Array 1 32653-31527 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYUL01000009.1 Bifidobacterium pseudolongum subsp. globosum strain 2083B Contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 32652 36 100.0 28 .................................... CGATGAACGGGAGCCATGCGACGTCCCG 32588 36 100.0 28 .................................... GTCAATCACGACGCCCCCTTGTAGGGAA 32524 36 100.0 28 .................................... TCAGCGAGGAACACGGATTAGGTGACAT 32460 36 100.0 28 .................................... TCCTTTGTCGAGGGCGACTTCGAGTCGT 32396 36 100.0 28 .................................... AAAGCGACGAGGTGTATGAGGTGGAATC 32332 36 100.0 28 .................................... CGGCGTGCAGGATCTGTTTGAGCCTCGT 32268 36 100.0 28 .................................... CTTGATGGCAAACATTCATTATCCTTTT 32204 36 100.0 29 .................................... TGCCAGACCAGGGTGACACGGGGTGGACG 32139 36 100.0 28 .................................... CGGCCGGTGGTGCATCGAACAGCATGGC 32075 36 100.0 28 .................................... ACTTGGGAGATGACGTGTACGGGCGTTA 32011 36 100.0 28 .................................... TGGAGTACTGTCGATCAGACGAATGTGA 31947 36 100.0 28 .................................... GTTCTCCCACACGACCACGCGAGGCTTC 31883 36 100.0 28 .................................... TGGGATACAGGGACATTGTACGATTCAA 31819 36 100.0 28 .................................... GCGGGGAGTCTGGTGTGTCGGTCTGTTC 31755 36 100.0 28 .................................... TGTGGGCATGGGTAGTGTGGGTTGATGG 31691 36 100.0 28 .................................... GCCGCAGGTGCAGGCCGATTTGGCCGTT 31627 36 100.0 29 .................................... ACGCGCTGCAGAAACTGGTGCATGCCCAA 31562 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 18 36 100.0 28 CAAGTCTATCAAGAAGGTAGGAAGCTAATTTCCAGC # Left flank : CTCAGTTCAATGGAGGGCTGACAATTCCCAGTTCCATTGACGAGTTTGCGCAGCAATTTGGCTTGTATTGCGAGTCAAAGGAGAGAGTATTGACAACTCCGATTTTTGGAGGACAGGATGAAAAAGGATGAGGAGAGTGGGGGAATGTGGTGCTTGGTGATGTTTGATTTGCCTGTGCAGACCAGGAATGAACGACGCGAGGCAACAGCGTTCAGGAATATGCTGCTTGATATGGGTTATATGATGGTGCAGTTCTCCGTGTATGCGAGATATTCACCAACCCAATCGGGAAACCGATCCACGGTGAAAATGATTAAGCAGCATTTACCGTCCGGCGGGAAAGTACGGGTGGTGCATATTAGCGACCATCAATGGGCACAATCTCTGCGTTTTGTCAACGAGGTTCCTCAAAACGATGTGGAGGCACCAGATGTCTGCACTGTTTTTTGAACATCTTTTTAATAAAAATCATTGGGAAACCTACCTTCTTGGCAGGCTAT # Right flank : ATGGGTCTACTTATCTCATGTGTCAAGGTTAGTTTATCAAAGAGCGAGCCAATTTGCAGACTCCCCTATCCCGTTGTCTCGATGAAAGTACAACGCCCAATAGATTGGTAATTGTCCAGAAAACCAGTCCGAGGGGATTTTGATCTATGAGAATGATATATTCGCATCTGCTTAGAAGACCAATGGCCATCCAGATTGATATCGGACACAGCACCGGCATAGGGGCAATAGGTGCGATGCTCGGGTGTAGCATATCCACCATCAGGAGGTAGATCAAGCGCGATATCTGGTTCCCGTTTAACGAGAGTGAGTCCTATTACCTAGGTCAAATGCCTCAAGACCGGTCTGTAGCCGGTCTATTGCATTGCTGGCCTCGCGCAATATAAGCGCAGACTGAAGCGGTGCAGCCGCAGGCGGTCGCATGGCTGGACTGTGGTCGCTTGCTGCTGCCGGTGTCATGGGCAGGCTGCGTGTCCTGTGGCCAGATGATCGGCTCATAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTCTATCAAGAAGGTAGGAAGCTAATTTCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //