.0 32 ............................. TGAGTTATACTTTCACTGTGGATAGCGCACCG 909171 29 100.0 32 ............................. CTTGTTCTCCAGTTGGCTTATCTGCATCACGC 909232 29 100.0 32 ............................. CGCGCTGACTCGCCTTACTGCGCTATGGAAAC 909293 29 100.0 32 ............................. ACAGTTATTTGCGTTGGGAGCGCTGCCCCGGC 909354 29 100.0 32 ............................. GCATCCGTCACTGCCTTGCGTTTCTCTGCCGC 909415 29 100.0 32 ............................. AACGCGGGTCACATGTTGCTCGCCCACGAGTT 909476 29 100.0 32 ............................. AGTACGTGTGTATTTTGGACACTGCAACGTAT 909537 29 100.0 32 ............................. GAATACCCATAATATTAACCGCCGGGCTATCG 909598 29 100.0 32 ............................. CGTTTATAGTTTTCCATCGACGCACAGATAAT 909659 29 100.0 32 ............................. CGCCTTGGAACATCGTTTACCGGGTTTCAAGA 909720 29 100.0 32 ............................. ATTGCTCATTGTTTTCGGCCCCCGGCGAAAGG 909781 29 100.0 32 ............................. CGCCTGGCGTTCGGCTGCATCATCTACGAACC 909842 29 100.0 32 ............................. CAGATCGTCGGCCTGCAGGACTATATAAGACA 909903 29 100.0 32 ............................. TCTCGCACATATGATGGCAGCATTCCTAACGT 909964 29 100.0 33 ............................. AACTCCTCGATCGCCGATACCTCTTGTGCTTGC 910026 29 100.0 32 ............................. TCACCGATCGGGCTGTTTGACAGCTTCCAAAT 910087 29 100.0 32 ............................. CTGGCGGCTCGCGTTCTTCAGGAACCCTTCGG 910148 29 100.0 32 ............................. TCGTCGGCGCTGACCGTGCGCTTTTCCTTTTT 910209 29 100.0 32 ............................. TTAACGACGATCTGGCCGGAGTGGTAAACCGA 910270 29 100.0 32 ............................. TGTTCTTCGTGCCGATGGCATACAACGGGCCG 910331 29 100.0 32 ............................. AACTGGCCGCATTTGGGTTAACGCCCGAGGAC 910392 29 100.0 32 ............................. CTGTAGAAGTGGTTTAATAGGCTGCGGCTATG 910453 29 100.0 32 ............................. GATTGGTTCGAGCCATCCCGAACCGTTGAAAA 910514 29 100.0 32 ............................. TAAACCGCGCACGCGGCGCCGCAGATCAGATG 910575 29 100.0 32 ............................. AACAGGCTAACTTCACCGTGCTCAACACAGTA 910636 29 100.0 32 ............................. CATGTTGCATAGATAGTGCTTGACTTTGTTTT 910697 29 100.0 32 ............................. AGCGTCGCAAAGGCGACGGATGTTCTTCAGTG 910758 29 100.0 32 ............................. GGCATGTGGGAGTTTCCGCGTATTAACCAGGG 910819 29 100.0 32 ............................. CGCTCGGTGATTGGGTTCATCTCGATGGTGCC 910880 29 100.0 32 ............................. CCATCCAGGCAGAGACAGTGCTGTATGAGGCC 910941 29 96.6 32 .............T............... TAACCCCAATGCCACTGCGGATCCGCCAAACA 911002 29 86.2 0 ...............A........G..TC | ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TTCAGCCCGGTAGACGTGGCCGGCGAAGACCGCCAATGGGTGGCGCTGGCGCCGCTGGCGGTTGACGAAAGCCTGCGCCGTCAGGGGCTGGCTGAAAAGCTGGTGTACGAAGGCTTGGACTCGCTGAACGAATTCAGCTACGCCGCGGTGGTGGTGCTGGGCGATCCGGCCTATTACGGCCGCTTCGGTTTCAAACCGGCCGCTGCCTATGGCCTGCACTGCCGCTGGCCGGACACGGAAAGCGCATTCCAGGTGTATCCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAACAGGTTTTAGTTTTTAATGTATTGATAATTAAATTCTATTTGGTGAACGGGAAATTCGCCAAGAATGTGTTTTGAAATTTGATTATAAATCAATTGGTTGTGTTTTCTAGAGAGTCGAAATTATTTGGTAGAATTTGAGGTCTTTAAAAATACATTTTAATTCAATAACATACTCTAAGA # Right flank : CCAGAGCTTCACTGCCGCACAGGCAGTTCGAATATGAGGGATAAAACTTTACCGACACCTGTTAACGGGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCCAGCGTCAGCTCCCCTTTGCCGCGCAGCGCCTTGGCACCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGATACCAGTGGGGTAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAGATGACATCAGGCCGCCATAGCTAAGCGCGGCATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCCGTCTTGACGATAAGGGATTATTTTACACCCACGGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //