Array 1 2869-1578 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVEK01000034.1 Acinetobacter bereziniae strain 507_ABAU 244_9804_128500, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2868 28 100.0 32 ............................ TATAGCTATTGCTATTCCTAAAACTGTATTCA 2808 28 100.0 32 ............................ ACTCCCCTGCTCTTATGGGCTTTTATAAATAA 2748 28 100.0 32 ............................ TGTTTCAGATTCTGAATTGGGTGAAGCAATAA 2688 28 100.0 32 ............................ AATCGGACATAACTCGTTCCAGAGAACTGAGT 2628 28 100.0 32 ............................ TTAAAAATAAGATATGAGAAAAAAGAAAGTGT 2568 28 100.0 33 ............................ AGTTCAAATTGCAAACAATCAAGTAGAATCTCA 2507 28 100.0 32 ............................ CAAGACTTCAAGAATGGGTTAAAGGTCTTTTA 2447 28 100.0 32 ............................ AAAAGGCTAAAAGCAAATGAGCGTAGATAGTA 2387 28 100.0 32 ............................ AGTGGCTCAATTGGTTGCTTTGGATTTTACAG 2327 28 100.0 33 ............................ AATTAAGCTTCTGTGGGATTGATACAGATACAA 2266 28 100.0 32 ............................ ATTGCGTACATGTGTTTGTCGCTTGATCGACA 2206 28 100.0 33 ............................ ATGTACACCCTTACAATCTCGGGTGAAAATACA 2145 28 100.0 32 ............................ AAAGACTACAAACCAAGCTGCAGACAATCACA 2085 28 100.0 32 ............................ ATAGCTGTATGAGATGTAGGTAATCTTTCCCA 2025 28 100.0 32 ............................ AAGCGTTTGCAATGTCGTTTGCCATATCCTCA 1965 28 100.0 32 ............................ TGTAGGTGCAGAATATAACCCTGCGCCTGTTC 1905 28 100.0 32 ............................ AACAACGGCAGAATTAGAGGGTACAGCTTTAT 1845 28 100.0 32 ............................ TTTTGGAGTTGTAACGTCGGGAACAATACTGC 1785 28 100.0 32 ............................ AGAAGCACAGGCAATGTATATCAAAGCGCGAG 1725 28 92.9 32 ..................C.T....... TTTCAATAAATAACAACGATCAAAACAATAAA 1665 28 100.0 32 ............................ ATTCATGGCATCGGTTGAAGTTTCAGATACAT 1605 28 96.4 0 .............G.............. | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.5 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTAGCTTAGAAACCTTACCAAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 21942-20113 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVEK01000006.1 Acinetobacter bereziniae strain 507_ABAU 43_28983_419758, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 21941 28 100.0 32 ............................ ACGAAATGCCAAGCCGATCATTGCCCAGCTGA 21881 28 100.0 32 ............................ GTAAGCCTTTGGACGAACACTGGCACCGTCAT 21821 28 100.0 32 ............................ AGTGTAATGCGTTGGAACGGATTCAAAAGGAT 21761 28 100.0 32 ............................ ATTTGTTGCTTGGTTATTGCGAGTTGCTCAAG 21701 28 100.0 32 ............................ GATATCATGACTTTTTTTAAAAAAATCTTGCG 21641 28 100.0 32 ............................ GATTTGACATGCTGTTCCCCTGAATTTAAAAA 21581 28 100.0 32 ............................ TTGAGGGTCATTCTATGAAAGCTCTTGATCAT 21521 28 100.0 32 ............................ TTAAAAATTTGATAAGAGAAAAAAGACAGTGT 21461 28 100.0 32 ............................ AGTCTCTACATTTAACAAACGTCAATTAAAAC 21401 28 100.0 32 ............................ AGACTTAGAAAAATCGGGGGTGGCTGTCTTAG 21341 28 100.0 32 ............................ TTGTAGCTCCAAAACTGTTCGTTTCATGACAA 21281 28 100.0 32 ............................ TTTATAAAGTGATTTTGGTTCTGCTGGCTGAT 21221 28 100.0 33 ............................ AACCCAAGTAAGTGCAGAAGGACCAAGTTTTAC 21160 28 100.0 32 ............................ ATTCAACGATCAACAAAAGTTGCATGGATTCG 21100 28 100.0 32 ............................ TGAATGTAATATGTATACATGTTCAAAGCAGG 21040 28 100.0 32 ............................ ATTTTCTGGTCGGGAAAACGGCATTTTAATAA 20980 28 100.0 32 ............................ AATCTAATCAGAATTTGATTCAAGAATGAAAC 20920 28 100.0 32 ............................ TTTCTCAAATCTTGTTCTGCTCTGCTCAATCG 20860 28 100.0 32 ............................ TTCATCCGTGCATATGTCTGAGGGGCTTCACC 20800 28 100.0 32 ............................ AACACCTAAATCTATTTGCTCTGGGTCTAATT 20740 28 100.0 32 ............................ AAAACTTGCAGTTGCACATCTGCTTTAGCCGC 20680 28 100.0 32 ............................ AATAATATGACTGAGTAATTGAAGCGGATATG 20620 28 100.0 32 ............................ TTGTTATAATAATAAGCAACGTAAAAGCCCAT 20560 28 100.0 32 ............................ ATTTTCAAAATTTAATGTCGCCGTTTTGGTCG 20500 28 100.0 32 ............................ TTGTACAGCTTGTGATTCATCACTATTTCCAC 20440 28 100.0 32 ............................ AGTATGATTTTGAACACCTTGTTCTGATAATT 20380 28 78.6 32 .C...C.G...T.....C.......G.. TATACGTCATGATATTGAGCAAATATTACTCA 20320 28 92.9 32 .....C...................C.. TTGCAAAAGCAGCTTTGGCTAGTGCAATGGAA 20260 28 85.7 32 .....C.G..A......C.......... ATATTATTTTTAGGGGAATAACAATGAATGAA 20200 28 89.3 32 .....C.....T............A... ACTACGAGCTGATAAGGGGATAGACATATCAC 20140 28 75.0 0 .....C.....T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 31 28 97.5 32 GTTCATTACCGCATAGGTAGCTTAGAAA # Left flank : TCAAAGTGGCTAGAAAGATTGGTAGACTATGTTCATATCACTCAACCACGAGAAGTTCCAAAAACAAAAATCACTGGATATGCCCATTATTTCCGAATTAATCCAAAAATGACTTTGGAGGAACGTATTGCTCATCAGGCTCAACGACGAAGCATTTCTTTTGATGAAGCTCAACAACATTTTAAGCAATATAGTGAACAACCTGAAATTGTTCCCTATGTCAGTTTAAAAAGTTTAAGTACTAAACGTGAACAAAATATAGATCGATATTATCGGTTATATATTGGGAAATCTGTTGCTGAAGAAGCAAATGATGGAAAATTTGGAACATATGGTCTCAGTAGAACAGCAACAGTCCCCGAATTTTAACCCAATATTTTTCCACTCTTTAACAACTTAATAAAATCAATAAGTTATAACAGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTAATCTAAAATTATA # Right flank : TATAAACGCCTTAACATCTTAGCTAAATTTAGGAAAGTACAAACATATGGAATAATTTTTACAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAATACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACAC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1925-154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVEK01000068.1 Acinetobacter bereziniae strain 507_ABAU 447_46632_701208, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1924 28 100.0 32 ............................ AATCAACTGCAACAAGTAGAACCTCAACCAAC 1864 28 100.0 32 ............................ TTTTTTACATCAGTTCGCGCCTACGGACGCTC 1804 28 100.0 32 ............................ GTTGTATGGTCATTTACGACTGATTTACAGCC 1744 28 100.0 32 ............................ AGTACCGTGTGAATGCGAGTTTGAATTCTTTA 1684 28 100.0 32 ............................ TTTAGTTAAAAATAATTTAGATGAATTTTGAG 1624 28 100.0 33 ............................ TTTTTAAAAGGTTAAGATGTACGAAATTAACTT 1563 28 100.0 32 ............................ TTTATTCATTCCGTTCTCAGGTGTGAATTCGC 1503 28 100.0 32 ............................ ATCCAGCTCGATGTCGATTACAAATGTCGTGA 1443 28 100.0 32 ............................ GAAACATGAAACGTGGGTATAACAATGAAACC 1383 28 100.0 33 ............................ TCTTAATTAATACGGCTTAATAAAATTTCCCAA 1322 28 96.4 32 ........T................... GCAGCGTGGACAGATGTCGGGGGTCAGTCTCC 1262 28 100.0 32 ............................ AACCAATGAAAACCCCGAGACAAATAGCAACG 1202 28 100.0 32 ............................ ACAGTATGGTTGAACTCGTTGGCTACGGTGAA 1142 28 100.0 32 ............................ GCTTGAAATCATCACCTCGCGAACGTTATCCG 1082 28 100.0 32 ............................ AACCCCGATTAAACGCCCCCATTCGATTAACG 1022 28 100.0 32 ............................ GTGACGGGTTAGAATCTTCGGTCTATCTGAGT 962 28 100.0 32 ............................ GCCCTGAGATCGTAAAGTTAAACTAATATCCT 902 28 100.0 32 ............................ TTAGCTGTATTGGACCAGTTAATTCCTGTTTG 842 28 100.0 32 ............................ TGAAGGGTTTGTTTTTGTGCCGAAAGAATTGA 782 28 100.0 32 ............................ TCAACGCACCCATGCGGTGTGGTACGGTCGAC 722 28 100.0 33 ............................ TGTTTGTGTTCCAGTGTCAGGGTCAGTTTTATT 661 28 100.0 32 ............................ GACAGTCCAGTTAATAAGACGAATATCAGACA 601 28 100.0 32 ............................ ATTGTGCGGGGGTGGACCTTGTACTTAATTGA 541 28 100.0 32 ............................ TTGAACGGTATAGATCGCAATAAATCCAGATT 481 28 100.0 32 ............................ TTGCCAGTCCCAACGAATTAGATAATTCCAAT 421 28 100.0 32 ............................ TCAACAGGTAGGCTAGAGATCGTTGCACTATC 361 28 100.0 32 ............................ TACAACCAAGCATGTCGCTATCACATTGGCAA 301 28 100.0 32 ............................ TGGAGCATGAGCCGAGAGAAATTGACACAGAA 241 28 100.0 32 ............................ TATAGTATATAAAAAATTCTATTACCCCAAAT 181 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.8 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCTAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTGGTATAAATTGTTTATTTTATAGCAATAAAAAAGCCCACTTGAATCAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //