Array 1 1877553-1876848 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_013223.1 Desulfohalobium retbaense DSM 5692, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                                        	Insertion/Deletion
==========	======	======	======	=====================================	=======================================================	==================
   1877552	    37	 100.0	    35	.....................................	TGGTTCCAGCCGCCGGGGGTGCTCCAGTTGACGAA                    	
   1877480	    37	 100.0	    35	.....................................	ATCTACACGCTGTTCCACCATGTTCCGCTGCTCTG                    	
   1877408	    37	 100.0	    35	.....................................	ACCGATTTCACCGCCCTGACCAATGACGGCGACAA                    	
   1877336	    37	 100.0	    34	.....................................	GACAAGAACGACAGGTCCCTGTTCAGGGCCGCCG                     	
   1877265	    37	 100.0	    34	.....................................	TGGTTCCAGCCGCCGGGTGTGCTCCAGTTAACGA                     	
   1877194	    37	 100.0	    37	.....................................	CGGCACATCGGATGCGACCCCTTGGGCCGGGGCAAAC                  	
   1877120	    37	 100.0	    34	.....................................	TTCATCACTGCGTATTTTGTGGGCCGCTCCCATC                     	
   1877049	    37	 100.0	    55	.....................................	ACGGTTGGCGAGTCGGTCAGCAACGGCTCTGGCGTGTCTCAACCACCACCAACAT	
   1876957	    37	  94.6	    36	...............A..........T..........	GTCACCGGTGCGCTGCCACCTGAGCCGTGCGTGTAG                   	
   1876884	    37	  86.5	     0	...............A..........T......TTC.	|                                                      	
==========	======	======	======	=====================================	=======================================================	==================
        10	    37	  98.1	    37	GTCTCAACCACACTGCAAAGTGTGGCCCCATTGAAGC	                                                       	       

# Left flank :   CGGCATTGCTCTATAATGGCCTAGCCTGGGTTTATCATAAGTATTGCGGACAAGATTTTTGTGGCCGCTGGATCACCTTGGAACGAAAGGCGAAGCTCGCCAAGCGGGGGCTGTGGGGGCAACCAAATCCGATCCCCCCTTGGGAGTGGCGGCATGGTGGCCGTTCTGGTAGCCAGAGTAGAAGCGGGGCTGGTGGCGACAAGGATTGTAGCGATTTTTCGACCCAGGCCCAGGCGCAGCGGTTCTTTGAGGCCCATCAACCCGGCGACCCCCACCAGTTGGACGGAGATGGGGACGGGCAGGTGTGTGAGGGGTTGCCGTGAGTCGGGTTTGGTGCGAACCTTGAGCTGTCAGCTCATTGCCGCCAGGTTCGCGACGTAGTCAAAACAGGGTGTTAGAGAGGAATTCTGGTTCTTTGACAATTGAATCGATTTTTTTGAAAAAGGGTTCGCGGTGATAGGGCCGAAAACCCGGTTGCAAAGCGAATTTCTCGGCTAAGC
# Right flank :  CAGGCCGTTCCGTGAACAGAGGATTTTATTCCAGCGGCTGGAATAGTCCCAAGCCAAAATGGCCCCGTGCGCCAAGCGCAAAAGGGCCAGGTACCGGTGAGTCGAATCGCAGGATGCACCCATGCCCGCGGAAGGGGCGTTCCTCTCTTTTGCCTCGGGTAAATTCCATCCACCTGATCGGCTGGGGGCCGTTCATGGTCCACTGAATCCAGTTGACCTCTTGTGGCTGTGGAAGAAAATGGAAACGGCATTCACGCTTTATCTCCCCGGTAAGCCACCCCCAATATGTCCCTCTGCCTTTGCGAAAATGCCGAGCTGTGACAAAAGGGGTAACACTAATCCAGGTTTTTGCATGTTTGGGGCGTGCGTTTTTCTGGACAGATGTCAGGATTAGGCTTGCATCTGGTTTGCCATGGGGCTGCCAGATGGAGCGCAGTCGATCCAGAGCCATCAATTCTGTGGAATCAAACGGCTCATCGGCCGTAATGAGTAGATGGTCA

# Questionable array : NO	 Score: 6.07
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAACCACACTGCAAAGTGTGGCCCCATTGAAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [7,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-11.70,-11.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.78   Confidence: MEDIUM] 

# Array family : NA
//