Array 1 6958-8363 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB898587.1 Prevotella oris DSM 18711 = JCM 12252 strain DSM 18711 D468DRAFT_scaffold00011.11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 6958 30 100.0 37 .............................. TGGGAATAGGTTTCAATGCTGCAAGTGTGAAAGCTGC 7025 30 100.0 37 .............................. CCCTCAACTTTCTTCAATCGCTCATTCAAATCATTGC 7092 30 100.0 34 .............................. TGATGTTCTGCGGGTACAGATTATCTGCACCGTA 7156 30 100.0 34 .............................. GGCAAACGATGCAGCCCGGGCCGCCTATGCCGAT 7220 30 100.0 35 .............................. TTGTTCCAGGGCGCTTGCATTCAACATACCTCCAG 7285 30 100.0 37 .............................. CTGTCTTTATTATTAACATTAAAAGTTCCAACTAATC 7352 30 100.0 34 .............................. ACGTTCGGAACAGAACCTTGAAACACCTTTATCG 7416 30 100.0 34 .............................. GAACCAATCTAACATACACATATAATGAGAGGGG 7480 30 100.0 34 .............................. TTAGAAAGCACAGGGTTCAACTTCTCAAACAATT 7544 30 100.0 34 .............................. ACAGGAGACGCAGTCTTATTAGCTTCAATTTGAG 7608 30 100.0 34 .............................. ACTTGTATTTCGCGCGTCGACATAGCCGATGATA 7672 30 100.0 36 .............................. GTAGAAGGAGTGAAGCATAGTGCAAACCGCTTGACA 7738 30 100.0 36 .............................. TTGCTATTTTTTCAAATTTAGAGGGAATTGTTGACC 7804 30 100.0 36 .............................. GACAGAGTTCAAAAAGGAAGAAGGCACTCAAACAGC 7870 30 100.0 34 .............................. GCAGAAGTACATTGCAAATTTGGCTGCAGCACAG 7934 30 100.0 36 .............................. AGGAATTGCTGCTTCCCTGTCGATGAACAATCTCTA 8000 30 100.0 35 .............................. AGGCGTTGATATATTCGGCCTTGTCCTCCTTCAAT 8065 30 100.0 35 .............................. AAGACAAGCTGTTGCATCCGAGCCGGAAAATCAAA 8130 30 100.0 40 .............................. TGATACAGGCTCATGCAGTTGTAACCTCCCTCCGGCTCAA 8200 30 100.0 40 .............................. AATTCAGTAAATTAGTCAATACTAATCCATTACGATAAAA 8270 30 100.0 34 .............................. GAAATGGAAGCGGTGCTGAAAGATATTGTTTCTT 8334 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 22 30 100.0 36 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : CTTTTAAGATGTATTGGTAATTGTATGTATGTTATCCTGATTTATGATGTGGCAGAGAAGCGTGTTAGTAAAATGCTGAAATTATGTCGGCAATATCTTTGTTGGATACAGAATTCTGTGTTTGAAGGCGAACTGTCAGAAGTTAAACTGCGGGAGTTGCAGTATAAGATAGGAAACTTAATTGATAAAAAAGAGGATAGTGTGATAATATTCTCTAATAAAAAGGGTTATCATATGAGTAAGGATATTCTTGGCAAGGAGCGAATGTCAACAGAGAACTTTCTGTAAAGTTGTCGATGTGTAGGAATAGGTGTCCTTTTCATTTTCCCGTAGATGCCCATATCGCTCTTTGACTTCTTGAAACACCTTATATAAAAGGGAATGTCGATGCTCTATGGAAAATATATCATTGGGCATCGACATTTTTTCAATGATTTTTATTACCTTTGTATTGCTGAAAACATTAGTGTTTATTCGACTTATCTCTTTTAAAAGAGTGG # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCAACATAACCTTGTTATAATTGAACCTTATTGGAATTGAAATTTCTTTGTACTGTTGGTTATCGGATATGCCATCAGTTATAATTGAACCTTATTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 8778-9195 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB898587.1 Prevotella oris DSM 18711 = JCM 12252 strain DSM 18711 D468DRAFT_scaffold00011.11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 8778 29 100.0 35 ............................. TTTCTTTGTACTGTTGGTTATCGGATATGCCATCA 8842 29 100.0 37 ............................. TTTGAGCGAATTAGCGAGCTTGCGAAGCGTCCTATAA 8908 29 100.0 37 ............................. TGTGATGAGATTGAACGTATACTAACAACAATAAAAA 8974 29 100.0 35 ............................. CACAAATGAGATGAAAGGGAAGGAATTACGCATAG 9038 29 96.6 35 ............T................ TGAAGATGTATCCCGGCATGACACGCTGGCAAGTA 9102 29 96.6 36 ...................A......... CCGCAGATTGGTTCAAGTAGTGATTACGCGAACGAT 9167 29 72.4 0 .....T........GC..C...T..T.GG | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 95.1 36 GTTATAATTGAACCTTATTGGAATTGAAA # Left flank : TGAACCTTATTGGAATTGAAATGAAATGGAAGCGGTGCTGAAAGATATTGTTTCTTGTTATAATTGAACCTTATTGGAATTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCAACATAACCTT # Right flank : GCGTAATAGACATTCGGGAGGTTATTTACCTGCCAAACATCTATTACGCCAGCCGGTTTATTCCCAATATTCCTTATCAGTCTTGATGTCAAGCCAACCGGGAATGCCATTTTTGGTGATGTGATAAAAAGAACGGGTGGTTTGTTTTATCTCGTCATAGACGGGGGCTTTGTCACGGGGGAAGATCCCTACTTTATTATCTTTGTAGAAATAAATCAGACCATCGGACTGCATGATGATAGAGTCGTTGTCTATTGGAAAGATTATTTTTCCCGTGACTTTAACGGTTGGGTAAATCTCTGTTTTCTCATCCCAATCATATACACGTTTGGTTATTAACTTCGGTTTCACATTCTTCGGCTGCTTATATTCATAGGCCACGATGCCGAATTTCCCGTTTCTGCCTACTCTTATCCATTCTGGGTGCATGTCAATCTCACCGATAATCCAGCTGTTTCCAGTGCGGTGGTATGATTTCTGGCCATCAAGGAATGCCACAG # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [15.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //