Array 1 28004-30857 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUQX01000013.1 Desulfurococcus mucosus DSM 2161 YWQDRAFT_scaffold_12.13_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================== ================== 28004 25 100.0 41 ......................... AGACCCAAAATCCCACCACCGTCAATGGTCCTTCCCTTCCT 28070 25 100.0 41 ......................... ATGCCTAAACCGGTAAACCTGTGTCAAGCCCGCTAAGTCTT 28136 25 100.0 39 ......................... ATTCAATTATGGGCTTGGTTTTGGGTTTGGGCTGGTTCA 28200 25 100.0 39 ......................... TATCATATACGGTATAGGTATTAGTCACAGTTAGATAAG 28264 25 100.0 39 ......................... TCGTCAAGTTTCTCCTTAATGAGACGCAGCAGCTTCTTC 28328 25 100.0 40 ......................... ATACGGCTTCAACGTCATATTTAACGGGGGTAGGGCTGCT 28393 25 100.0 40 ......................... AGCCTAGTTCTACGACAAATTTGACGGCATTGAAGTAGAA 28458 25 100.0 42 ......................... AAAGCTCCTCCTCGTTGAGCCATTCCTGCTCGATTAATTCTT 28525 25 100.0 37 ......................... AGGTAGCCAGTGCTGTAGGGCTGCAGCTTAACGCCTT 28587 25 100.0 40 ......................... CTGGCCCCTTCGGCAGGCTACTCATGGGCATTATCAAGCT 28652 25 100.0 41 ......................... CTGGAGGAAATTCATTAATGTTTTGAAGGCCTCGTAGCTCG 28718 25 100.0 38 ......................... CCTAATTATCCCTTCCTTTTTCAACTGTGAAAGGTACA 28781 25 100.0 38 ......................... GCCCGGTTCGAGCTGACTAATGTAACCATCGCTCCTAG 28844 25 100.0 39 ......................... ATCTAGCGGTGCTGGCGGGCAGATCCCGCGGGGCCGGCG 28908 25 100.0 40 ......................... GGCGGAACACATAGTTAGGTATAACGGGCGTATCGCTTAA 28973 25 100.0 38 ......................... ATTGTGGTAGTAGTCGTATCAGTGGCTGTTTGAGCTAG 29036 25 100.0 38 ......................... ATAGCCTGCCGAAGGGCCCAGAGAATATATCACCCCAC 29099 25 100.0 39 ......................... CTCGTCCGTGCTACCACCATATAGGGTTTTACGGCTTCA 29163 25 100.0 38 ......................... TCGGCCAAGGATTAAATCATCGGTGAGATACCTCTTCA 29226 25 100.0 38 ......................... TAGCCTGTAGAATATGTAGCTTAGGGCCGTGCCTAACA 29289 25 100.0 38 ......................... TGTAGGCTTCAACCGAGACAGCCGGCTCACCATCCTCC 29352 25 100.0 39 ......................... TTATACTGATGATATACCGGGCGTTCCTAGCACTGGTCG 29416 25 100.0 38 ......................... TGCAGGTGTGTCGATACTGGCACCGCTTTTATCATAGG 29479 25 100.0 40 ......................... TTAACTCGATCTCCAGCTCCGAGAACTGCAGCTCGCGCAA 29544 25 100.0 40 ......................... CCGAACCTGAACGAGACCGCGGCTACATACCACTTCCCCG 29609 25 100.0 39 ......................... TCCTTCTTTATCCCCAGCTTCCGCTCCGCCTCCTCTAGT 29673 25 100.0 40 ......................... TGAAGCTGATAATAAAGGCTGCGAAGGGCGATAAGGAGGC 29738 25 100.0 40 ......................... GCGTGAAGGAGGGAGGCAAAGATGCTTGACATGGCCTACG 29803 25 100.0 40 ......................... TTAACTCGATCTCGAGGTCGGTGAACTGGAGCTCGCGCAA 29868 25 100.0 39 ......................... ATTAGCCCTTGTCTTAATTGCTCCTTCAGGTCATCCAGC 29932 25 100.0 37 ......................... ACTGCCTCCGTCGCCAGTGTAGTCACTGCGGCCGATA 29994 25 100.0 40 ......................... CACGCTGCTTGACGCTTACGTAGCGTTGAAGGCCTTCGGC 30059 25 100.0 40 ......................... CTGGTTACGGGTAGTGCGTTGGCGCTGAACACCATTTTAG 30124 25 100.0 39 ......................... AGCGAATACCTTTTCACGGTTTCATCGCTATGGGATTAC 30188 25 100.0 39 ......................... TTGTAATACGCTTGGAGATGAATGCTCTGGAATCCGTAG 30252 25 100.0 40 ......................... CAAACACCTTGCGGTCAACCATTATTACACCTATGCCGAA 30317 25 100.0 41 ......................... AGCATTGACGCTACTACTAGTAGAAAGGGGCTATACATTGA 30383 25 100.0 39 ......................... GCGTAATGAATTACCCTGACCATTTACTACACTCCGCTG 30447 25 100.0 40 ......................... ATATAACGGGGGAATTCGAGTATCTCATCGATGTCCTAAA 30512 25 100.0 39 ......................... AGTATCTCATCGATGTCCTAAATGTGAATGGGAGAACCA 30576 25 100.0 36 ......................... ACCATTGTTACACCGATGCCAAAGGCGTCCACTGGA 30637 25 100.0 40 ......................... TATTCGACCACGAGGTCAATGGGGCCCGCGTTGAGCACCT 30702 25 100.0 41 ......................... ATGTTCACGATAATATGAATAGGCGTTTATCAACTCGTTCA 30768 25 92.0 40 ........A..............G. TAGTTAAATACGCTCTAGCCTAGTTTTTTTAAATAGTTTT 30833 25 96.0 0 ..............G.......... | ========== ====== ====== ====== ========================= ========================================== ================== 45 25 99.7 39 GCCTCAATGTAAAGAGGATTGAAAG # Left flank : ATTCCTAAATGTGCCGCCCGCCCTGGCTGGAATAAGCCTAGCTAACGGAGTACCTGTGTAACTAGTTACCAGTAAGCCGACACCGCTATAAGCCATAGCCTTAAGAAGCTCCGAGGATATGGATGCCCTCCCAGCCACGACAACATCCCTAATCAGCTTCAACGCATACTCCTCCCTAGAACCTCCCACCCTAACAACCACCCTGCCATGCTTCTTCCCGAGAAAAGCACCATACTCGTCAACGAGCAGGTAACCGTTGACCAGGCGGGGCAATCCAACCACTCCTAGGATCTACTTAGAGCACACCGCAATAAAAACCCAATGCCCCCCGCTGGTTTTTGGTCGAAGTGATCGCTTTATACAAACAGGTTGATCACCCGGTTCTAGATCCCTCCCGTTGATACTGGTCGAAGCCGCTCTGCACACTCTTTCCAGTTAAAACCGTAAGATATTTAAGCTGCGACCCGGAAAGCATAATATGTAGAAGAGCTTCGACAAGT # Right flank : GGGTTTCGGAACAGCTGCCTCTAAACAAGATGTTGGATGAGTTGGAAATACGTGAATACGCTGTGGTAAAGGCATAAATACCTGGTTTGTCTTTTTTATGGGTGGGGCATGTGAATATTATGAGGCTGGTGGCTCCTCTATTAGTAGTAGCCATCCTGGTATCGGGGCTGGTGGTCCTAGATTATACTGTACCCGCGGATATTAAGAGGGATGAGCATAGGGGTTTAACTACCAGGTATTATAGGGATTATTTTGAGCCAGCTATAAGAATACGTGTACCGGGCACGTCGTCAAGGGCTATCACCATATCCAGGGTTTACTTCTGGGCTCTTAACGGTAGCCTGATAGATCTCGGTAGGTATAGAAGTGTAGGCGGCGTCATAAAGATACCCAAGGGTAAGATTGTCGAGGTGTATGGGGAAGTAGCTGAATACGTGAAGAGAGAAGGGTTAGACCCTGATAGCGTCGGATTAGGATTAGTAATACTGAACTCTATACAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGTAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 1-2335 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUQX01000014.1 Desulfurococcus mucosus DSM 2161 YWQDRAFT_scaffold_13.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 1 25 100.0 41 ......................... ACTATTCTCGACAGGTCAAGGGTAAACTCCTTTCCACTCAT 67 25 100.0 40 ......................... TCTCCGCCACCGCGCTGAAAGCACCGTCAAAGGCTACAAG 132 25 100.0 38 ......................... ATGACGCCAAGTTAGTTAAATCAGCAGTTGTAATCTCG 195 25 100.0 39 ......................... TAATACCCGAGGAGGCAAGGGAATACAGGGATATGTGTA 259 25 100.0 40 ......................... GCCATTAACCTCTACTGCTGTCAATACCACTTCCTCATAA 324 25 100.0 41 ......................... ATTGTTGAATGGGTCATATACACTTTGCCGTCTAGTAACAC 390 25 100.0 40 ......................... ATGACCCAATCACACTCAACATCATTGAGGCACTCTTCCT 455 25 100.0 38 ......................... ATACTCCTCGTGCTCCTTCTCGTATTTCTTGTGCTCCT 518 25 100.0 39 ......................... CTTATTGTCCTTCAGCCACCTATACACTATTTCAACGCC 582 25 100.0 39 ......................... TTTGGCTGGCGGTTCTGATACTCAGTCCATGATAAATCC 646 25 100.0 38 ......................... ACATCACCACTAGTGGGGTATGTTGTGCTTCCCATTTT 709 25 100.0 38 ......................... ACTCCCTGAGGGAGTCCCAGTTTATCCCCGGGGTTTCA 772 25 100.0 39 ......................... AGCGAATACCCGGTGATCACGCCGGCGAACATGCTTGCA 836 25 100.0 39 ......................... TAGAGGTGGTTGGGTATGAGCTACATGGTTGAAGTATGG 900 25 100.0 40 ......................... CTGGGATTGATGTTGAAGTTGAGGCTTGCGAGGAGGCTGG 965 25 100.0 39 ......................... TCAGAGCCCTCGGGGGCAAAGCCCTCGGGGGCTCGACCT 1029 25 100.0 39 ......................... CTCCATTCCCTTATACACTCCCACTCGATGTCATCATAG 1093 25 100.0 38 ......................... ATTAGATCATATAATATTAGGTAAACCTAGCGTTTTAA 1156 25 100.0 40 ......................... TCATCACCTTGGTGAGTAATCTGAGTAACATCCCCGATGT 1221 25 100.0 38 ......................... CCTCACTCCCCTTCACCTCCCAGCGCGAGATACGCTAG 1284 25 100.0 39 ......................... ACTCATCTTCCGTGGGAGGCGAGCCCCTAATGCCATAGG 1348 25 100.0 36 ......................... CGCATGCCGTTAATGTAGTCATCCTCAAGGGCCCGG 1409 25 100.0 41 ......................... AGCAAGTAAATAACGACGCTGCGGTGATAACCAATGCCAAC 1475 25 100.0 40 ......................... GGGTCGGCCAGTATAATGTACTCCACGTCCCGCGGCATAG 1540 25 100.0 39 ......................... GGGAGCTCCGTGCGGAGCGAGTACTTCACAGCGTACTCC 1604 25 100.0 39 ......................... TTAACGTCAAGTGCATATACATAATTATCGTCATTTTCA 1668 25 100.0 38 ......................... GTAAACACCACTTTCCTGGATCTGCTGAAGAACGGCAC 1731 25 100.0 39 ......................... CATTTACGCTTACAATGCTATCCCTGAAGGTTACATTAA 1795 25 100.0 39 ......................... TATTCGCTATGGCTGGAGGCATAGGTCTAGGTCTATTCC 1859 25 100.0 40 ......................... GATTAGTGTAGTTGCCCATGAGGTCAGCACCGGGGATTGC 1924 25 100.0 39 ......................... TATAATCCGCCAACCGATATGGAACGGGCTCCAGATACA 1988 25 100.0 41 ......................... ACCTGAGATGTTAACGGGACGAGGCTTATAACCACGGCTAA 2054 25 100.0 40 ......................... TTGCACCTCTGTAGGGTTTCCCGTGCCTCGGCGAGGATTG 2119 25 100.0 39 ......................... TAGAGAGGTTTATGGTCTCAATTAGTCAAAAAGTCGAGA 2183 25 100.0 40 ......................... GCATATATCTCAGAGAAGAAGCCCAAGTCCGATACACTTG 2248 25 100.0 38 ......................... CCCTTCTTCTCCACTAGTATTAGGTAGCCGTGCTTGTA 2311 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ========================================= ================== 37 25 100.0 39 ACCTCAATGTAAAGAGGATTGAAAG # Left flank : | # Right flank : GCTTGTAGGAATGTTGCTTGATGCGGGCCCGCCGGGATTTGAACCCGGGGCATCCGGCTCCGAAGGCCGGCGCCCTTTCCTGGCTGGGCGACGGGCCCTGTTTCATGGTCTTGTTATTTCTTCTTGGATGCTATATATCCTTGTCTAGCTGTGTTCTTTGAGTATTTGTCTGCTAGGTGTAGTGGTAGTGGTAGTTTGAGCCCTGGTTTCATGAGGTGTTTGACTACTGTGACGGCGTCTTCGAGCCTGATTAGGTAGCCTATGCTGACGTATAGCTTGACTCCTTTCACTGGTTCCAGTATTTCGCCGGCTGTTACTCCGTGTGCTGTGATGAGTCTCCTGCCGTTCACGGTTTTCTCCTCGCCGTAGAGGGGGTTCTTGGCGACGCCTATGGTGGGTTTCCCGAGGACTAGCCCTATGTGGGTTGCTATGCCGAGTGCCCTGGGGTGGGTTAACCCGTGTCCGTCGACGAGTATTATGTCGGGGTTTTCCGGCAGCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCTCAATGTAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 2 27493-30280 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUQX01000014.1 Desulfurococcus mucosus DSM 2161 YWQDRAFT_scaffold_13.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =========================================== ================== 27493 25 100.0 41 ......................... ATCCGGGCCGAAGTAATCGACATATTGGCCCGTAAAATGGG 27559 25 100.0 40 ......................... GTTCACATTTGCGAACACTATTCATACCCATAGACAATGT 27624 25 100.0 40 ......................... ACCTCTATCCTTATCCACTTTTCATAAATGGGCCGGTTTC 27689 25 100.0 40 ......................... TCGCACTGATTATCGAGGAGGGCTTACTCCTATGGTTCAA 27754 25 100.0 40 ......................... ATATCCCCGGCGGTCGCCCCACGGTATATGAAGCCCTCGG 27819 25 100.0 38 ......................... TCCCAGCTGGAGTAGTCATCCAGATGCGGTTTAACCAT 27882 25 100.0 40 ......................... TTATAGCTAACGCAATACGCTCGCGTCTTTCTTCCACTAG 27947 25 100.0 36 ......................... CGAATTAAGACGCCTAACCCTCCCCAGAGCCTGAGG 28008 25 100.0 39 ......................... CCAACGAGCTAGGCTGGTACGGCATCCATTACAGGGAGA 28072 25 100.0 40 ......................... CTCTAAGTATGACCTCCTCGGTAGCCCTCTCAATACATGG 28137 25 100.0 38 ......................... GTGTAATGCACCATTAAAGCCTGCGTGGTCTTTATGAT 28200 25 100.0 37 ......................... ACCCAATTGAGGTTTTCACCGCTCACATATCCCTGAA 28262 25 100.0 40 ......................... CTCGGGTTAGTGTAATTGATGCTGGTTACCTGCTGCAGCG 28327 25 100.0 41 ......................... AGAGGATCCCGAGCTACCTGAAGGCGAGAAGATAATCCTAG 28393 25 100.0 39 ......................... TTTCTTCAGCTCAAAGCCTATATCGTGGTCTAGCACATA 28457 25 100.0 40 ......................... ATACTATCGCATTACTCCAGAAGCTATTTGACACGACTGG 28522 25 100.0 39 ......................... CTATTGCTACTCCACACGCCTCCCCGCTAGTGAACCACG 28586 25 100.0 38 ......................... TAAATTGTTTAAAATGATTATCACTCAACCTCATGGAC 28649 25 100.0 38 ......................... GTGGGTACGTATATGGTGCTACCATTAGTAAGGTATAT 28712 25 100.0 38 ......................... TTGCACAGGCGTTTTCCTGCTGCTGTTCTAGTTATGGC 28775 25 100.0 40 ......................... ATTTTCTGCCTTATCTAGGCTGGCCCGGCTCATTAAACCA 28840 25 100.0 41 ......................... CTGAGGAGATCCCCGCAGAGTCGTGAGTCAAGGGCTTTTAT 28906 25 100.0 41 ......................... TTCAGCTGCTGATCAATTCTGCCCGCCCACTTCAATATTGG 28972 25 100.0 39 ......................... ATATTGGCGCCAGACTTATTATATTGAACCTCGTTTAAA 29036 25 100.0 40 ......................... GCTCTAACAAGTTGAGCCGGCTGATAGCCTTGCGGTAGCT 29101 25 100.0 39 ......................... ATGGATGACTGCTACTGGCAGTACGGCGACTATAGTAGG 29165 25 100.0 39 ......................... TATAATTATATCGGGAGTGGTTTCGGGTATATATTTTAA 29229 25 100.0 39 ......................... CTAGATCCCTGATCCTTATAGGATCCTAGACTCGTTAAG 29293 25 100.0 43 ......................... TAGCTATGTCTTGCAGGGCTTTCTCCGCCTTGCTTAAGCCTAT 29361 25 100.0 38 ......................... AAAATGTCGGGCGGGGTATTTAAGCGTTGTGTTTTGTA 29424 25 100.0 39 ......................... TTACGATCACCTTGCTTTTCTACTAGTATGAGGTACCCG 29488 25 100.0 39 ......................... TGCTACCCTTTATCAGCAACGCTAGCTCACGGGCCCACA 29552 25 100.0 40 ......................... ACGAGCTGGAAGTATACCGTGGTATACCAGGCTCCCGTGA 29617 25 100.0 39 ......................... TGGAGACCGTTACCAAGATCAATAGTAGAACTGAGATAG 29681 25 100.0 39 ......................... GTAACTTATTTTCATTTTCCAGAAGTGGTATTCTACCAT 29745 25 100.0 39 ......................... TATGGGGTTACAAAAGCTATATGGGATTAAACTGCTGGA 29809 25 100.0 40 ......................... TGTAGTCAACCCTTGCAACAGGCACAGCCGTGTACACGGT 29874 25 100.0 39 ......................... CTACCATAGGGGTAGCTTATAAACAGCTGTGTAGTGTAC 29938 25 100.0 38 ......................... CCAGCTTTTACATATATTTTAAGGTAATGGTATCCGTC 30001 25 100.0 36 ......................... AAAACATACATATATAGTCAGCAGGCGATATATATA 30062 25 100.0 38 ......................... ATACTCTCCCTCACAACCGGGACGGGATCCACCATGCA 30125 25 100.0 41 ......................... ACGTAGGAAGGTATTCCAGGATTCCTTTCCCTTATATCTTT 30191 25 100.0 40 ......................... TTAAATTTAAAGGCCTCCAACACTACCGCGTCGCCCGCCA 30256 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= =========================================== ================== 44 25 100.0 39 GCCTCAATGTAAAGAGGATTGAAAG # Left flank : CCTCAGGATTCGAGCCAGGCAGAATAATACACGTAGGGGACAACACACTAGAGGATGTTGGAGGAGCCCTTTCCTCAGGGTTCATCGGCGTATTGATAAACAGGAGAACCCGTAGAAACATGTATATCGAGGAACTGAAGGCAGCAGTAATCAACGACATGAGAGAACTACCAAAACTCTACCACGAGATATCACGCACAACATGCACATGAAACACAACGATACAGCCAATCCCGACACCACACCCTAAATCAACCAGTCCTCAAGCCTCCAAAGCAGTACAACACGCAAACCCCGTACCCCCGTCGCGGGAAACCCTGAACACCCCTCGTTGTTTTTGGTCGAAGTGATCGCTTTATACAAACAGGTTGATCACCCGATTCTGGATCCCTCCCGTTGATACTGGTCGAAGTTGCTCCGCATACTCTTTCCAGTTAAAACCGTAAGATATTTAAGGCTGCGACCCAGGAAACATAACATGTAGAAGAACTTCGACAAAT # Right flank : GTCAGCAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGTAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 14641-14989 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUQX01000022.1 Desulfurococcus mucosus DSM 2161 YWQDRAFT_scaffold_21.22_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 14641 25 100.0 39 ......................... ACAATGTGATACTATTCGAGGTTCCCCAATACATCAACC 14705 25 100.0 41 ......................... TGTATTACGGAGGGAGACACAACATTAACGGTTATATTGCT 14771 25 100.0 41 ......................... CGGCTATCCCCCTCCCACTATTATCACTCTGGGAGCCTGGG 14837 25 100.0 40 ......................... TTGAATAATTGCTACTTCCGGCACTAGTGGTTATGGTGGC 14902 25 100.0 38 ......................... GCTATACGGCTCATGGTATAGCCTTCGTTCGCGAGTAG 14965 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ========================================= ================== 6 25 100.0 40 GCCTCAATGTAAAGAGGATTGAAAG # Left flank : CAGGGCCTCGAATAATCCTGCCCCCAGCACGAGGAGCTCGGACTCTACGATAATCGCGTCGTAGCTCCCGAGCAGGTGTGTCAGTTCCCCTCGGTTCCTGGGCAATGCCAACATAGACTTCCTCTACCTCAGCTTCATCTCCCCCTCGTATCCACAGTAGGCGTATCCACAGTAGGGGCACTTGACCAGGGAGCCTCACCCATGTATTCTTCTCCAACACCGTAAATAAAAGTTTTTCCAGCGATGTGAAACCACCTGGAGAATGCTTCACGCAAATCTATCCTACGCGTAGATTTAAATGCTTGAAGCAGTAAAACCAAGGTCTCTCTCATTGATTCTTAGTCGAAGTGATCGCTTTATACAAACAGGTTGATCACCCAACTCTAGATCCCTCCCGTTGATACTGGTCGAAGCCGCTCCACGCCCCCTCACCAGTTAAAACCGTAAGATATTTAAGCTGCGACCCGGAAAACATAATATGTGGAAGAGCTTCGACAAAT # Right flank : | # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGTAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 77353-75781 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUQX01000003.1 Desulfurococcus mucosus DSM 2161 YWQDRAFT_scaffold_2.3_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 77352 24 100.0 41 ........................ TATACATTGGCGCCGGAGACACCTACCTATATGCTTTTAAG 77287 24 100.0 40 ........................ ACCTTTAGCCATCAGTATCAAGGCTAACGGGATGAGGAAG 77223 24 100.0 41 ........................ TCCTGTCCCCGCAGACAAGGTCGTAACCTAGACTCCTCCAG 77158 24 100.0 43 ........................ CGTTGTATAATGGTTGCCGATAGAGCTTAATAAGGCTGACTAG 77091 24 100.0 39 ........................ TGTTGCTGAGTATGCTGCCCATGACCGTGATGATGAAGG 77028 24 100.0 41 ........................ ATGATTGGGCGTGAAAAGATGCCTGAGCTCAACAAGCATTG 76963 24 100.0 42 ........................ TTGGCAAATGAAAAAAGCTTATTCACCACTCTTCCTCTACCG 76897 24 100.0 41 ........................ TGATATTTGGAATATGACACCCTCCAACAATGAAACCGGGG 76832 24 100.0 44 ........................ AATGGGACCTTGTACACCACGCTATACATTTTCAGCAGCGTGTG 76764 24 100.0 41 ........................ CCGATGCATATCTTGAGGCTATTCCAGATCCATACACAGTG 76699 24 100.0 40 ........................ GCTGAAAATCCTTCCACCTCCTCTTAGGCTCCTTTTCCCG 76635 24 100.0 39 ........................ CCATACTCCCTAGCGGTTTCTGATAGCTCCTGCCTTATA 76572 24 100.0 40 ........................ TCCACCCGTGCATCAACCACAAGCTGCTGTTCATTATTTA 76508 24 100.0 41 ........................ ATAGTGCATGCAGTTGCATGCAGTTTCTTAGATTTTTTTAA 76443 24 100.0 41 ........................ TTCAAGATGAGATATCCCCTCTTATAGGGGAGACCGTGCAA 76378 24 100.0 40 ........................ GGAAGTAGACCACGAGTTGAGCTATGAATATGAGGCTGGA 76314 24 100.0 39 ........................ CAGTCAAAATGGCATAGGTCTTGGGTCATGGCTTTCAGA 76251 24 100.0 39 ........................ AGATAGTGTGTCCCGTTAAACCATGTGGCGTCTAATAGA 76188 24 100.0 41 ........................ TATGGAATGTATTGAGGTGTCAATAGTGGGAGTGAAATCGA 76123 24 100.0 38 ........................ TCCCTGCTCGTCCTGATCGCGGTCGGGGCGGTGCTGCA 76061 24 100.0 41 ........................ TTGCTGCTCTAAGGAAACTTGACATAAGACTGTAACCCTCA 75996 24 100.0 40 ........................ TTAGTTTGTATAATGATTTGATCAAGAGTGATCAAGCTAA 75932 24 100.0 40 ........................ AGCAAGCCACGCAGGGCGTCGCACAGCAGAAACCCGTGCA 75868 24 100.0 40 ........................ TACTCGTAACCCTAGTAAACCACTTAAGTGGATAGCATTG 75804 24 91.7 0 ........C.G............. | ========== ====== ====== ====== ======================== ============================================ ================== 25 24 99.7 41 CCTCAATGTAAAGAGGATTGAAAG # Left flank : | # Right flank : GTTACATGTGTTTTCCCTTGATGTACAGGTAGATTATGTGGGTTAGGTTGTTTTCGTCTTTTACTTCGGCTGTTTTCTCGTGTTTCCAGCCTGGTATTCTGAACTCGTGGCTTACTACTCTGGCTCCGTTTCTCAGTTCTCTCTCTAGTTTTGGGCGGAGCATTTCGTTGACTGATGTGAGTAGGAAGAGTGTTACTATTGTTGCCTCGCTGATGTCGACTTCGAAGAAGTCTCCTTGCACTACTATTGCCCTGTCCTCTATTCCCTCCTCGCTTATCCTCCTCCTCGCCTCCTTTATCCTCTCGCTGTCTCTCTCGACGCCGACGGCTTTCCTCACGTTGAACTCTTTCACGGCGACTATGAGGATGCGGCCGTCGCCGCAGCCGAGGTCGTATACTACGTCTCCTTCACCGGCCCCGGCGAGCCTGAGCATTTCCCTGACGACTGGGTATGGTGTGGGGACGTATGGTACAAAATAATACATGAGTCCTCCCATCGAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCAATGTAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //