Array 1 21249-21416 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQS010000032.1 Anabaena sp. FACHB-1391 contig32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================== ================== 21249 24 95.8 46 ....................T... TGTAGGGGCGAACGGCCGTTCGCCCTTACGTGGGTTTGATCATCAG 21319 24 100.0 50 ........................ GCGAGTGGGGACTCGATTAGTCATGTGGATCAAATTGTAGAGGTTTTAAT 21393 24 95.8 0 .................G...... | ========== ====== ====== ====== ======================== ================================================== ================== 3 24 97.2 48 GTTTCCATTCAATTAATATCCCCA # Left flank : CATGATCTGCTAAGAGGATATTTGCTAATGCTTTACCACGAGAATCATCGGGGGTTTTGCCAATTTCAACCCAAGCTTTCATTACCTCTAGTTGTTTATAGAAGCTATTTTTACCCCGTCCTGTATTGTCATGTAATGCCTTTAATACAGGGTCATGTAGTAACCCCCAAATCTTAGCCCGCCAATATTCTGCTGTCATCGGTAGATCCCCTGTTTAGCTTATAGATGAATTATAAGAGCGCGATTCAGTGTTTGTCTAGGAATCTAAAATATCTCAAGATTTTTGTAATATTTGCTCTAACCCTTACTCTGTACGCTTTTCCTGATTTTGAGGATTTTATTAAAAATATTTTATTTTCTTTGACATTGGTTCTTATTTATGCTGCTATCAAGTTACAGCGTTTCCTTTACCAAACATTGATTGATAGTTAAAATGTACTGATTCTCAAAATATCAGTACATATTTTATTATGTATTTATATATACTGCTGATGGGCGTT # Right flank : AGCGAGTGGGGACTAAAACACCCGCTCATGAAACACATCCTTTCGGAATACGCGGGAGTTTACTTTGAAAATCTTCATTACCTTCTATACTCAAAACCTTAAAAGAAGGCAATCCATAAACGGCGTGCGACAGGTCTAGATTATTCGGGGAATAAGAATGCCCCTGATATCCAATCGAAACCTCAATCTCTCTGTTCCAAGCCCTTAAAGCCATCTCTTCTATGTCTTTTCTGGCACTTGCTTTTTCTGCGGCGGCTTTCAGCTTGTTTTTTTGGTTGCTTGCTGTTGGGTAACTTTGAACTTTTACAACAGGATTAATGAACTCAAAAAGATCATTATGTTCCGTCTCAACTTCAACGCTTGCCAAAGTTATTTCTTTGTTGCCTATGTCACCAAATGGACAGTATTCAAGTTTGATTTTCATGTAAAATCGCTCCTAAAACAAAATTAAAATGCTCTGGATGTTGCTTGTAAAAGTCAGTCATCAGTTTGGGATCGCG # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.19, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATATCCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 24068-21927 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQS010000032.1 Anabaena sp. FACHB-1391 contig32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 24067 36 100.0 43 .................................... TAGAACTGGTATTACTGGACAAGATGCTAAAGCGTGGCTTGCA 23988 36 100.0 38 .................................... AAAGATCCATTAAGGATTTTATTCAATTTCTTTTGGAT 23914 36 100.0 35 .................................... CATCCCACTGAGATCCTTTTAATCCTTTTCTTTGA 23843 36 100.0 35 .................................... TGATACTACGTATCTAAATGCCCACAAGAAAAATT 23772 36 100.0 37 .................................... TTTAGGGAATTACCCACTGGTTTCAGCAAGAAGTGGT 23699 36 100.0 45 .................................... ATAATATTAGTTATTCTTTTACCAACAAGTCCTTTTTTACTCTAC 23618 36 100.0 37 .................................... AGCTTGAGGTGGTGGTATAGACAAATTACGTAATTAA 23545 36 100.0 41 .................................... GCGGCTTTCCGGCCACTTCTCTTCTTTTAGCTGTTCTTCCA 23468 36 100.0 46 .................................... TGTTAGAAGGCTCTACCAAAGTGTAGGGAGAAAGAGCAAGAAAAAA 23386 36 100.0 36 .................................... TTCTTAAGAACTCCAACTGCGTTAAGATGTCATCTT 23314 36 100.0 36 .................................... TTGTCAGGGGTTTTTTACTTCCATCAAATTCATTCA 23242 36 100.0 41 .................................... GTAAGCAGTTGTATAGTGGTTATTGTAAGTTTTTTGAGAAT 23165 36 100.0 37 .................................... CCATAGAAGAAAGATCAGGAGTAATCCGGTACTTCTA 23092 36 100.0 38 .................................... ACTAGTAAATATTTTTACCTCACCAAATGTTCCATGGT 23018 36 100.0 35 .................................... TAAAGTTGTCATAAGTTTTGTTTCTCTTGTTTCCT 22947 36 100.0 39 .................................... CCGCATTTTTGGAGATTAGAGAGGGTGCAATGAACGAAG 22872 36 100.0 38 .................................... TTTAAAGACCTTATCGCTAGAGGGTGTCCACTTAAAGG 22798 36 100.0 42 .................................... TTAACGAAAGTTCTTCTGGCAAAGGTTGCAGTTCATAATCAC 22720 36 100.0 40 .................................... TTTAAAAAATGCACAAATTACTTACACCAACCCTAATGCC 22644 36 100.0 37 .................................... ATTATATAAAGACCTGAAAGATAATCAAAAGTTAGGG 22571 36 100.0 38 .................................... AAAATGATACAGCTACCGAGAATTAACATACTTAATAA 22497 36 100.0 42 .................................... CCTCACTGACTGGCCCATATTGATTTTTTAATTGGTCAAAAA 22419 36 100.0 38 .................................... TAGCCTAAATGCAAATAGCACCAGCCAGGAGGCTGATT 22345 36 100.0 45 .................................... TACTCTATTGTGTCCATTGACCACATAAATTTTGTTGTCTCCAAA 22264 36 100.0 35 .................................... AATTCTCCTTGAGACTTCATTGCTGATAGCCTAGC 22193 36 100.0 45 .................................... CGCAAACTATTAGAAGCTTGTCGTCTTCGGCGATCGCGCCTAAAA 22112 36 97.2 37 ...................................T CTGCTGCACAAAGAGACGCTGCGGCTAGACTGCAAAG 22039 36 100.0 41 .................................... TTCTTGAAAAAGCGATCGCAGCAATCTTACCCTTTAAACTT 21962 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 29 36 99.9 39 GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : TATCGAATTGATTGATTTTTTCGGATATTTGTGTTATGTTTTTGTATGTGATTTCCTACGATATTCCTGATGATAAACGCCGGAAAAAAATAGCTGATTTATTAGAGGGTTATGGTCAGCGGGTACAGTATTCTGTATTTGAATGTCAGTTAAGTAGGGAAAAGTACAATGATTTCCGTCGTCGGTTAAGGAAGATTGTCAAGTTAGAGGAGGATAATGTCAGGTTTTATCCTTTGTCTCGACATACTCTTTCTCAGGTGGAAACTTGGGGGGTGGGTGTTCCTGTGATTGAGCCTCCGGGTTCGATTATTGTGTAGTTTTTCCGAAGGTCAGGTAAAATGGCTGTAATGTTGATTTTTTCGTTGAGAACTTCGGTCGCTTGCTGGGTAAGGGTTTTGGGGGTTTTTTCCCGCTCTCTGTTAGTGGTTTTACCACTTTTTTTCCTGATCTTTGGAAACTGTCTCTGGACACCTTGCTGGGTAAGGGTTTAAAATTGAGGA # Right flank : TTGAGAAATTCCGCGATCCCAAACTGATGACTGACTTTTACAAGCAACATCCAGAGCATTTTAATTTTGTTTTAGGAGCGATTTTACATGAAAATCAAACTTGAATACTGTCCATTTGGTGACATAGGCAACAAAGAAATAACTTTGGCAAGCGTTGAAGTTGAGACGGAACATAATGATCTTTTTGAGTTCATTAATCCTGTTGTAAAAGTTCAAAGTTACCCAACAGCAAGCAACCAAAAAAACAAGCTGAAAGCCGCCGCAGAAAAAGCAAGTGCCAGAAAAGACATAGAAGAGATGGCTTTAAGGGCTTGGAACAGAGAGATTGAGGTTTCGATTGGATATCAGGGGCATTCTTATTCCCCGAATAATCTAGACCTGTCGCACGCCGTTTATGGATTGCCTTCTTTTAAGGTTTTGAGTATAGAAGGTAATGAAGATTTTCAAAGTAAACTCCCGCGTATTCCGAAAGGATGTGTTTCATGAGCGGGTGTTTTAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 34247-27488 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQS010000012.1 Anabaena sp. FACHB-1391 contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================ ================== 34246 37 100.0 39 ..................................... AGCTAATCAGTTGCATGATAAAGATATGCAACTATCCGA 34170 37 100.0 32 ..................................... TGCAACCTGAAACTATTAGATATTTGTCAGAA 34101 37 100.0 35 ..................................... ATTGATCATCAATAATAATCATCGACTTTTTTCCT 34029 37 100.0 35 ..................................... TTTACATTTAAAATGAGTTATTGATCATCAATAAT 33957 37 100.0 34 ..................................... TAGTAGCATGATTTTTTCTCCTAAGATTGTAGAT 33886 37 100.0 35 ..................................... TTTAGTAGGTTATTTTGTAGCATTTTAGGAGTCAA 33814 37 100.0 36 ..................................... TACATCTGATAAATTAGAATCTGGAAAATATCAGTT 33741 37 100.0 37 ..................................... CTGCTTTATTCAATGCTAAATTACCATTGACTAAAGA 33667 37 100.0 36 ..................................... TTAGAACGTTCAAAAATTGAATCTAATTCTGATTTA 33594 37 100.0 35 ..................................... CTAATAACAGGTTCTCCTAAGTATAAATGCATACC 33522 37 100.0 36 ..................................... CACAAAAACTCCTAATTAATGTTAATTGATCCCGGC 33449 37 100.0 37 ..................................... TGGTTTTTTCGGCATCTTCGCTTAGGAATCCCAGACC 33375 37 100.0 35 ..................................... ATGATGCTTTAATCCTGGTTTTCGTAGTGTTTAAT 33303 37 100.0 35 ..................................... CCTGCTGAACTCAAGCGTAAGCTTTTAAGAATTAT 33231 37 100.0 33 ..................................... GAGAAAGTAGGGGACTAACATTAAGAGAATTTT 33161 37 100.0 38 ..................................... ACCCCTATGAATAGCTTTAAGTAAGGAGTTAGGGTGGT 33086 37 100.0 41 ..................................... TTCCATATTTACATTATGTATGGATAGAACAAAAATGTCAA 33008 37 100.0 36 ..................................... GCTCATCAGACAAGGAAAGGTTTAAGTCAAAGACCG 32935 37 100.0 38 ..................................... CCAATGCCATGCCTAAAACATCTTCAGCAGTTTTGGGT 32860 37 100.0 37 ..................................... CATACTAGAAGCGCGACTACATATTGATTTAATTAAT 32786 37 100.0 36 ..................................... GGGCTAACAGATAGCCCCAACCCAGCCAAAGGCCAG 32713 37 100.0 36 ..................................... CCACCAAATGACAAATACATCAGATTTAAGTTTTTT 32640 37 100.0 38 ..................................... CCTCTGGTTCTGCAAGTTGAAATATGCTTACTTCCAAA 32565 37 100.0 37 ..................................... ATTATAAAAGAGTGGGAGAAAACAAAAAGAGTGGGAG 32491 37 100.0 33 ..................................... TATATGCGATCCACCGTGCGAGCAGCTTTTATG 32421 37 100.0 32 ..................................... TTAGAATCAAGAAAAAAGCTCGATTGATTCTT 32352 37 100.0 35 ..................................... GGTTTTTTCTAGCATAGCACAAAACAAGTAAACTT 32280 37 100.0 39 ..................................... GACAGGTAGTAGATAACTTGATATGATGTAAACATGATG 32204 37 100.0 34 ..................................... ATTTCAAGTAGAGACTCAAGCTCTAATCGAAATT 32133 37 100.0 35 ..................................... TAAATCAATTACAAGTAAACTTGTATATAGCTATT 32061 37 100.0 33 ..................................... GATACTGACCAACGCCTTGATATTTAAGGCAAA 31991 37 100.0 31 ..................................... TTGATTGGGATGTGGTTGCATGGTAAAGCAG 31923 37 100.0 35 ..................................... CGCACTGGATAATCTGCAAAAGCAATTTAATAATT 31851 37 100.0 34 ..................................... TTGAAGTGGAGTGAGTTATTTGGAGTAGAAACTA 31780 37 100.0 36 ..................................... GCAAGTTCATAATCAAACACAACTGTAGCACCTGTA 31707 37 100.0 34 ..................................... ATTTCTAATTCAGCAATTAGGGATTCACGACTAA 31636 37 100.0 34 ..................................... ATTAGACCCTCTCCGATTAGTGTTTGTAGGCGTA 31565 37 100.0 38 ..................................... AATAGTGAGTTGCAATTAAATAATGAGAAGTTGTGCCT 31490 37 100.0 34 ..................................... AACTAACAAAGATATGCAACTATCTGCTGAACAA 31419 37 100.0 34 ..................................... TTTGACAGATGCGCTTAAATATCTACTGTATTTG 31348 37 100.0 33 ..................................... CTTAAACATATTTTAGATGGTGGTACGTTTAGT 31278 37 100.0 35 ..................................... CTTCTTTTTTCTTCTTAGCAAATATTCCAATCTCT 31206 37 100.0 35 ..................................... AAAAAAGAAAAAATTCAGAAGACGATAGCATTTTT 31134 37 100.0 38 ..................................... GCTTATTTTCCCATTTTTCGCGCCGCTAATAGATTTAA 31059 37 100.0 37 ..................................... CTAATTCGACATTTTTTGAATTATTTACAATCTCATA 30985 37 100.0 34 ..................................... GAAATTAAAAACCACAAAACCCTTGATTAAATGT 30914 37 100.0 33 ..................................... TTCTATGTCGTCTTGGGTTGTGGTGACGGCTTC 30844 37 100.0 37 ..................................... TAGCAGGTGGTAGTTGTTTCATTTGATTTCTAGATAA 30770 37 100.0 41 ..................................... AAAACTATCACCTATATCGATCAACCCTGGTAATAACGACA 30692 37 100.0 36 ..................................... CAAATAACTGGATAACCTCACACCTATGAGATTTTA 30619 37 100.0 33 ..................................... CCCATAATTTTAGCCATTAATTATTAGAAAATA 30549 37 100.0 42 ..................................... CTAGCAGTTGGTTTTCTGCTTATGTTTTTACTATAGCAGAAA 30470 37 100.0 37 ..................................... AATATTTTTGAAACATTATCTATGCTACTAGGATATT 30396 37 100.0 36 ..................................... AAGACTGCGGAAGATGTAATGCAAAAAGTGGAAATA 30323 37 100.0 38 ..................................... TACACTTTGAGGTAGTAATAAGCTCATAGCAAAATAGC 30248 37 100.0 35 ..................................... TGAATCTCAAAATTGAAAGGAAGAGGAATAGGATT 30176 37 100.0 30 ..................................... GTCAAGCTAGGGGCTGATAACTCACCACTG 30109 37 100.0 40 ..................................... TCCTGTGGGGTGAAATTGTGACTTCCCACGATTACCGGGG 30032 37 100.0 36 ..................................... ATCTAAAAAAGTATACATTGAATCTATGTACACAAA 29959 37 100.0 38 ..................................... AACATTTTGGGGTATTAATATTTCTTATAAGGGTACAA 29884 37 100.0 35 ..................................... TATATAACGCATATATCATTTATACATCACGCATA 29812 37 100.0 35 ..................................... AAAACAAAGAATTATTTAGAATATCAAAAATACAT 29740 37 100.0 35 ..................................... AATTTTTGTTTGTAAATGAATCACAAATGAAAAAT 29668 37 100.0 40 ..................................... CTATTGTATCAAAATTTATTAAAGATTTGATTTATAAAGA 29591 37 100.0 35 ..................................... CAGAAGTGAAATTTGATATCTTTATGGCTACCTTT 29519 37 100.0 35 ..................................... AATTAGTAGAGGCTCTAAGGCGATTACCAGCGCTG 29447 37 100.0 35 ..................................... TCGTTGTGCGATCGCGCGAAAGCCGAAAAAATTAA 29375 37 100.0 36 ..................................... ATCACTATACCAAATTTTTCTAAGTATACGTATATT 29302 37 100.0 36 ..................................... CATATTTAAACCTGTGGAAACTGTCAAACTATTCTG 29229 37 100.0 34 ..................................... GTTGAGCTACTTGAATAACTACAGTTCGTAACTG 29158 37 100.0 34 ..................................... CTGAAGATGCGATCGCCTCCAAAGTATTAAAGTT 29087 37 100.0 35 ..................................... GTAGACAAAATCATCTAAATCATAACTCTCAAAAG 29015 37 100.0 35 ..................................... TTTTAAAATATTTTTAGATTGCGATCGCAACCCTG 28943 37 100.0 32 ..................................... CCTTGACGTTATCAGGCGTGCTATCGCCTAAA 28874 37 100.0 35 ..................................... AATTTCCACATCTCCATTAACAGCCTGACTCACCA 28802 37 100.0 37 ..................................... AACCATGCTTTACAATCTATGAAAAATGAACAGCAAT 28728 37 100.0 34 ..................................... GAGAGAAACAATGGCTAGTAAAAACAAACTGGAT 28657 37 100.0 34 ..................................... TGATCATCACGGGATGCCAGTGTGGGACTAGCAA 28586 37 100.0 36 ..................................... AAAAAATCTATTAACGAATCTTGCTTCATAGCAGGT 28513 37 100.0 34 ..................................... CGCTTAGAAGGCGGTAAAGAAATCTTTGGAGTCT 28442 37 100.0 34 ..................................... GTTTAAATTGCATTTGGTCGGGCTTCATCATTGA 28371 37 100.0 39 ..................................... ATTCCAAAAACAACTAATTCCGTGACAGTATTGAAAGGG 28295 37 100.0 36 ..................................... TTTTACGCTTACAGGAAGTACAAACGCTATTCCTGG 28222 37 100.0 38 ..................................... TCATAAATTCAAATAGCAAACATCACCAAATATTTTAC 28147 37 100.0 34 ..................................... AACTAAATTCACAGAGCGTCAATTCTGGTTTCTG 28076 37 100.0 33 ..................................... CTCTTAACTGAACTTCCCAGTTTTCAGAGTCAA 28006 37 100.0 41 ..................................... CCATCTAGCTTGTCTTTGAAAACAGGAGGACCATAGATATT 27928 37 100.0 39 ..................................... TATCAATCTTTTATTTTGTTTTTAATCATGTCTGCATTA 27852 37 100.0 33 ..................................... AACATTTGGGGTATAAGACTTGCTTATACAAAC 27782 37 97.3 80 ....................T................ AACGAACGTAGGGGTTAACGGCCGTTAACCCCTACACAATTGCAATTTCACTTGTGATATAGTGAATCTATAATCGTAAG 27665 37 97.3 35 ....................T................ ATTGGAACTATTGCAACGCCAAAAAATCATTCAAT 27593 37 89.2 32 G...............C...T..........C..... ATTGGAAATATTACTGGAAAGTCTATCCAATG 27524 37 97.3 0 ...............................C..... | ========== ====== ====== ====== ===================================== ================================================================================ ================== 93 37 99.8 36 ATTGCAATTTAACTTAATCCCTATTAGGGATTGAAAC # Left flank : AATGTTGTTATTTCTTACGATATTTCTGAGGATAAACGACGTACTAAAATCCATAGTATTCTCAAGTCCTATGGACAATGGGTGCAGTATAGTATTTTTGAATGTGAGTTAACTGATACTCAATATGCTAAATTGCGATCGCGTCTTAATAAACTCATTAAACCTGAAACCGACAGCATTCGCTTTTACTTCCTTTGTGCTTGCTGTTTTGGTAAAATAGAGAGAATTGGTGGTGAAGAACCCCGTGATCAGACAATTTTCTTTGCTTAATAATGCGCGGATGGGTGGGTGTAAAAAATTCAGATCAGAAAAAAATGCCTGCAATCATTTCTACACAAGCTTTTCATCGAGTTCATGGAGTTCACCCATCCGCGCACCTTGCACAGCAAGAGTTTCAGCTATTTTACCCCTTGACACTTTTTTTGAAATAGATTATCATAAGAACATCCGCGCAACTGAACCTTGAAAACTACATATATATAGGCTTTCAGCATTCCGCT # Right flank : ATTATTAAACTGTAACCTGTCACCTGTTCCCTGTCACCTGTTCTCTGTCACCTAATTGCAATTTCACCTACTCCCTAAGATATTGGATTTTGTTCCTCCACCCAAATTACATAATTTATTTCGTGGGTAATTTTGGATGTTCTTGGGAGTATTTACTGACTAGGTTGGATACTTCCGGGTTATACAGTCGCAGGTAATTCCAGTAATTACCGAATACTTGACGGACATAATTTTTGGTTTCATCAAAGGGAATTTCTTCTACAAATTCATCAGGATCTTTTTTGGGTATGGTTTGCAACCATTTAGCTACATTACCCGGACCTGCATTATAACTAGCGATCGCTAACATGGAATTATTGCTATACTGTCGATGAGTATAATCTAAGTACCAAGTCCCCAACATAATATTATCATTGGCATTTTCCAAATTGATTTTTTTGATATCTGCATTCATTTGTGGGGCTATCCACGCTGCTGTACTGGGCATAACTTGCATTAAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTAACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 2501-2827 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJQS010000069.1 Anabaena sp. FACHB-1391 contig69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 2501 38 97.4 37 .....................................C TTAATAAAGTTCCCAGGAAAAATCCAATTCCACCTAA 2576 38 100.0 32 ...................................... TAATATGGTGTTAACCCCTGGCTTTCTGTTAC 2646 38 100.0 35 ...................................... GCTTATTTTGTGAAGATTTAATCAGCCGCTCCCTT 2719 38 100.0 33 ...................................... ACAACACATTCATCTGTTTCTCGAAATCATTAA 2790 38 97.4 0 ...................................G.. | ========== ====== ====== ====== ====================================== ===================================== ================== 5 38 99.0 34 GTTTCAACTACCATCCCGACTAGGGGTGGGTTGAAAGG # Left flank : TCGGTCTAGTTTTGTTGACAAATCCGAACTTTGAAAATATTATATGGATATAATAGCGCCGTAGTTCATGCTCTTTGGAGTCTCTGTACTATGAAAAATCTGGCTTAGTTTGGCGGTTGGAAGACTGTCATGCTTTCTGAGCCTGGTAGCTGCCCGCTGCTGATGCTGCTGTCGCCAGACAGGATAGGTGCGCTCCCAGCAATAAGGAGTAAGGCTTTTAGCTGTAGTCGTTATTTATAACGATGTGGATTTCCACAGTGGTGGCTACTGAATCACCCCCTTCGTCGGGGGAATCCTCTTAAATCTTTTTTTTGGCAAACCATGAGCGGGGGTAAAAACTCCAGGGATCTGCCAAATTCTTGAATCCCTTGTCCAGTATTGATTTGACTCGTTTGAAGAGTGATGAATGTCTTCTGTTGAGGGCAAAAAAACAGATTTTTTAACAGGTTTGCCAAAATTGCTTCTGGAAACCTGTATTGGCAAGGGTCTAGACGGGCGCG # Right flank : GAAAGGAAAGATAAACAACTCTTGGAATGCGTAAGCGTTGCGCTGCTGCAAGCAGTTCGCTGGTTAAGCAGGTTTGGATTTAAAATAGTTACAAAATAGAGTTGATTATGGGAGGATTGAAAGGAGTGCTGCGATCGAACCAATAATTGAACCAATATATTAATAATCATTGGTTTATCATGGATGATTTTCAGCGACATTATTGTGTTAACGGTTGAAAAAATGAATTCGACGACACTAATCTGTTAACAGCGACATGAATTTGTTAATAACGACAAGAATCTGTTAACGACGACAAATAATTTGTTATTCGACAACAACAAATGGAGAATAGGAGACTCGAACCCCTGACCTCTGCGGTGCGATCGCAGCACTCTACCAACTGAGCTAATTCCCCTTATTCGTGCTTATGAGTTCTTATCTCTAATACACATACTCTATTCTAGCATTCAGAAACAATAAATTGCCCATCTTTTTTTAAAAAAACTTCCTGTACCTGC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTACCATCCCGACTAGGGGTGGGTTGAAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.10,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //