Array 1 1125-561 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUCX01000024.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00021.21_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1124 28 100.0 32 ............................ AATAAGATATCCAAACTCCGTTAGCATCAGGC 1064 28 100.0 32 ............................ ACGGATATTGCTTGCAGACATGCTTAATGCTG 1004 28 100.0 26 ............................ AGTTTAAAACTGTACGTTCCGGGGTT 950 28 92.9 32 A.A......................... GGAGAGATAGCCGAAACCGTTCAAATCAAAGG 890 28 100.0 32 ............................ GCTTTTAATGTATAGTTCCATTTCGCAGTAAA 830 28 100.0 32 ............................ GGATTCAATTTCAACTGATCCTAAAATTGAAT 770 28 100.0 32 ............................ AAGTCCTTTAACGAAAGCTTGAAATACTTGTG 710 28 100.0 32 ............................ TATTAAATTAGGAATATTTACACGAATATATC 650 28 100.0 33 ............................ ATTCCTGCATCAAAGTTGTTATTTCATCAGTGA 589 28 100.0 0 ............................ | A [567] ========== ====== ====== ====== ============================ ================================= ================== 10 28 99.3 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : ATACAGAAAATCTTATTAGTATAATTAGCAGTCAGTCCTATTGGGATAATTTTTACGAAAAACTGCCTATAATTCAAAAAAGATGTTTCGGAGACTACACACTTGAAGGGGCAGACGTTAAAACAGCTAAGTCTATTTTAAGTGCATACAGTAAAGGAACCTTTGGGCTTGATGGATATTTGATAAAAACCATGTGATAAATTTTTCGCCTCTACACCCACGGACTTTTGATATGCTAAACTCGAATTTCATTGATTGGGAAAATATTTTAAACACTCATTATTTAATGTGAATCAACTTTATTTGTATTTGCTGATTTTTTTACCAGCTGCATCTTCTAAAAAGCTATCATACAATATCTTACCTTTTTAACCCTTTTTTTAAGCGTCAAAATTAAATCATAAAATTTAACATGTTATGAAAGATAATAAAAAAAAGGTTTTTTTTACTATTTGGGGCATACCCTTTGATTTCTAACGAAGAATAGATAAACTACTCTA # Right flank : CTCACCAAGTTGTACAGGTATCAAATGCCTACCACCGCGGTTAATCTTTAGATTGCTCACATTATTAGTCTCTTATCCACAGTACCTATTTTGATTGTAAGGATTCTTTCCGGAGAGTCGTGAATCCAGTGGGATTTTGATGAGGTCGTTTGCGGTATACCAAGAGGGAGAAATTTACGGTTGGGATGCGTGAGAACTTATCAGAGGGCAAAAAAAAGGCCCTGAGTGAATTACTCAGGGCTTTAAAAAAAAAGTCCTTGCGACGACCTACTTTCCCACTAGCTACCTAGCAGTATCATTGGCGATGGAGGGCTTAACTTCCGAGTTCGGAATGGGATCGGGTGTGGCCCCTCCTCTATGGTCGCAAGGACAAATATTTAAAAATATATAGTAAAATAGGGAAGAGAAGAAAGATAAGACTCACGATTTATTAGTACCGGTCAGCTGAGAGCTTCACAGCTCTTACACCTCCGGCCTATCAACCAGGTGGTCTACCTGGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 68946-69094 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUCX01000023.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00020.20_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 68946 28 100.0 32 ............................ GTCATTCATTTCGTATTCATACTTGATAATCA 69006 28 100.0 32 ............................ TTGAAGCTGCATGGTTGAAACACTACCTCGGA 69066 28 100.0 0 ............................ | A [69088] ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : AATAATCTTGATAAATCTTCAGACCGAATTTTAAAATTTTAATAAGTTACAAATTCAAGATCAGTGAATAAACAATCCTACTTTACTTTTGCCCAATTCTCTATTTTAGAACTTCAATTGATAAATAAGACTTTCAATTACAGTATCATATCTAATCAAAATTTAATAAAAATCCTACATTACCAACCCCAGTTGAGGATTCTTAAGGGGATCATCCCCTTAAGCCGCCGGAGGCATATGAGGACAGACTATGAGGTTATATTCATTTGAGATAAAATTTACTCCCACCAAAATCATTTTGCGATCTTAATAAAAATACCTGTGAGTGAAGAGTTAGCTAAAAAGCTCTTATACGATATCTTACCTTTTTAACCCTTTTTTTAAGGATTAAAATTAAATCATAAAATTAAGTATGTTATGAAAAATAGTAAAAAAAAGGTTTTTTTCACTATTTGGGGCATACCCTTTGATTTCTAACGAATAATAGATAAACTACTCTA # Right flank : ACTCACCAAGTTGTACAGGTATCAAATGCCTACCACCGTAGTTAATCTTTAGATTGCGGATAGTTTAGTATCTTATCCACAGTAACTATTTTGATTGTAAGTGTTCTTTCCGGAGAGTCATGAATCCAGTGGGATTTTGATGAGGTCTTTTGCTGTATACCAAGAGGAAGAAATTTACGGTTTTGATGTGTGAGATTTTATCAGAGGGCAAAAAAAAGGCCCTGAGTGAATAACTCAGGGCTTAAAAAAAAAGTCCTTGCGACGACCTACTTTCCCACTAGCTACCTAGCAGTATCATTGGCGATGGAGGGCTTAACTTCCGAGTTCGGAATGGGATCGGGTGTGGCCCCTCCTCTATGGTCGCAAGGACAAATATTTAAAAATATATAGTAAAATAGGGAAGAGAAGAAAGATAAGACTCACGATTTATTAGTACCGGTCAGCTGAGAGCTTCACAGCTCTTACACCTCCGGCCTATCAACCAGGTGGTCTACCTGGAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 70393-70064 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUCX01000005.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00003.3_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 70392 28 100.0 33 ............................ AGAGTGATAATCTGGACAGCATTGAGGTTTCGT 70331 28 100.0 32 ............................ CGCTTTTCCTGCTGTGCTATAAGCTTTGTATA 70271 28 100.0 32 ............................ TGCCGCCTGCCAAGTATTTGTTATATTTACAA 70211 28 100.0 32 ............................ GTAGAAAGACTCGACAGATATAACCACTTCTG 70151 28 100.0 32 ............................ TCTTCATCAGGATCTGCTACAAATTGCGGATC 70091 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 6 28 99.4 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : AGCCACTCAATATCTTCTCTCCCGGCTACAAAATTCTGAAAAATCCTGAGTGAAACCCACTCGTGACGGTATGGATCAGCTATTCGGGCTGATTTCTTTAATTTTTCCTGAAAATGAATGCTGGCTTTGCCTGAATCATGAAGGAGAGCGGCAAGAACTGTGAGCAGCCGTATAGATTCTAAAGAATTCCAAGTATTCTCGTCATCTTTTCGCAGAACATTGCTATAGGTAATATTGGTGGGAACAGCTCCCTGCTCATTAAAAGATGGGGAAATATCCTTCATATTCGGCATATAATCCCATTAAATTTATTAATCAATATTTATACGATATTTATATATTCTTTTTCATAAAATGTTCTTTCTGGTGACCCTTTTTCACAGCACAAAATATAAATGTTTAAATTCAATATCTTACGTTTTTAGAATTTAAAAGGGTATTTATTGTATTTTTAAGATGTACCTATTGATTTTAAACAAATATTCTCTAATACTGCCCTA # Right flank : CCCCTTACATTTTCAGGCGAGACAGCCCACTATTAAGAAGGCGATGTTGGCGACAAGCGATATTATCAGGGCCTGCACCCAGCTGAGTCGGCTTAGGAACTTATATACTGCGCCTTCCGCGGCCACGGTTGCCAGCTCAAGTGTTGCCAGCATGCCGGATGTAACTATGGAGTAGTGATTTATGAGGTATCCCAGCACTGGGAGTGTCACAGCCTGAGCCAGAAGGACTGAGAAAGCACTGCGAAAAATTCCCGGACCACCGAGGCGGAAGACTAGACGGGTAAACACAAAAAAGATCAGTAATTCCAGAACAAATGATACAATAAAACCAATCAGCAGCAGGTTTACAGGAGGATAATTAGGCACTTCCCGAAACTCTTTCTCGCCTTTTTTTGTTAAGGAGAAGACTCCGTTACGGATAGAGATGGTGTAATAAACTTCTTTCCCACACACTGAAGAAGGTCCGGGAATAAGTTTACGGCCGGATTCTAGTGCCGCCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 929-781 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387016.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00009.9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 928 28 100.0 32 ............................ AGCAGATGAATCTATTACCTTTCAGACAACAG 868 28 100.0 32 ............................ TGATTGACTGACTTCGATAACCGCGCCGGATA 808 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : AAAATTAAATCATAAAATTAAGTATGTTATAAAAAATAGTAAAAAAAGGTTTTTTTTACTATTTGGGTCATACCCTTTGATTTCTAACGAAGAATAGATAAACTACTCTAGTTCACTGCCGGATAGGCAGCTTAGAAATCCGAATCGAATCTGTTAAACTCCCTGAGTATGTTCACTGCCGGATAGGCAGCTTAGAAAAACCGTTTTTAATAATTGAAAAATCACAGACAGTTCACTGCCGGATAGGCAGCTTAGAAATTTTATTAAACCTTTCTTTAAGTTCCCAATCAAGTTCACTGCCGGATAGGCAGCTTAGAAAAGCAGATGAATCTATTACCTTTCAGACAACAGGTTCACTGCCGGATAGGCAGCTTAGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CCACCCCTGCTTCTTTTTTTGCAAGACCAAGCAGTTCACAAACGGATAGTCATTTCCATTAAGTGCATAGAACCAACTGAGCCTACCACCGCAGTTAATCTTTAGATTGCGTACATTTTAGTATCTTATCCACAGTACCTATTTTGATTGTAAGGATTCTTTCCGGAGAGTCTTGAATCCAGTGGTATTTTGATGAGGTCGTTTGCGGTATACCAAGAGGAAGAAATTTACGGTTTTGATGTGTGAGATCTTATCAGAGGGCAAAAAAAAAGGCCCTGAGTAAAAAACTCAGGGCTTAAAAAAAAGTCCTTGCGACGACCTACTTTCCCACTAGCTACCTAGCAGTATCATTGGCGATGGAGGGCTTAACTTCCGAGTTCGGAATGGGATCGGGTGTGGCCCCTCCTCTATGGTCGCAAGGACAAATATTTAAAATATATAGTAAAATAGGGAAGAGAAGAAAGATAAGACTCACGATTTATTAGTACCGGTCAGCTGAG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1319-1050 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387016.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00009.9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1318 28 100.0 32 ............................ TCCGAATCGAATCTGTTAAACTCCCTGAGTAT 1258 28 100.0 32 ............................ AACCGTTTTTAATAATTGAAAAATCACAGACA 1198 28 100.0 33 ............................ TTTTATTAAACCTTTCTTTAAGTTCCCAATCAA 1137 28 100.0 32 ............................ AGCAGATGAATCTATTACCTTTCAGACAACAG 1077 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 5 28 100.0 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : TAGACTGAGCACGCACAGGAGCATTCAAATTTAATTTCCATGACTCAGCATCACCACCAAACATAGGTGTGATCAATTCAAATTTAAAATCTTTTGTGATTATTTTACTGCACTTAGAGTTGAATCCAGGTAATTTTTGTAAAAAACTATCTCTCATTATCCCTCCATAATTCGAAGGAGTTAATACCACATTAAAGTCGACTAGATAATTTCCAATATAACAGAGGACTATAAATATCCAGTATTTCTATAAGAGAGTAAATAATCACAGCACTAACAAACTAACTTTAAATAGTTGATATGAATTCCAGTGCTAAGGGGATTATTCACGGCCAAAGAATGCCTATTGACGATATTCAATTTATACTTTTAACCCTTTTTTTAAGCATTAAAATTAAATCATAAAATTAAGTATGTTATAAAAAATAGTAAAAAAAGGTTTTTTTTACTATTTGGGTCATACCCTTTGATTTCTAACGAAGAATAGATAAACTACTCTA # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCACTGCCGGATAGGCAGCTTAGAAAAGCAGATGAATCTATTACCTTTCAGACAACAGGTTCACTGCCGGATAGGCAGCTTAGAAATGATTGACTGACTTCGATAACCGCGCCGGATAGTTCACTGCCGGATAGGCAGCTTAGAAACCACCCCTGCTTCTTTTTTTGCAAGACCAAGCAGTTCACAAACGGATAGTCATTTCCATTAAGTGCATAGAACCAACTGAGCCTACCACCGCAGTTAATCTTTAGATTGCGTACATTTTAGTATCTTATCCACAGTACCTATTTTGATTGTAAGGATTCTTTCCGGAGAGTCTTGAATCCAGTGGTATTTTGATGAGGTCGTTTGCGGTATACCAAGAGGAAGAAATTTAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 8935-9252 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387016.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00009.9, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 8935 36 100.0 34 .................................... TGAGGCGCTCACCCAAGTGTTCAACTATGCCGTT 9005 36 100.0 35 .................................... AAGAAGATGGTTAGGTAATCACCATTTTTACCCGA 9076 36 100.0 35 .................................... ACCATTAAATATAACACAAAAACACCATTCCAGAA 9147 36 100.0 34 .................................... TTTTTCCATTGCCTATAGGATAGAATCACCAAAA 9217 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 5 36 100.0 35 CTCAAAAGAGGTTTCCGATCTGGATCGGGTTTTGAC # Left flank : ATAGCAAAGTAGTCAAGGCGTTGTCTTATAGCTGGAGTGATATTGCCTGTTCTTTTGATGATTTGCTGGAACGGATAGAATCAGGCCAAAATAACTGGCCTCCATTAAAGGATTTACAGCAATATATTGAAGGTGTTTTTTCAGGAGATGAGCTGGAACTTTTGTTGTGCGCCTTGGAGGAGAAAGGTTTTTAAATTAGTCCATAGCTATGCTGGTCTTAATTCTAACCTACATCTCTAAAGGATATAATTTTTTTACATGAGAGTTATGGTTTTGATAGCTGAGTGACTCCTCAACTTTATTTAACGTTTTTTTCTGTGGATAACTATTTAGACTGAATTATGCTGTTTCATAATTAATTGAAATAGCAATATAAAATAATAAAAAGTTGCGAGCTAAAACTACGTCCTTAAAAATGGTGTGGAAAAATGCTCACTCATTAGACGTAGCTGAAAATGGCTTTGCAAGGTGCTGAAAATTGGCTAAAAAAAAGTCGACCT # Right flank : CACGGCATCTCCACACATCGAGTTCCATGTATGGAGATTTTGAAATTTGTGTTTGTGTGGGAACGGGAATGGAAAAAATGAATTTCCCCTTGACGGGATCACGAGTTGTGGGCAATTTTTGATTTATGACTAAAATCACACGCTACCTCGTAGCTTACGATATTTCCTGCAATAAGGAACGGTATAAAGTTTCCAAAGTTCTTGAAGGTTTCGGGTTCAGGATGCAGGAAAGCGTTTTTGAGTGTGATTTAAGTCCACGGCAAAAAGATAAGCTTGTTATTCAGCTTGAACAGCTTAATGTGGAAACAGGCTTTATTTCCATATATCTCCTCGGGAATCATAAGCCCAAAGATATTGGTAATGCTCCACCACGTTTTAATGAAAATTATGCTTTCGTTATATAATGACTTCAGATTTCAGTTCCTTCTACTCCCTTAACTGGCATAGTATTAAAATTTCTCTGACCAATACCCGTAATAAGTTTGCGAAACAGCATCCGC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAAGAGGTTTCCGATCTGGATCGGGTTTTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 4 12765-12518 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387016.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00009.9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 12764 37 100.0 32 ..................................... AGAACAAGGCCGCTGGACTAACTGAAAAAGTC 12695 37 100.0 34 ..................................... AAAAGAGCAAAATAATTCTCCCTAGTCTCTAGGT 12624 37 97.3 33 ....................................T GTTAAAGCCCCTTGTTTCCAATATAATTGGGCT 12554 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================== ================== 4 37 99.3 33 GTCAAAACCCGATCCAGATCGGAAACCTCTTTTGAGA # Left flank : AAAAAATAAAGGTCGTCACAGAGCAGCCTTTATTGTCGACCTGCTTTCACAGAGCAACCTTTTAAACTCTTTTAATAAAAACAAATCAAAGTTGGATCTTGATAATATTGATGACGTAATGATCTTTCATTACAATTGGAATAAAGGTAGAAATATTGAGCAAAAAGATGTGTCCGATATTTTATGCGCTCTGGACAAAGAATACCAAGAAATTGAAAACCAGTCACCTGACGTACTCTATCTTTTTTATGGTGGCCCGGTAACGCTCAATGCATACATAGGTTCCCTTTTAGCCAACAGAATGTTGACCCATGTCTACCACTATTCAGCAGGTGAGTATGAATATTGGTATTCTTTAAATATCAAAAAATAAAATCAACTATAATTAGTAATAAAAAAGGCTGCATGTAGATTAACATACAGCCTTTTTTATTGTCATTTTCCAGATCGGAAACCTCTTTTGAGCCGCCTCTATTGCTGCATTAGTAAAACTTCTTTAA # Right flank : GGTCATCTTTTTTTTACTCCATTTTCAGCACCTTGCAAAGCCATTTTCAGCTACGTCTACTGAGTGAGCACTTTTCCACACCTTTTTTAAGGACGTAGTTTTAGCTCGCAACTTTTTATTTTTTATAATATTATTTCAAAATCTTATAAAAAAGATAAATTCGTATAAAACCATTATCCAAAGTATTCCCGCTAAAAAAAAGTTGAGAGCACGCTCAGTTTTTTATCCGCATAAAAAATTAAATTATTTCAACCTCACCCAAAGTAAGATTGCGTTCTCCGCTGCGAAAGAATTTCAAATCGTCACGTTCATACACCCAGTTCCGCAAATTCTGCACCTGTGCATCTACCAGCTGTGCAAATGTTCCGGACTCAGTTGCTATTCGGATACACATTTCCCTTTCAAAATGCTCAAGCACCTTTCCCATACTGCGTCCTGACAGCTTGAATTTAATCGGTGTTACATTTTCAAAATCTTTTTCAGTAATAATATTCTTGTTC # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAACCCGATCCAGATCGGAAACCTCTTTTGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //