Array 1 65664-66961 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NRDC01000004.1 Aggregatibacter aphrophilus strain CCUG 11575 NODE_4_length_169831_cov_59.909, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
     65664	    32	 100.0	    34	................................	CTGTAACGGTAGCTACATTTTTAAAATTTGTATT   	
     65730	    32	 100.0	    35	................................	CTCAAGCAAAGAGGAGGATTATTGCTATCTTGATG  	
     65797	    32	 100.0	    34	................................	TTGAAATTAGGGAAATGAGAAAAAGGAATATCTC   	
     65863	    32	 100.0	    34	................................	GAGAAAGTGCGGTTGTAGATTTTAAATCCGATTG   	
     65929	    32	 100.0	    37	................................	ATCGCTTTCATCACGGCCGCGTGGAGGTTGAGCATAG	
     65998	    32	 100.0	    34	................................	GCAGTATCGCTCCGTGCAATGTGGTTACACTGGT   	
     66064	    32	 100.0	    35	................................	TTAGTCCGGCACGGTGGCTATAAGTCTTTTGAGTG  	
     66131	    32	 100.0	    36	................................	CGCGGTAAATGTCATGGTGTTGCCCGATTTTGTGGA 	
     66199	    32	 100.0	    35	................................	TAATGTTGAGCTAAAAGGCAATCCGATCATTTTGA  	
     66266	    32	 100.0	    34	................................	CGACCGCGACAGCTACGATAAAGGCTGGTATGGC   	
     66332	    32	 100.0	    35	................................	TGATATAAGCACAAGACTTGTTAGCATTTTGCCGT  	
     66399	    32	 100.0	    35	................................	AATGGATATTAATTAAACACTTGTTCAAACGGCAG  	
     66466	    32	 100.0	    35	................................	TAGAGGATGATAAAAATGACAGCAAAGCCAATAAA  	
     66533	    32	 100.0	    34	................................	ATGAAACCTTTTGATTTACAAGAGGCCCTGAATG   	
     66599	    32	 100.0	    35	................................	TATATCCGTATATATCCAATTTCGAACGCGTGATG  	
     66666	    32	 100.0	    34	................................	TACTATAAAGGCGCGCAAGATGGCGAAACAACAG   	
     66732	    32	  96.9	    33	...............T................	CTCGATGCCGTGCGTCCAGTTGTGCGCGCCTAT    	
     66797	    32	  93.8	    34	..........C..C..................	GATTTCGACGTAACCAATTCCTAACCGCTTAAAA   	
     66863	    32	  93.8	    35	..........C..C..................	ACCACATCGGTCGGGATTACACAATCCAAGCGGTT  	
     66930	    32	 100.0	     0	................................	|                                    	
==========	======	======	======	================================	=====================================	==================
        20	    32	  99.2	    35	GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC	                                     	       

# Left flank :   TTGATGAGATAAGCTATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGTCGTATCGCAAAACATTGTTTAGATTACGGCGTGCGGGCGCAATATTCGGTATTTGAATGCGATGTCACGCCTGACCAGTGGGTTATGTTGAAAAACAAACTGTTGGAAACCTACGACCCTACATGTGACAGCCTGCGCTTTTATCATTTAGGCAGTAAGTGGCGTAATAAAGTGGAGCATCATGGAGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATAGGATAGCGATCTTTATTTTCTTTAACAATTTAGATGAGTTAATCTATTTGTATAACGGCAATGTGGCCGTTATACTGACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATACGCTGATTTTTCTTGCTTTTTTATGTAGGGA
# Right flank :  CAAGATGTCGAGCAAGTCGTGCTCATTTTGTGCGGTGGCAACCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACAGCTCTTTTTGTTGACCTATGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCGTAAATGGCTTGAATGCCTGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCAGCATCGCCCACCAACTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTGCGTCCGCCAAGAAGATTGATGATTTGTACCACTTGCG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.80,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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