Array 1 6854-8935 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZQO010000001.1 Streptococcus cristatus strain CR163 Scristatus_CR163_NinaOddballs_Sia_NO_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 6854 36 100.0 30 .................................... TGGCTTTTTGTATGAAAAAGCAGAAGAGGG 6920 36 100.0 31 .................................... CGGGGATAAAGTTTTAATCCCCGCCCCTTTA 6987 36 100.0 30 .................................... GCTACAGGTAGGTTTTGCTTTGAGACTGAT 7053 36 100.0 30 .................................... CTTCTGGTTAATCTTTATCAAGAACATGTT 7119 36 100.0 30 .................................... ATTTTTACTTGATTTTTCCATGAGTTGTCA 7185 36 100.0 30 .................................... ATTATCAAACACTGTTATTTGATTATGATT 7251 36 100.0 30 .................................... TATCCAAGGTAGGACTAACACTAGTACCAA 7317 36 100.0 30 .................................... TAGCTATGCTATTTACTGCTATCACCCAAA 7383 36 100.0 30 .................................... TATCCAAGGTAGGACTAACACCAGTACGAA 7449 36 100.0 30 .................................... AGCCGTAGTAGATTCAATTGTGGAACGTCT 7515 36 100.0 30 .................................... TGATGTTAGACAAGAAATATTCTGGAATAG 7581 36 100.0 30 .................................... AAATAGAATGTACTTATTTTATCAATGACT 7647 36 100.0 30 .................................... ATTCTTACCAACAATTCAGGGTTATTTATA 7713 36 100.0 30 .................................... TCCTTCTCGCTCCGTAAATTATAATCCTGT 7779 36 100.0 30 .................................... TTTTTCATCGTGGAGTTTATCTAGTAAGTA 7845 36 100.0 30 .................................... AGACGGATTTGCTTTCGTAGGTGTAGAAGT 7911 36 100.0 30 .................................... ATGGTCAAGAAGTTCAAGCTGATTATATTC 7977 36 100.0 30 .................................... TTCAAGCTCTTAAAGACGAACGAGCTAAAG 8043 36 100.0 30 .................................... ATCTTGAAATAGATCTCTGCGTTTGCTGTC 8109 36 100.0 30 .................................... CTTACCTCCCGTTGATTTACCAGACAAGTC 8175 36 100.0 30 .................................... AATGATAGTAAAATATTATCCTATGAAAAA 8241 36 100.0 30 .................................... TATGCTACGTCAAGGATATGCTGTAGCAAT 8307 36 100.0 30 .................................... TTTCCGTTATAATGTGTTATAATGTATAGT 8373 36 100.0 30 .................................... CGCTGTACGCTCTTTACAAGGACAGACTAT 8439 36 100.0 31 .................................... ATCAGCGATTACAATGTCGAAGTCATTATAA 8506 36 100.0 30 .................................... GTAATAGATGGCTAAAATTGGATTAGAATT 8572 36 100.0 30 .................................... TGAATTTGAAGCTTGGTGATGTAGTTGAAT 8638 36 100.0 30 .................................... TTTTTAAAGATTACGGGAATCAGACTGACA 8704 36 100.0 29 .................................... CTAAATTCTGAATAGTTTCTATATTAGTT 8769 36 100.0 30 .................................... TTTTTGTTTCGTTGACTCACTTTTATTACT 8835 36 97.2 29 ...........A........................ GATGGTAAAATCACATCTGATAACCTACA 8900 36 94.4 0 ..............C....................T | ========== ====== ====== ====== ==================================== =============================== ================== 32 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : GTCAACTCAATGACAAACCGGAAGTCAAGTCCATGATTGAAAAGTTGGTAGCTACGATTACAGAATTACTGGCATTTGAGTGTTTGGAAAACGAATTGGACTTGGAATACGATGAAATCACCATTCTAGAGTTGATCGATGCGCTAGGGGTCAAAGTTGAAACTCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTATCCAGGTTTTCAAATATCTTTCCAAAAAGAAACTCCTTGTCTTCATCAATGCGATCGCCTATCTATCAAAGGATGAATTAGTAAATATGATAGAGTATATCCAACTCAATCAACTAAGGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGCTGGATCAAGACTATTTCTTGAATCCTGAAAATATGATATAATAAGAGTAACAATTGGAATCGGACGAGCTGAAGTCTGGCTGAGACGAATGGCGCGATTACGAAATTTCGTAAGAAAAAATTTTCTACGAG # Right flank : TCGCTCCAAAGAGCCCTACATAGTCCAATAAATCCGATTCTTGAAAGGAGAGTCGGACTTTAATTTTATTCGACTTCGATTTTTGTGCTATAAATTTTTTGCAATATCTGCTTGTATTTTTTTAAAATTCTGCTATTATGGTATAATATTTATTTAGGAGGAAGAGAATGAGCTATATTTTGGAGATTTTACCTAGTCTTCTAAGTGGAGCAGCAACTACCTTGCAAGTGTTTGCTTTGGTCTTGGTTTTTTTCGATTCCTTTGGGAATTATGCTGGCTTTTTCGATGCAAATTCGCTTGAAGCCCCTGCAATGGCTGCTTCATATTTACATTTGGATTATGCGTGGGACGCCGCTTTTATTGCAGTTAATCTTTATTTACTATGTTTTGCCAAGTATCGGAATTCGACTGGATCGGATTCCGGCAGTGATTATTGCCTTTACACTAAACTATGCCGCTTATTTTGCGGAGATCTTCCGCGGCGGCATTTCTTCCATTCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //