Array 1 212543-211977 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABIZJ010000001.1 Ligilactobacillus animalis isolate MGYG-HGUT-00097, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 212542 36 100.0 30 .................................... AAAGGAAATAACGTAGGCGTCAGTGTTTTT 212476 36 100.0 31 .................................... TAGCAACGATATAGCCTAGATATTCCTTTAA 212409 36 100.0 30 .................................... TACAACTAAAGAAATTAAAGACGACGAAAC 212343 36 100.0 30 .................................... TGTCCCAAAAGAACAATTTACGCCTATCAA 212277 36 100.0 30 .................................... CTTAGCAGCAGCTGCTGGAACTTCTGCACC 212211 36 100.0 30 .................................... TCCGAACAAGCCTACTTCTCCACTTGGAGC 212145 36 100.0 30 .................................... ACCGATTGAAGAAACGCTTTGATGACGTTT 212079 36 100.0 31 .................................... CATTGTTAGTCTAATGGCTAAAGGCCTATGT 212012 36 80.6 0 ........................AA...TT.GT.T | ========== ====== ====== ====== ==================================== =============================== ================== 9 36 97.8 30 GTTTTAGAGCTATGTTGTTTTGTATGACTCCAAAAC # Left flank : TGCGGATCTGGAAAGACAATTTGGTGAAAAAGAGGAAGTTAAAGCCAGACTTGAGTTATTAGCAGTGGAGATAGCAAATATTATTTCGAGTGAATGTTTAGAAAATGAGTTAGATCTTGAGTATGATGAGATCACACTGCTAGAATTGATAAAGGCGATGGGTGTAAAAATCGAAACGACGATGTCATCGGTTTACGAAAAATGTTATGAGATAGTGCAAATTTTCAAATACTTAAGTAAGAAAAAATTATTAGTTTTCTTAAATGTTGGTGCTTATTTGACAGAAAAACAAATAAGAAGCTTACTTGAGTACATTGAACTGTGCAATTTGAATGTCATATTCCTTGAGCCAAGTAAGTTGTATGACTTACCGCAGTATATTTTAGATAGTGATTATTATTTAGAGTATTTGAATAGCTCTTCGGAGTCATAGAAAGCGAAAATTTTGCTAGAATTAGTAGCGCGATTACGAAACCACTGTGCCATTTTTTGCATTTGAG # Right flank : TTTCCGGTTGAGAATATGTGCAATTGAAAAATATTTTTACAGTATTTCTATTGACGTCAACTTTATAATTTGATATTATATTAGCGTTGTATTTGTGCATGCCACAACTGCAACCGCACGTTTTAAGTTCAAGTGCTCTCTGAGCCACTACATTACGGCGAGTCTAAGTAAAATACAAGGAGGTGCACATTAATGTACGCAATTATTGAAACAGGTGGTAAGCAACTTAAAGTAGAAGCTGGTCAAGCTATCTACGTTGAAAAGTTGGCTGCTGAAGCTGGTGAAAAAGTAACTTTTGATAAAGTTGTTTTAGTAGGCGGCGAAAACACAGTGATCGGTACACCTTTTGTTGAAGGTGCTACTGTTGAAGGTACTGTTGAAAAGCAAGGTCGTGCTAAGAAAGTTGTTACTTTCAAGTACAAGCCTAAGAAGCATCAACACACAAAGCAAGGTCATCGTCAACCATACACAAAGGTTGTTATCGACGCAATCAACGCATA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGTATGACTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.30,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 221989-222619 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABIZJ010000001.1 Ligilactobacillus animalis isolate MGYG-HGUT-00097, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 221989 36 100.0 30 .................................... AGTTATCCATGAAGGTGACGTCTTTGAAAT 222055 36 100.0 30 .................................... GTATAACGCAACTTTTGACGAACCTGGTAT 222121 36 100.0 31 .................................... TCACGGGTACGGGACACCTGGTGGTTGTTTT 222188 36 100.0 30 .................................... GAACGAGACAAAGCTAAAGCAAAGGTAGAC 222254 36 100.0 30 .................................... TAAAGCTGATTTGATATAATTATCCAAGTC 222320 36 100.0 30 .................................... CGATACAATGAATACAGTTCTTATCAACAT 222386 36 100.0 30 .................................... TAATATCGATTTAACAGGTTTGACAGACGT 222452 36 100.0 30 .................................... CGCGTTAAGTCCTTGCCACATCCGAGAGCG 222518 36 100.0 30 .................................... CGAAACATCGCAATCTGATGCTGATTACGC 222584 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGTATGACTCCAAAAC # Left flank : TATTCGTCTAATTCCATTGTTTTGATCCTGTCAAGTGGCCATTCTTTCAAAAATTCTTTTGCCAACTGCATATTTTGTTTCTTCCATGCCTCTGCTCGTTTTAACAGTGCTGATTTATTTTCAAAATACCAATCCGAAAAGTGTTTTATATCGATTTTTACCATCCTGTCACCCCATCGTTTTTATATAGCATACAATAAGCTTAGTAGCCGATGCACCTAAAACGCATATAAATTTAGACAAAAAAGTTCCATTAGAAAATTTTTCTAATTTCTTAAAAAGCATCTCAATAGTTAGATAGTGACTCTAACAATTAAGATGCTTCATATTAATCTAGTACTGAAAATTTTAGACAGTTATATTTTGGCTTAACGTAGTGTATAATTATAATTGAATTATGTATTACGTTAATGAAAAAACATGGAATCATACAAAACTGAAATCTTGCTAGGATAAGTAGCGCGATTACGAAACCAAAACGACATTTTTTTGCATTTGAG # Right flank : CAAGCGAAGAGATTGGCGAAGAGCGTCAATAGTTTTTTTGCATGACTCCATAAATGAGTTAGTGCACTAGAACATACTGAATTATTTTAGAACTATTATTTAACGGCTTGATTCTTTTAGCAGAATCAAGTTGTTTTTTGTGTAATCACAAAAATAATATGATGGTGTTTTGAAAAATCTTATGTTGTATCCTACAAATAAAAACTAGCATGTTGACCTCTGTAATACTTGATAGACAGCAAAAAAGCGCCTAATCAATAGGCGCTACGTACTTACCTGTTAGCACACTTCCATTTTTCCAATCCTTTAAATACCAGGACAACACTTGCAATCACTAATAAACTAACTAAAATATTAACGACTAAGTTCACTTCAGCAGAAGGCATCAACTTAGCAATAAACAAACTATAAAAATACTGCGTGATAAAAATAGCAACTACAATGGCAATACTCATTTTATCTTTCATGTTCAGGAGCCTCCTTGTGATCACAAAGACAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGTATGACTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //