Array 1 918-2422 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFKQJ010000006.1 Bacteroides fragilis strain FBJ31K10 scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 918 47 95.7 30 ..........A...C................................ AAATATTCCTGATTCAAACTTTTTAGTTGC 995 47 100.0 30 ............................................... TGCTTAAAGGCTATTCCATAAGTCAACGTA 1072 47 100.0 30 ............................................... CGTTGTCATTTCATCCAGAAAATAGACGAA 1149 47 100.0 30 ............................................... AGAATAGAAAACATCAGCTTGAGATGCAGC 1226 47 100.0 29 ............................................... AAAGAGGCTAATTATCGGTTACCCGGCAT 1302 47 100.0 30 ............................................... GATGCAGGAATTATTCGCGGTGAATTAATG 1379 47 100.0 30 ............................................... TCCTGCTCCCGGCACTTCCTTTGTGTTAAC 1456 47 100.0 30 ............................................... CAACTTCGTTTCCACATCTTCAGCCCACTC 1533 47 100.0 30 ............................................... GATGAAGATGTAGTTGACCTATATTCGTCT 1610 47 100.0 30 ............................................... CAACGCTGACCTGCAAGGCACCATCAACGG 1687 47 100.0 29 ............................................... GGATTCAGACCGTTTGCCGGATTGTTGTA 1763 47 100.0 30 ............................................... TATCCACGACTCCCAAGATTACGAGGATAA 1840 47 100.0 30 ............................................... AATCGGTTTCGAATAATACAAACGACACAG 1917 47 100.0 30 ............................................... CAACGAGCTTTAACAAGGTCTTGCGACCAG 1994 47 100.0 30 ............................................... TCAGACTCCGTATTAGTCTTACGAGCGTCA 2071 47 100.0 30 ............................................... GCGAGGCCCTCAGACGAGCAACCTCTAAAG 2148 47 100.0 30 ............................................... TTTTACAGTATTTCTTTATGATGTGAACGA 2225 47 100.0 28 ............................................... GCAGCCATCTGCAAAGAGATAGCATTCG 2300 47 100.0 29 ............................................... CAGCTTCAGGAACTATCCAACGATATATC 2376 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Left flank : GGGAAAAGGGAGGACCAAGGAGACACATTATTATAATATATAGAGGGGGAATACTTGGAAAACAAGGAGGGGGGATTCATTGGGGAGGGAGAGGAAGAAGGTTTTTTAGTAGAATTGCGGAGAAAGATTGGGAATTTGGCGTTAACATTGTTAATGCGATTGAAAGGGGAATTTGTTTCAGGAGCGGAAATAACAAGGCTTTTGGATTGAAAAGACTTATTATTTGAAGATAAAGGACTTGATTTAATAGGGTGTTAAATCAAGTGATAGGAAAAGAAGAAACAAAAGGGAGAAATGGATTGAAAATGAAAGTAATAGAGGGACAATGAGTTATTTTTCGGAAAAAGGGATAAGTGGTGGACAGAAAGTGATAGTTGTGATTAGAACAAGTATGATTGTAGAGGATTTTTAAAGGAAAGGTTTAAAGTGGAAACGGAGGAGTACAATTACGAAAGACCATTGGAAATAGCATATGCTATCTGATGAAGACAAAGCGATGC # Right flank : TATATCCCGCATAATAAAATGGTTTTCAATAAGTTAAGAGTAAATCAGAAAAAAGAAAAAGAAGACTATTTCCAGCATAAAATCTCGTATTAATGCGAGATTTTGTTTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTCCCATAAAAAAGTTCTATATCCCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCAGGGAGAAATGATTTAACTCTTTTTATATGTACTACTGCATTCTCGCTACTGGCACAGTGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCTGCATAAGCCTTTTTCTCTTTCTTCGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAGCGATCCATAATCTATCGTTCGGGATAAGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //