Array 1 445908-446058 **** Predicted by CRISPRDetect 2.4 *** >NZ_QIYH01000001.1 Klebsiella variicola strain WUSM_KV_15 NODE_1_length_855523_cov_22.6678, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 445908 29 100.0 32 ............................. TGCAGCGGGACATCATTTAGCGTGATGACATC 445969 29 86.2 32 ......................T.TG..T AAAAAAGAAAAACTCTCCGGTTCCCTGTTCGG 446030 29 75.9 0 ............C.T......CCT...TT | ========== ====== ====== ====== ============================= ================================ ================== 3 29 87.4 32 GTCTTCCCCACATGCGTGGGGGGGGTTCC # Left flank : TCAGCGTTGGCCAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTCGACGGCGCAGCGCAGGATAATAGCCTCCAGCTCCCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGAAGTAACTACGCGAAGCCACGGAAGGCAAGCATCAGTACGTCGCGCTACGTTCTGGGTATGACAAAAGCGTTTTGCGCCTGGCTGCGGGGCGGGCAGGCCAGTAAGGTATATCGGTCCTGGTCAGCAGCAAGTCGACGGTGGTGATATGGGGACATACTTTTTCGTTTGATAAATGTTGATGCTGATGCGGAAACCCTGCGGAGCGCAACTATCGTAAATCTGGTATTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGTTTGATAAGGAAATTAAAATGAAAAGAGCCGAATTAGACGTTGTGGTTTTAGGTGAGGATTTGCCGAATGAAGGGCTGGTAAAAGGAACGCTTGGTACGATTGTGATGGTTTTTAATGCGCCAACAACTGGCTATCTGGTCGAGTTTTGCGACGAGAAAGGAAAAACAATCGCAATGCCAGTTTTATTCCCCGCCCAGCTAAAGCGCTATTTCACGATTGGTAACCTGAAGTCGCTGATGGTGGAAGGTAATTATCCCGTAGCCGACCCTGTAGACCCAGATGTCATGGCAGATTTAATGCACAAAGTCGCGCCTGTTGAATGGGAGGACAAGAAAAGAAGGGTCTATGAGGATATTCAACGACTGTTGATTAGTCGGCCGGACTACGCGGATATGTTCAATATTATGGATGGGGGTGAGTACAATGGCATGACATTGTACAGCCTGGTGCAGGCAGAGAACGGTGAACCTGCATGGTCGAATATCTTTGTTCGAAA # Questionable array : NO Score: 3.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.37, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGGGGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 70749-73096 **** Predicted by CRISPRDetect 2.4 *** >NZ_QIYH01000011.1 Klebsiella variicola strain WUSM_KV_15 NODE_11_length_170073_cov_24.9946, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 70749 29 100.0 32 ............................. GGCGCAAGGGCGGCAGCAGCAACGCGAGCACG 70810 29 100.0 32 ............................. ATCCACCGTGACCACGCCATCCTGGTGCAGCG 70871 29 100.0 32 ............................. GTATTCGAGAAAATCCCCGCACCAGGTCCGGA 70932 29 100.0 32 ............................. GATTGGAGGATCTGCGGGAAAAATTGCGTGGT 70993 29 100.0 32 ............................. GTTTCAAACCAGACTGCTGCAGGTTTTCAATG 71054 29 100.0 32 ............................. GGTGATTTGTCACAGTGAAAGGGCGGATTGTC 71115 29 100.0 32 ............................. CGATACACACCGTACCGCCCACCCCAGGGGTT 71176 29 100.0 32 ............................. GTAAAAGTTAGCCCTTTGTTCAGGGTGACTTC 71237 29 100.0 32 ............................. CGTCCAATCGACGTCCTGCCGCTTTTCAGCTG 71298 29 100.0 32 ............................. GCCGCAAATATACTTACGACCCGGTCAGCGAA 71359 29 100.0 32 ............................. ATGCCGGCAACGAAAATCCACGCAATACCACT 71420 29 100.0 32 ............................. GCTTCGCGGTAGCGTAGCAGCGTTGCACTGTC 71481 29 100.0 32 ............................. TGGCGGCGCAGCTTGCCGCGCTGGATATACAC 71542 29 100.0 32 ............................. TGATATCGTCGGCTCCGGCATCGCCCAAGGTC 71603 29 100.0 32 ............................. TCAATCTTCCCGCCGTTCTTCAGCAGCAGGCG 71664 29 100.0 32 ............................. CTGTAGTCGTTCTGATAATGTTTTCATGCTGT 71725 29 100.0 32 ............................. TTGACGCTGGATTTCATTCCAGTGCAGGGAGG 71786 29 100.0 32 ............................. GTATTGAAACCCCCGCCACCGATCGCATCGTA 71847 29 100.0 32 ............................. CGCGAGCAGAAGGCATTATTGACGGAGGCTGT 71908 29 100.0 32 ............................. CTGGTCGACAGCCAGGCGGTTAAATTCCTGAA 71969 29 100.0 32 ............................. CAATACCCCTTCGCGAATTTAGGACCGTGGAA 72030 29 100.0 32 ............................. CTGACGGTTGATAAGCTGGACGGTAAACAAAC 72091 29 100.0 32 ............................. CCAGCACCCAAACCGGCCAGCGGTGTGGCCGC 72152 29 100.0 32 ............................. GCGATGGGCACTAACCCGTGGTTTGATGGCAC 72213 29 100.0 32 ............................. CGATCATGCCGCTGACGCGGGCCGCAAACGGC 72274 29 100.0 32 ............................. CGCGCCGCCGGTGCGTCGGGTTACGCGCAGGT 72335 29 100.0 33 ............................. GTTCGACTTCGTCGCGAAAATTATAATAAAGGC 72397 29 100.0 32 ............................. GCTCGACGGTTAATGCCGATAACATGGATTTT 72458 29 100.0 32 ............................. GCGAATGCCTGGCGTTCCCAGTGTTTTTTACG 72519 29 100.0 32 ............................. CCAAACGGCTGGGTATAAAGATGGGAACCCCC 72580 29 100.0 32 ............................. GCAATTTCAATAAGACAGCCGTGGGCCTGGCT 72641 29 100.0 32 ............................. CTGTACTAGGCCAGACGATGACAACGGATGAC 72702 29 96.6 32 .........G................... ACCGGCGGACGCAAAGAGGGAAGTGCCGGTAT 72763 29 96.6 32 .........G................... AACACCCTCACTGAAATGGTTCGCCTCGCGGT 72824 29 93.1 32 .........G..T................ TGATTTTCAAGTTCCCGCCGGTCACTGTGACA 72885 29 96.6 32 .........G................... ATCCCGTCTGCCCATTTGGAGATTGAAGGTTC 72946 29 93.1 32 .........G.A................. TTCGCGATATCCGCCTGCGCCGCCGCCAGAGT 73007 29 96.6 32 .........G................... TCGAGGCGAAAATTTACGCCGGGCGTTTTCAT 73068 28 79.3 0 .........G.TT..-.........G..C | A [73079] ========== ====== ====== ====== ============================= ================================= ================== 39 29 98.8 32 GTGTTCCCCACGCCAGCGGGGATAAACCG # Left flank : GTGTTGTCGGCAGGCGAAATTGAGCCGCCTCAACCACCGCCGGATATGCTGCCGCCTGCGATACCCGAACCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTAACGGAAAATGTTCCACCTCGCCTGCGAGGACGTCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGCGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTCAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACGAACAGCGAATCAGGTTTTGAGTTTCAAACTTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCTTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGGAATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTTTTATAAAATAGTAACATATCTTTAGT # Right flank : CGCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGATTTTTTGTGTCCTTTTGTCGGCAAGGTATTGATAAACGCCTGGGCGGTGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGACCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCACGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCAGCGTGAATACGGCAGACCGGCGTCACAAATTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //