Array 1 57926-57658 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAXY01000018.1 Acinetobacter cumulans strain WCHAc060004 18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 57925 28 96.4 32 A........................... ATAAAAAGCGTCAGACTAAAAACAGCACGGCG 57865 28 100.0 32 ............................ ATATCAACTCTTAATTAATCCAAAAGGAAACA 57805 28 96.4 32 .......T.................... ATAAAAATATACAGCTCACAGGGCAAATCATT 57745 28 100.0 32 ............................ AATATCGCTATTGTCGGTGGTGTGGCCTTGCT 57685 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : ATTTAGGGTATACCCATGTTGAAATTATCAATAGCTCATTACGCTTATCTTTCAATATTCCATCGAAAAATGATCTAAAAGAAACCTTTAAAAAGATGGTCGAAAATAACTATGATTTACTTATGGAAACATCAGCTGAAATAGAGTTCGATTTAGAAAGCGAAACTATAGCAAAGATAGAAACCATCATAAAAGAAAAAGAGATTGAACTTGATGAGTTTGTCCAAAATGCGCTGATTAAATTTATCAACCAAAATGAATCGACTAAGATTGATTAACCCTTAAATGTAGATAATAAAAAGCCCAACATCCTGTTGGGCTTTTTCGTATGGGTTCGCTCGGTATAACTCCTGTCGTACCTTACAGTCCTTGTGCGTATCTATGTTCTTATTATTGTGTGGAACTTCCTGTTCCTGATGAATCCATCATAGGAAATTGCAGCTAGATCGTATATAGGCAGCTTAGAAAAGCGGAATGCGATGACGGTGTGAGATCTCAAT # Right flank : TTTAAGCTTATCAACCTTGATTTGCTGTCCAGGTTCACTGCCATACAGAAGACAAAACTGGATTTACCATTATTTAAGCTTTTCTGTTGCAGAAAGGCTTGGTACGCCCGGTCATTCATCTGGATCGTGCGGTCAGAACCATAAGTTTTGGTTCCACCAAGCACACCATTCACTAACGCTTCACGAATGTGGATTTCCCGACGTTGTAAGTCCACATTTTTCCATTGCAGACCATCGATTTCACTGGTACGCATACCCGTAAAAAAGCGAATGGTGTAATAGGGGCGGAAGTCTTCACGCACTGTGGTAAGAATTTTATGCACCTCTTCCAGAGAAAAAGGTGTGACTTCAATCTTGCTTTCCTTCAGATTGTTAATATTTTTATAAGGCGACTCAAACTCGTATCGTTCAGCCGCATCATTGAGTATCATACGTAAAGGCGTCATGATTTGATTGATCCTCGATGCTTTTAGACTTGTCTGATCTTTTCCGTGAGTCAC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 820-1629 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAXY01000014.1 Acinetobacter cumulans strain WCHAc060004 14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 820 28 100.0 32 ............................ AATCAAGAATGCCATCCATGGCAATCTCAGAA 880 28 100.0 32 ............................ TTCGGGTGGTTTTTTATTAGCTCTAACTTTAC 940 28 100.0 32 ............................ TTTCCGACTTTTAAGAATAAATTTAAATATGT 1000 28 100.0 32 ............................ AAGTGGCAGACCGTTTACCTTTGCATCGGTTA 1060 28 100.0 32 ............................ ATGCTTTAAACATAAATTTCTTAGCCCAAACC 1120 28 100.0 33 ............................ CCAAGTTTCAGCCAGTTCTTCCTGGTCAATCCA 1181 28 100.0 33 ............................ CTCAAAGGTAAACGGCTAACAGGTTCATTTGGT 1242 28 100.0 32 ............................ ATAAAAATGCATCACGTGCATTCGGTACAGCT 1302 28 100.0 32 ............................ TAAACCAATCGGCATGATCGATATACCTATTT 1362 28 100.0 32 ............................ AATGATTCACGTCACTAATTCGCGCTGTATTT 1422 28 100.0 32 ............................ ATTCAGTGTGTCATTGGCAGAACCACCTAATA 1482 28 100.0 32 ............................ TGGAGTAGCTGAAATTAAAGTAATCATGTTGT 1542 28 100.0 32 ............................ AGCACTCACTTAAACAGCTTTTGAGCTACGTT 1602 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTGGATATCCGAAAATGGCTAGAACGTTTAGAAGATTATGTACATATTACTTCTATCCGTGAAGTACCTAGCGAAATCAAAGGCTACGCAGTTTATAAACGTAAACAAGTTAAAACCAATGTACAGCGTTTGGCTCGTCACCGTGTAAAACGTGGTGATATTGGCTTTGATGAAGCACTTGCTCGATATAGCAATGTGGTGACAACAACCAACTTGCCGTATATCGAAATGAAAAGTTTAAGTACGTCTGATCAGCAAAGTGAAAAACGTTTTAAATTATTTATCGAAAAGCAATCTGCTGATAAATCTGAAAATCAGGTTTTTAGCACTTATGGATTAAGTTCCGAATCATCGGTACCCGAATTTTAACCCAATATTTTTTTACTCTTTAACAGCTTAATAAAATCAATAAGTTATGATAGTGGTTTAAACCTTGGGTCTTTTTATAGATTTAAGGGTTAAACTGCTGTTATAGCTTTATTTTTTGCTATAAAATTACT # Right flank : ATATCACAAAGGTACTACCTACAACTCCTAACCTAATTATTTACAGATAACTAAATTTTCAAACATAAAAAAGCCCTAACACGAATTAGGGCCAATTTATGCAAGCTTTGGGTTTAAGTTTTAAACCGCTTCAGCTTCTAAAATTTCAAAATCATGGGTAATTTCTACGCCACCGTCCATGAGCATTTTGCTCGCAGAACAATATTTTTCAGCAGAAAGCTCAACCGCTTTCGCCACTTGCTTTTCTTTTACACCTTTACCTGTAACTACAAAGTGCAAATGAATTTTGGTAAATACAGCAGGAATTGTGTCTGCACGTTCAGCGCTTAAGTCACAACGAACGGCTGTAATATCTTGGCGTGCTTTCTTTAAAATGGTCACAATATCAAAAGAAGCGCAACCACCAAGGCCATTCAAAATCAATTCCATTGGACGCGGACCGCGATTTTCACCGCCGTATTCTGCCGAACCATCCATGATTATGCTATGACCGCTCTGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //