Array 1 96830-95841 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWES01000017.1 Klebsiella oxytoca strain WCHKO085006 NODE_17_length_154300_cov_73.4626, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 96829 28 100.0 32 ............................ TTATCCACGGCTTCCAGCAACTCGGGGTTTTC 96769 28 100.0 32 ............................ AAATGGGCCGCCAACGAAAGCAAGAGCACCTC 96709 28 100.0 32 ............................ AATACTGGAAGGATATTAAGCGTGGCGGTATT 96649 28 100.0 32 ............................ ATATCCGCCGCGCCGGATAAGCCTTGCTGCCC 96589 28 100.0 32 ............................ ATCGTGTCTGGGAGAATGTCTTTGCTCATAAT 96529 28 100.0 32 ............................ TGAAATTGATAGAAGGTTCTGAGCAAACCTGC 96469 28 100.0 32 ............................ ACGATGTGAACGCTATCGCTATGCACACCACT 96409 28 100.0 32 ............................ TCGGTGCGCAGTCCAGATATTGCGATATACAC 96349 28 100.0 32 ............................ ATTAAAACCAATAGTCTGACGATCCAGCGCCA 96289 28 96.4 32 ..........C................. AGATAGCACCGCCTGGGCGCATATCTTTCGCC 96229 28 100.0 32 ............................ CGATGCCTCCGATAAGAGAAAAGGCGTTCTCT 96169 28 100.0 32 ............................ CTGGAAACATAGCAAATGGCACCGTGTTACAA 96109 28 100.0 32 ............................ TCAAAAAGTACGGACGGTGGACGGTGAGCGAA 96049 28 100.0 32 ............................ ATTCGCGTTAACTACGAAGACAGTAACGGTAA 95989 28 100.0 32 ............................ AGATAGCCACCGCCGAGTAAGACGATTGCCCC 95929 28 100.0 33 ............................ CTGACCGGTATCAATTACGCGCAAATCCATTTG 95868 28 92.9 0 .........................TG. | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TAAAAGGATGGCGTTGCGTCAGTCGGGTACAGGTAAAAAGCAGCCCCGAGCGGCTGATGCGCCGCTCGGTGAGAAAAGGCTGGCTGACACAGGATGAAGCAAATGAGCGATTGCTTAGCATGCGGGGAGAGTCGACAGCGCTCCCCTGGTTGAATATGAAAAGCCTCTCAAATGGGCAGAAGTTTCCGCTATTTATTTGTCACGGTGAGCTGCTGGCGCAGCGCGTCGCGGGAACATTCAATAGCTATGGGCTGAGCCATATCGCGACTATCCCCTGGTTTTAGCATGTTGGTGAGAGTTTTTGACGAGTGCTAAAACAAACCATAACCGGCGCGGTCTTTCGCGCCGATTTTTCAATCGCTAATTAAAACCCTTTTTTATGATGAATCTCTATCTTATTGATTTTATATAGTGATTTTATAAAAGTCGGAAAAAGGGTTGTGAAGAGGGGAAGGCGTTTTTTGGCTTTTTTATCAGATGGTTATAGTGGTTAGGCTTCA # Right flank : TCGTGGCGGTTACGGGCGCAGAGACAGGGCCGTCAAAGCCGAAGAGGGAAGCGGCGTGAGAATAAAAGAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGTTAAGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATTGCCCGTAATTCACGCGGATAAACCGGGCGACAGGCGCAAACGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 106608-105258 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWES01000017.1 Klebsiella oxytoca strain WCHKO085006 NODE_17_length_154300_cov_73.4626, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 106607 28 100.0 32 ............................ AAAAACTGAGCGGCCGCAGAATGAAGTTGTAA 106547 28 100.0 32 ............................ TCATTTGGCGACGTGCCTTGTGCGCGCATTTC 106487 28 100.0 32 ............................ GTCAAAAGAATGATTTCCTGCACAGGGTTCAA 106427 28 100.0 32 ............................ AGGAGCGGGTCATATTCCACCGTCGCGGCTTT 106367 28 100.0 32 ............................ GGAAGACTGGCCTAATTATGAGGTGCGTTATC 106307 28 100.0 32 ............................ TGCAGCAGCGGGTAACGTTCCTGACGACGACC 106247 28 100.0 32 ............................ CAATACTCACCATTGATGAGCAACGATAAAAA 106187 28 100.0 32 ............................ GTAACCGCATGTCGGCTTTTGCTGCATGGTGG 106127 28 100.0 32 ............................ TTCGGCCATACCGCGATACGACGCTTAACCAG 106067 28 100.0 33 ............................ TCGACGCGCTGGCCTCGCTGCTGATTTCTACGA 106006 28 100.0 32 ............................ TACCGGACAACGATCACCCATTGTCATGTAAC 105946 28 100.0 32 ............................ TGTAATGGCATCGGGAGGCTGTCATGTGGATA 105886 28 100.0 32 ............................ GGCTGCGTCGGGACCCACCACATCGCCAGCAG 105826 28 96.4 32 ........T................... CCTGGCCCCGGCAGTATCTATGATGGTCAGGG 105766 28 100.0 32 ............................ GGAAGAAATCACCGCCATGCTTACCGCAGGAG 105706 28 100.0 32 ............................ TGCCGTGGCGGGGTTGGCTCCAGCCACAATCC 105646 28 100.0 33 ............................ TGCGGCTGCACGACCAGCGTCAGGGAAATCACT 105585 28 100.0 32 ............................ CTCTTCGCGTCTGCGATACCGGAAACGGAGAC 105525 28 100.0 32 ............................ ATGCACCGGTAGAAGAACGCTGATCAATTGCC 105465 28 100.0 32 ............................ GTAAAGACGCTACCAGGCACATCGCTGAATAA 105405 28 96.4 32 ............G............... TCGACATCGCCGAGAGCGGCGTAGCCGTATAG 105345 28 92.9 32 ............G.......A....... TGCCCGCCGAGCCGGAAAGCGACAGCGGTAAA 105285 28 92.9 0 ....T.C..................... | ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTTATCCATCAGGTGGTGGATAAGTTTATCGTTGAGCTGCAGGTCCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTAAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGTTACGACCGGGCCATGGGCGCGCGTCCGATGGCGAGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAACGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGTCAGGTGATCGTTGAGCTGGATAAAGAGAAAAATGCGCTGACCTATGCCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCGGCACATTAAGTCGCTTGCGTGAAACGTCAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCGATGTCCTGGACCCTTTTTTATTCCCCTTTTTTAAGCTATTGATTTTATTAAAGAGAAAATCTGGCGTGAAATTATGGTAGCAGAGAGGGGCTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTCGTTCGTTCA # Right flank : AGAGCTTGCCCATACTGCGGTGCAGGCTAAAACGATTCTAAAGAATTTGCCAAAATAATAGGCTATTTTGCAATTTGCGATGAATGTCAACGTATTACCTCTAATATACTGTTTTTATAAACAGCTATCGACACCGAGCCACAGGATGTGACTATGCCCGCGAACTATATTGCCCCGTCGGATTTAAAAATGATTCTCCATTCGAAGCGCGCCAATATTTATTATCTGAAAAAGTGTCGGGTTCAGGTCAACGGCGGCCGCGTGGAATATGTTACGAGCGAGGGGAACGAGTCATTCTACTGGAATATCCCAATAGCAAATACAACGGCTATTATGTTGGGAATGGGAACCTCAGTTAGCCAGGCTGCAATGCGTGAGTTCGCCCGAGCGGGCGTAATGGTCGGTTTTTGCGGTACGGATGGCACGCCTCTTTATGCCGCTAATGAAGTCGATATTGACGTTTCCTGGCTGTCCCCGCAAAGCGAATATCGACCAACTGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //