Array 1 41713-40353 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDJZ01000014.1 Arcobacter cloacae strain F26 NODE_14_length_56630_cov_103.563_ID_1566, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 41712 36 100.0 30 .................................... ATAACCATTGATATATCCTAAAACGGATAA 41646 36 100.0 30 .................................... CCTCTAATTGATTAGAATATTTTTTAATTT 41580 36 100.0 29 .................................... TACCATTTCCTCATTATCATTATTTTAAG 41515 36 100.0 30 .................................... AATGGGAGTGTTTTCCCTCCACTTAAACAG 41449 36 100.0 29 .................................... TTAATAGTTGATGAGCCTATAGTTGGCTT 41384 36 100.0 30 .................................... CATATCCTCTTTAGGTACTTCTTCAATTTG 41318 36 100.0 30 .................................... TTACAAGGTAAATCATGAGAACGACAACGA 41252 36 100.0 30 .................................... TTACTTCACCAGTAAAATCATAATTGTCAT 41186 36 100.0 30 .................................... AATTAAGAGTATCTATTCTTAATGTATCAA 41120 36 100.0 31 .................................... TTGTTTGTAAACCATAAGGCAATCTTTGTGC 41053 36 100.0 31 .................................... TCAGCAACCGCTGTATAGCCAGCAATGCTTT 40986 36 100.0 29 .................................... CACTAAAGAGCCAATTAGAGAAGTTACAG 40921 36 100.0 30 .................................... AACCTGATTTGATATATGGAAGGTTAGACA 40855 36 100.0 30 .................................... ATACGATATATGAAATTGGATTTTATGAAA 40789 36 100.0 30 .................................... GTATCAATACCAAATAGCGATAGTGGGTGT 40723 36 100.0 29 .................................... CTTCTTTAGTTGGGTTAGCTTTTGACTTA 40658 36 100.0 30 .................................... AGAACTTTAGTTGTTAAAATGGCTGGGATT 40592 36 100.0 31 .................................... TAGGCAATTTCTTTGAGTATTTAAGAAGTAA 40525 36 100.0 31 .................................... TAAAGCTACTACACAATCCTTATCAAACATA 40458 36 100.0 30 .................................... ACTTATAATCATTAACAGTAGACAATTCAG 40392 36 91.7 0 ...............A.......T...........A | T,TA,A [40356,40362,40366] ========== ====== ====== ====== ==================================== =============================== ================== 21 36 99.6 30 ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Left flank : GATGGCAAAAATGTAACAGTTTCCAACGCTATGAAATCAATAGTGGCAAATTATCAATCAATTTGCCTATCTAAATGTGAAGATTTGACTCTTTTTGAATTATGAAAAAAACAGAAGAAACAAGTAGGTACAGAAAAATGGTTTTATTTACAATGTTTGATATGCCCACAAATACAAAAAAAGATATAAAAAAATATACAAAATTTCGCAAAAAACTTCTTGAAATGGGTTTTATAATGTTTCAATACTCAGTTTATATAAGATTTTGTAAAAGTTTAGCATTTGCCCAAAAATATGAAGCCAAAATTCAACAATCAGCACCCACAGGTGGTTCAATAAGAGTTATGAAAATCACAGAAGCACAATATAAAAATATGTTAGTTATAGAAAACTATCGAGAAAAACCTGAAAAAAAAGTACAAAAACAAACACAAACGGTGCTTGTTTTTTAGTATAAAAAACCTTGAAAATACTATGAAATAAGGGTTTTAAGCTACTCT # Right flank : AAATCAATCTTAGGGCTAATCAAAGTAAATAAATTCTACTTTTGTATAATTTAAAATTAACTATCAATTAAATTAGTATTAAATTACACAAAAGTATAATTTTAAAGTTATAATTAATACAATAAGAAATAAAATATACAAAAGTATAATTATAAATATAAAATCTATTTTCTAGGATTTATAATGGCAAAAAAGGTAAAAGAATCTACTATTCCTGATAGTAATATCATTACAGATATTAAAGATTTTGGAAAACACTTAAAATATAAAAGAACTAGTCAAGGTTTGACTTTAGTTGAAGCAGCACAACTTTGTAATATTAATACTACAACTTTAATTAGGCTAGAAAAAGGCTCTGAAGGTGTTAGATTATCAACAGCTTTATATGTGGCAAAAATGTTTGGTTTAAAGCTAATATTGGAATAATAAATGATGCAACTACATATATTTTATGACAAGATTGAAGTTGGAATTTTAAAGTATGAACCAATAGAAGATAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //