Array 1 758-1322 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFEU01000039.1 Pseudomonas rhodesiae strain DSM 14020 39_33044_68.6054, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================= ================== 758 27 100.0 33 ........................... TTATCACTGCAAACAAAGCTGAGCGCAGAACTG 818 27 100.0 33 ........................... TGCGACCTGGGCCTAGCCCTGCACTATGAACGT 878 27 100.0 33 ........................... TCAAATCATATGGTGCAGGGAATTTTCCTGCTG 938 27 100.0 33 ........................... GTGCGATAGTCAGCGCACTGACGATTGCAAGCA 998 27 92.6 31 ...........C.............G. CTGCGGAATCGTTGAAGACGGCTGCGAAACT 1056 27 85.2 33 .......A....A.G..C......... GTACGATCTCGGGAATTTGCGTATCTGGGATAC 1116 27 85.2 32 A...........C....C.....T... AACCAGTGGGGCATCGTCATCGGACGGCTTTT A [1138] 1176 27 88.9 33 ..A.........C...........T.. GCATAATCAGGAAATGGGAGGTGAGCCCTGTTT 1236 27 74.1 33 ..A........C.....C..T...GGA AATAATCGACCGATCTAGGGGCAGACGGGCTAG 1296 27 85.2 0 .......C.T.......C..T...... | ========== ====== ====== ====== =========================== ================================= ================== 10 27 91.1 33 GTGTGCCGCCGTGTAGGTGGCTTGAAG # Left flank : TCAAAGACGCTTGCGTCATGCCGACAGCTTTTCGCAGTGCCGCGCTCGGCGACGACAGGGCCGAATTTAGGGCCAAGTGCATTGCTGTCTTCGATAAATACCGGGTTTTGGAAACCATGATCGAAACAATTAAGGACGCTTGTGATTGTCATCGCCGTTGATGAGAGCCAAAAGCGTTCGCTGAGGAGATCCAGGCGAGTGTTATCCAAATGGCTCAGCCAAATAGGCTCTCGCACATGGACTGGGAGCCTAAGCCAAGAGGGTATCCAGCAGATGCGCAGCGAGCTTGCAAAGGCAGCGAGTAAAACCAGTGCTGTGGCCGTTTTTGCTGTGCGATCAGGGCGCAGAATGACTCTTTTGTTCTTCTGTGGTGCTCGAACCGATTGGGATGAAAATGGCTGGTTTTCTCATAAATCTATCAGCGCAAAATGCCTCATTGATAGTGACTATTTATTGAAGCAAGTGATTGAAAAATAGAAAGTAATCGCGGATTTATAACA # Right flank : GGCGTATGTTTCGAGTAGCCCAATAAGCTCGAGTCAGCGCCGTTTTTTGGGGTTCAACAGTGTTGCGCGATAAGCCTCGCCCTTCAGGGCAGTGAGGATGTCAACGATACAAAGAATTACTGACCAATAAACACCGCTTCAACTGCCGCCAAGGCTTGGCGCGCCCCCTCAAGCTCCGGCTGTATCAGCGTTAAGCCCCCCAGGTCGTTGCTCATCACCGACACGCAATCCTGAAGCGCTTTTTTGGCCTCAGTGAGAGCAGCCAACAGAGTAGAATCTTTGGCCTCCGCAGTAGTCGATGCCCCTTCTACTACGCTGAGGCGTTTGCTGAGAACGAAGTAGATGTGCGGGAAAACTAGCTCCTGGACAACACCTGCATTCTTCGCTGCTTTTGCTGACGCTTCTTCAACGATAGAGATCAGCTCTGCCTTGTGGATCGGGTTGAATAGTTGTTGCATGTGGTGGCTCCCAGTGACGAATGCCCCCAGCATGCCGGCCAT # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.55, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTGCCGCCGTGTAGGTGGCTTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //