Array 1 1592-543 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORXY01000169.1 Xanthomonas fragariae strain CFBP 2510 isolate CFBP 2510, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1591 28 100.0 32 ............................ TTCGCGGGCTAACGTCGGCATAGCAGCAATGA 1531 28 100.0 32 ............................ AAGGCGTCACGCCCGGAACGCTGATGCCGTTG 1471 28 100.0 32 ............................ ACGATGCTGCCGCTGGTGCCGAACACGTAGGC 1411 28 100.0 32 ............................ AGGAAGATCGCCAGGAGGACCAGGACGGTGAC 1351 28 100.0 32 ............................ GTCCTCATCTACACCACGCATCCCTACATCGT 1291 28 100.0 32 ............................ ATGAGCGGCACCGCTCAGATAGGCAATAACAC 1231 28 100.0 32 ............................ GTTGCCGGGTTGCCCGGTGTATAGCTCGATTG 1171 28 100.0 32 ............................ ATCACGGTCAGTACGGCACCGCCGATCGCTGC 1111 28 100.0 32 ............................ ACAAAGCGCGATGCACCGCGCTGGGAATCTCC 1051 28 100.0 32 ............................ AATCACGGTGTGGTAGGTGTCGATGTGGGAAA 991 28 100.0 33 ............................ ATGGTCATTGCGATCAACCTGTTTACGTTCTTC 930 28 100.0 32 ............................ GAAGACGGCAGTGTCATGCAGTTGCAGCAGAT 870 28 100.0 32 ............................ CTTGTATTGGGCTGTGTCTACTTGAATTGAAG 810 28 100.0 32 ............................ AGTACCAGGGCAACGTCCAGTGCGCATGCAAT 750 28 100.0 32 ............................ GCTAGCGCACTGACCATCACCAGGGAGACAGG 690 28 100.0 32 ............................ ACCACAATGTTAGAGGTATCGATCCACTGCAC 630 28 100.0 32 ............................ ATTGCGTCATGATCACAGCATCGCCGCCATTC 570 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGTCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACACCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGCCAGGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //