Array 1 194117-191540 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIPRJ010000003.1 Leclercia adecarboxylata strain 36MP8 NODE_3_length_369392_cov_10.460339, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 194116 29 100.0 32 ............................. CATCCACGCGCGCTGCCGTAATCTCGGAAGTA 194055 29 100.0 32 ............................. CCCTGGGGCAGTGTCTCAGCACCGGCACCGCC 193994 29 100.0 32 ............................. CAATGCTGAACGCGGGGAATACTGAACGCAGT 193933 29 100.0 32 ............................. CTATCGATGAGTATATTTTTGAAAATATCGGC 193872 29 100.0 33 ............................. TGATCAGTCCCCGCGAGCACTTTGCCGGTGTTG 193810 29 100.0 32 ............................. AATCGGTCATTCTGTATCCTGCATAAAAAAAC 193749 29 100.0 32 ............................. CCATTAACTGGCTTGTCTCTTCATCTGTGGCA 193688 29 100.0 32 ............................. GGTAATGTTTCTGCCATGTTCAGGGGCTGAAG 193627 29 100.0 32 ............................. GGGCTGCAACAACTGGCACAACGGATGTCAGC 193566 29 100.0 32 ............................. AATTTCGGCTCCGAACTTGGACTGCTGGCACA 193505 29 100.0 32 ............................. CATTTAGATTCTGCCGATACATCATCACGATA 193444 29 100.0 32 ............................. CGTACCGTCAGGCTTTATTGAATATAACCAGA 193383 29 100.0 32 ............................. GGCCGTATTCAACGCAAATAACCAGGGCGATC 193322 29 100.0 32 ............................. TGCCTACCCAGCTAGGGCAGGCCGCAGGACTA 193261 29 100.0 32 ............................. GGTGAGGGCGTGGAAACCGCCGCTAATAACGT 193200 29 100.0 32 ............................. CGTGAGGCCGGGTTTATCCAGTGCGGCAGCGA 193139 29 100.0 32 ............................. CCATAATCACGCCCCCAGATATTCGGCTTGCA 193078 29 100.0 33 ............................. GTCTTTAGTCGTGCCGACATAGAACGTGTCGCA 193016 29 100.0 32 ............................. AGGCTATTCAGGATGACGATGCTGATTTTGTA 192955 29 100.0 33 ............................. CGGGACTGTCGGGCGATTCTCTCCGCAACGTGC 192893 29 100.0 32 ............................. CACAATTAAGATTTAATCACGTGCTAACAGTG 192832 29 100.0 32 ............................. GCGGCGCAAAACCTTTCAGCCGGGCGCTAAAA 192771 29 100.0 32 ............................. TTGGAAATCCAATCAGCGATGGATTCTTTAAC 192710 29 100.0 32 ............................. GACGTCAGAAAGTTTGAACAGGCGCTGGACTG 192649 29 82.8 10 ................GT.....TC...C ACAAACAGAT CA,T [192627,192630] Deletion [192611] 192607 29 100.0 32 ............................. GCGCAGATTGGGAGTTTGACCAGCGACCAGAT 192546 29 100.0 32 ............................. CCCGGCAGCTAAACCCGAACACCAATACCGAC 192485 29 100.0 32 ............................. AAAAAACAATCCAGTGCTTTATTCAATAACGC 192424 29 100.0 32 ............................. CTCACCTCTATCGCTATAGTAGAAACATTGAA 192363 29 100.0 32 ............................. GTCGCTGGGTATGGTTTATTTTGCCAGTGGCT 192302 29 100.0 32 ............................. CGATCCCGGATATTGCGGCAGGGAAAAAATTT 192241 29 100.0 33 ............................. CCGCAGCGCAAACAATCCGGTAAAAACGCACGC 192179 29 100.0 32 ............................. CGCAACCACAGCCGCTTCGCAGATATATGCGA 192118 29 100.0 33 ............................. AGGCCAGTAGACCCGCAGACAATCGCCAGCCGC 192056 29 100.0 32 ............................. AATACCGACCGCCCCGGATTTACCAGGATGAT 191995 29 100.0 32 ............................. CGCAAAGAAATTCATCCGAGCCGTAGCGCTCT 191934 29 100.0 32 ............................. TTCAAACAATTAGCCGGTGCCGTTCGCAAATT 191873 29 96.6 32 ............T................ CATCCATTAGCATTATTACAGGGATAAAATAA 191812 29 96.6 32 ............T................ AAGAATTATACTGATAACTCTTCACGTCAAAC 191751 29 96.6 32 ............T................ GATATCGCGCGGTGGGACGCGCGGCAGCGGGA 191690 29 96.6 32 ....................T........ GTATACGCCAGCGCCAGCACCGGAACCATTAC 191629 29 93.1 32 .................A..........A TGGGATAGTGTGGCGCGGCCTGATACAACGTA 191568 29 75.9 0 ..C.......AC.T...A.......C..A | ========== ====== ====== ====== ============================= ================================= ================== 43 29 98.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTCTGGCTGCCGGTGAGATTGAGCCGCCAAAGCCTGCGCCAGATATGTTGCCCCCCGCAATTCCTGAGCCTCAACCGCTGGGGGATAGTGGCTATCGGGGGCGCGGCTGATGAGTATGGTCGTTGTGGTCACAGAAAATGTACCGCCGCGTTTGCGGGGAAGGCTTGCCATCTGGTTATTGGAGATCCGGGCTGGGGTATATGTTGGTGATGTCTCTAAACGCGTGCGGGAGATGATCTGGCAGCAAATCATCCAGTTGGGTGGGATTGGAAATATCGTTATGGCCTGGGCGACAAACACGGAATCAGGTTTTGAGTTTCAAACCTGGGGGGAAAACAGACGCATGCCGGTAGATTTGGATGGGCTGAGGTTGGTTTCCTTTATTCCTGTTGAAACTCAATAAGTTGAAAGCTCTTTAATAATATGGAAATGTTGGATTAAGGTTGGTAGGTTGTTGGTTGCTGAAAATTTCTATTAAAAACAGCAAGATAAGATTAGT # Right flank : CGACTAATCTTACTCCGTATAAAAATAAACAGAAAAATGCCCAGGCACCGTTTGGGTGATGCACTTTATCAGGCTTTTTTCCCCGCTTTCGCCAGTTCCTTCACCAGTGGCAGCATAATGCGCACCACGTCCCGGCTGCGGTGTTCAATCCGCTGCGGGAGGGCCTCGTCGATATGCTGCAGATTATCCAGCCTGACGTTATGCCAGCTCGATCCCTGTGGGAAGGCTTTTGATTTTGCCCGCTGCTGATAACCGTCTTTCTTACCTAATGACCAGTTGGTGGCCTCAACATACAGCACCGGGATCCCGGCTTTATCGAAAACTTCACCGTCATTACAGCATCCGGTGCCTTTCGGGTACGCGGCGTTCCCCCCCGGGTTGGTCGCGGCAAAAATCCCGTGGGCGCGGGCAATCGCCAGCGCGCGGTCGCGGGTCAATTTACGCACCGGGGCAGGGGTGGTTTTTCCGCTGTTAAAATAGAGCTTATCGCCCACGATTAA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //