Array 1 372497-369533 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010451.1 Corynebacterium glutamicum strain B253, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================= ================== 372496 29 100.0 32 ............................. TACTCACCGGGTACACCATCAGTGAGGGGATG 372435 29 100.0 32 ............................. GTGTGTTGGCTGCGGAGTCGAATGTTCTTTTG 372374 29 96.6 32 ............................G GCAAAGGAAGAGCGAATCCAGATCGCAAAGCG 372313 29 100.0 32 ............................. CAGTGCCGATCAGGTAGATAAACTCAAGGTTG 372252 29 96.6 32 ............................G TGTTTCCAGCACTCCCGGGGGCCGTTCTTGTT 372191 29 96.6 32 ............................G GATGAATCCGTTCAGCTTCGCGATGGTCGTTG 372130 29 100.0 32 ............................. ATCACCAGGCCACCACAAACCAACCGAAATAT 372069 29 100.0 32 ............................. GAATCGACGCTTTTAATCGCGGAGGGGTCGAA 372008 29 96.6 32 ............................G TTCTTCTGGCGAAGCGGACGCAACCAAGGTTC 371947 29 96.6 33 ............................A GGGTGGCAGGCTGAATGCCGAGATATACAGGGT 371885 29 96.6 33 ............................A GGATCGTAATCGCGTGCAAGTCGGACGCCTGCT 371823 29 96.6 32 ............................G GCGTGGAATGCGTACCGGAAGGGTGAACAGAT 371762 29 100.0 32 ............................. TGCGCAGCAGTCTGCCCGCCCATATGAGCAAT 371701 29 100.0 32 ............................. CTCACATCTTTAAGTAGCTGCATAACCTCAGG 371640 29 96.6 32 ............................G CTCAGCCTTAATTTCTTCCACATCAAGCCCCA 371579 29 96.6 32 ............................G TAGTAGCCTCCGGAACACCAGCCAGGACAGTC 371518 29 96.6 32 ............................G TTTGTCTACCTGATCGGCACTTGTTTTTACCT 371457 29 100.0 32 ............................. GGTCGCGCCTGCTGCGATACCCAATGCGCTCA 371396 29 96.6 32 ............................G CCTCCTGATTAAGATTCGGCCAGATGTGATGT 371335 29 100.0 93 ............................. ACGAGCGTGGCGCTGCTCTGTATCGCCGATTCGACGTGTCGTCTCGGCTCCAGATGGTCCCACGAGCGTGGCGCTGCTCTACTGCCTGCTTTT 371213 29 96.6 32 ............................G TCTCCCCCATTACCGTGGCCGTCGACAAGGCG 371152 29 96.6 32 ............................G GTGGTCGTTACTACCCCGGACTTTGGGGACCG 371091 29 100.0 32 ............................. TCCGTCAGCATCGGCTGCCACTTCCTCTGAAA 371030 29 100.0 32 ............................. TGCTGGTTAAACTTCGCCCCTCCTATATGTGG 370969 29 100.0 32 ............................. TGCGCTGGTCATGGTGATCGGGGCAACTGGGC 370908 29 96.6 32 ............................G CACCACCTATTGCCTGAGCAGCACCACCAATC 370847 29 100.0 32 ............................. CACAGTCAATGAATCGGCCATCGAACCAATCA 370786 29 96.6 33 ............................A GTACCTTTCTCCGCACCTGGCCTAGCGGGTGTA 370724 29 100.0 32 ............................. TACTGGAAACCATGCTTTCGCAGCTTGGAACA 370663 29 100.0 32 ............................. GGGGCCGAGCGTCGCTCGCACTGTAAGATCAT 370602 29 100.0 32 ............................. TGTCGTCCCAATCTTCACCTGGGAAGTGCTGA 370541 29 100.0 32 ............................. ATTATTTCAAGCCCCGCAATGACGCGGGGCTT 370480 29 96.6 32 .....................G....... TATGTCACGTTTAAGCAAGCCAGCGACCGCAT 370419 29 96.6 32 ............................G GATCTTAGGCAGCTGGTTCTGGGGTGCACATC 370358 29 96.6 32 ............................G ACTATGGATGTGGGCACGCTCTGGGAAGAGCA 370297 29 100.0 32 ............................. ACATCGAGCAGCATCGGCCCTGTGGATCTCGG 370236 29 100.0 32 ............................. AAGGGCACGTGTCTGCGGGGTGGCTAGGTAAG 370175 29 96.6 32 ............................G TGCTATGCGTATGCGACAGTGGTGCTTTACCG 370114 29 89.7 33 ...................A...C....A GCTGTGCCCAGGTTTTACTAACGTTGGTCGCTG 370052 29 100.0 33 ............................. AAGCTCGACCATCTCTGGGTTAAAACTAACCTC 369990 29 96.6 32 ............................G TCCTGAAAGTTTGGATGTGAGCTTGTCGACGT 369929 29 96.6 32 ............................G GCCACACCATCTAAACAGGAAAGAGTGCCAAA 369868 29 96.6 32 ............................T GGTGCCCCGGCTGAGGTGGTGGCGCATGTGGC 369807 29 100.0 32 ............................. ACTATGCTTGCAGCTTTGCGTAATCGCGATGT 369746 29 100.0 33 ............................. TCTCAAGCCTTTAGTACTCGGCAAGCGCTTCCC 369684 29 100.0 33 ............................. TCTCAAGCCTTTAGTACTCGGCAAGCGCTTCCC 369622 29 100.0 32 ............................. GCGCAGCAAATCAGGATTACTAAAGAACCATA 369561 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================================================================= ================== 48 29 98.2 33 GTTCTCCCCGCTCAGGCGGGGATGGTCCC # Left flank : TTCTTATCGTCTTCAAGCCAGCCGTTGATGATGACGTCGAGTCCATCGAGTGCTTTGATACCTGGGCGTTTGGTGGGTGTGGGTGGTGTTGGTGAGAAGTCTTCGATGTTGGTGTATTTCGCTACCGTGTCGCGGCTGATACTAAGCCGGCGGGCGATTTCACGGTTGGAAACTCCCTGAGAGTCGAGTCTCCTGATATCTTCTACAACGGTCATGTGTACCGTCATCTTCTTTCGTGTTCCTTCCTGTTAAGACGCTCCGCTTGTGAAAAGGGTTGGGAAGCGTCGAGGAGGAACTTATCTAACGGTGGCGGTGCACATGACCGTCAGGCTTTACATAGATACTTGAGCATGCGGTGAGGACCGGCCACCTGGTGGGTGTGGGGAGGTGGCTGGTTTTTCGTGCTTTTTTGGCAGGAAACCAGCCGCTGATTTGGCCGGGTTCTTCTGCTTAACTGGCCTACAAACAGTTGATCACACACAGCGTGGGGTGAGCTTACC # Right flank : ATTATCGGATCAGCTACTCGAGTGCCTCGCTGCGGCCCACCCTTAGAAAGATGTGCGACAGGCCCCTGACGGATCCGCACCGTTTTCCAGTCCCGGCGCGCTCCGCGGCCATCTGTAGTCGCAAGTCATGGGAGATCAACCCACATCACAAACTCGGCAAAAGCGAACTCACTTGTACCATCATCGTCAGCAGCTGCGAAAACTAGGTAGTGAAACCAATCGAACGCCCCTGCCCCACCTGGTTTTAAGCCCAATGATCAACATTAGGCCTGACTCTCCTTGGTGCGTGCCCCACGACGACTAGATTCCAACGTCGCGGTCAATGTACGTGCATCATAGCTTCCAGTCATCCGGTAACCATCAATGAAGAACGTCGGGGTCGCATGAGCGCCACTTGCTGCAGCACTAGCAACATCCCGTTCGACCCTCGCGGCAACTTCAGCACTGTCTAGGTCTTTAACGAACGCCTTGACATCGAGACCGAGTTCAGTCGCGTAACC # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCTCAGGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.60,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 380209-375419 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010451.1 Corynebacterium glutamicum strain B253, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 380208 29 96.6 32 ............................G TGGGGCATGAAAAAATGCCCCCACACCGTGAT 380147 29 96.6 32 ............................G CTGAAAATGGCCGGTGCGAAGGTGCGCGATTT 380086 29 96.6 32 ............................G ATTTCACCACTAGTGCGGGTCTCTGCGGAATC 380025 29 96.6 32 ............................T GACGGTGTGGGTGATGGTGCTGTCACGCTCCA 379964 29 96.6 32 ............................G CGTTGATAGCACCCAAATTCCCAGCACCCTCA 379903 29 96.6 32 ............................G GTGATCATGGAATCAATCGCAAAACCATGAAC 379842 29 100.0 32 ............................. GAATGGGCAAAAAACGGCGGAAGTTTCGCGTC 379781 29 100.0 32 ............................. TGGCCGTCATCGTATAGGGGACTAGGCCGTGC 379720 29 96.6 32 ............................G CTTTTGATCCGCAACCAACGAATTGATCTCAG 379659 29 96.6 32 ............................G ACGCGCAGGATCAGCGATTGTCTCAGTAACAG 379598 29 96.6 33 ............................A GCTTATCGTCCCTGATTCGGTATTTGATCTGGC 379536 29 96.6 32 ............................A GCCCCTGTGCGTGCCTGGTGCGCCACCGCATA 379475 29 96.6 32 ............................T GCGTTTGCGACTGGGCTCAAGGTAGGTGATTG 379414 29 96.6 32 ............................T GAGTGATTTGATTGTGTCCCCGCACATGCTGC 379353 29 96.6 32 ............................G TCACCGTGGACGTAACCGTCACCCTGGACCAC 379292 29 100.0 32 ............................. AGATGGGTGGAAAAGGTGCACGCGCACCAAAC 379231 29 96.6 32 ............................G ATCAAAGCACTCATCAAGGACAAGCAACTCAA 379170 29 100.0 32 ............................. TATCCAGTCCTAATCAACGCGATCATTACTCG 379109 29 100.0 32 ............................. TGTCGTCATCGTTGATGAGATTTGCTGAGTTT 379048 29 96.6 32 ............................G GGCAGCGGCGTTCGCAGAGGAGTTGACTGCAG 378987 29 100.0 32 ............................. AGCTCCCCCTGCTCGGCAGGCTGTGGGTCACT 378926 29 96.6 32 ............................G GTGGAAAAGGCGAAAGCTAAGGTCACCGACGA 378865 29 96.6 32 ............................G GATTCATACACGCTGACTAGCGGTTTTGGCCC 378804 29 96.6 32 ............................G GTATTGCTTGTGGATCCAAGTGACCGGATTCC 378743 29 100.0 32 ............................. CGCCCGCCCGGATCACGCCAAAGATGGCGAAT 378682 29 100.0 32 ............................. CGCAAACAGGATCGCGTGAAGCTCACCGAGCC 378621 29 100.0 32 ............................. AGCGCATGCAGCAGAACCAGAACGCGCCTGCA 378560 29 100.0 32 ............................. ATGGTTGGGTTCCACCACCGGGAACCCGAATA 378499 29 100.0 32 ............................. CGAATACAAGGAGGGGTACGCCAAGGCGAAGA 378438 29 100.0 32 ............................. GCCATAGTGTCCTGCCAACGCCCATAAGACGA 378377 29 100.0 32 ............................. CATTGTTTGTGGTTGTTCATGTAACTCATTAT 378316 29 100.0 32 ............................. AAGGGTTCGTTGGCGGTTCAGGCTGCTCAGAA 378255 29 100.0 33 ............................. GGTTTGGCAACCGACGTTGAGGAAGCCGCTGAC 378193 29 100.0 32 ............................. CCAAGGTCATCGATCTGGATTCGGCCAGTCTG 378132 29 96.6 32 ............................G TCCGGCACCATCGTTCTTGAGGCGGGTGACAC 378071 29 96.6 32 ............................G GCAGGTGGAAACGGATTTGGTACAGGTTCCCC 378010 29 96.6 32 ............................T GCGGCTTCCTGTCGATCCTCTTGTGCCATGCC 377949 29 96.6 32 ............................T GACGGTAAAGACTTGCAAACGCTAGTGGGTAT 377888 29 96.6 32 ............................G GCCAGCGGAGTGTGGTTCAATACCGACACCTT 377827 29 100.0 32 ............................. CCAATTTAGGAGACACTAATGGATTTGACCAC 377766 29 96.6 32 ............................G CGAAGCGGGAAAGCTCGTAATCTTTTTGCTTA 377705 29 100.0 32 ............................. AAGAATATTAGACACTTTCGTCTTACCCTCCG 377644 29 100.0 32 ............................. CGATTGCTGCATGGCCTCGTGGTAAGGATTCA 377583 29 100.0 32 ............................. CCAATGCACTCCGTCGGTGCGCTTGCCCTGCA 377522 29 100.0 32 ............................. CGCCTACCGCAGGAACCATCCAGTGGTTCCCC 377461 29 100.0 32 ............................. GTCGTTGAGGGCTTCGTTGCGCTTAAAGTCGG 377400 29 100.0 32 ............................. GGCGCTTTTACCGGCCACGGCGGGACTCCTCA 377339 29 96.6 32 ............................T AATATCGGAACCAGTTGTGCTTGGATCTAGCT 377278 29 96.6 33 ............................A ACCGACTCAAGCAATAGCTTGGAGGTTCGACTC 377216 29 96.6 32 ............................T TCAGCTACAGCATCACCTGTTTTATCAATCGC 377155 29 96.6 32 ............................G CTGCTCAGACAAGTAATCAGCGATCTCCCTTT 377094 29 96.6 32 ............................T GTTGGTTGCACCTTTAATAGTGGGCGGCACAT 377033 29 100.0 32 ............................. GCGGTGTACCGGGTGGAGCACACCTGGATGCC 376972 29 100.0 32 ............................. TCAAACCTGGACGATGTCCTCCGCAAGAGCAA 376911 29 96.6 32 ............................G CTCTCCACTGGATCTACGCTCTCAGTGGAGGG 376850 29 96.6 32 ............................T GCTGCGACCACGACCGTGGGCCATGTGCAGCA 376789 29 100.0 32 ............................. GACCGTGTGGTACGACTGGGTGTGGGTGCCGT 376728 29 100.0 32 ............................. TCAATCATCGGCGGTTCTTGAAGCGTTGCACC 376667 29 96.6 32 ............................G TAATAGCAGTTTTGGTGATTTTGACACTGAGT 376606 29 100.0 32 ............................. CGCCGATTCAGTGCCCGAGTGGTGGCCTGAGT 376545 29 96.6 32 ............................G TGGGGGTTGGACACCTATGCGGAGATGAGTGT 376484 29 100.0 32 ............................. TACTTCAAGCCCCGCCCACCAGCGGGGCTTCA 376423 29 96.6 32 ............................G TGAGAGCGCCGGTAACAATATCCCACTCAAGC 376362 29 100.0 32 ............................. TCAAACCTGGACGATGTCCTCCGCAAGAGCAA 376301 29 96.6 32 ............................G TAGCGCATGCCATTGTGTCTAGCGCTGCGGCA 376240 29 100.0 32 ............................. ATCTAAGACAACATCTCTGAAATATGGCCTCA 376179 29 100.0 32 ............................. GCGTCACCGGCAAGGGATTGCACCTGCCCCTT 376118 29 96.6 32 ............................G TACAAGTATTTGCTTGATCATCAGCGGGCTTA 376057 29 96.6 32 ............................G GCGAAGAGGTGCCATCGCTAACACAGGAAAAC 375996 29 96.6 32 ............................G TTGGCGACCACATGAAAACCCAATGCTGATTC 375935 29 96.6 32 ............................G GTGACGTCGATTTCGATGGTCTCCACCTTCTC 375874 29 100.0 32 ............................. CGGATGCCCCTGAGCGTCTCATGGGTTACCGC 375813 29 100.0 32 ............................. GTGGTATTCGGCTCAGGAAGCTTTGGATGCGG 375752 29 96.6 32 ............................G GCTTTCTTGGAGGCGCAGCAAAAATACAACCA 375691 29 100.0 32 ............................. GTAATCGCGATCGTCGTGACCTCATTGACAGC 375630 29 96.6 32 ............................T GATCCATGGGCTGCAGGCAGCTGGTCTGGGGT 375569 29 96.6 32 ............................G TTCCTCATCCCGCTGACGGTTACGCACCTCTT 375508 29 96.6 32 ............................A TCGATGTCAATCCAAGCGCCCGGCTCATCAGC 375447 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================= ================== 79 29 98.1 32 GTTCTCCCCGCTCAGGCGGGGATGGTCCC # Left flank : AAGAATTTTGGGCCGATATTGTCCAGCTTTGGGATGGAAATGATCGACGCGTTTCCGGAGGCACGAATTATGGGGATCCTGTCCATTTTCCGGAGTCAGAAAAATGATTACCGTTATATTATCTTCACCTCCCGAAAAATTACGCGGGCATCTAACCCGCTGGCTTATCGAGGTAAGCCCTGGCGTATTTGTAGGTCGCCCTACAGCCAGAGTCCGAGACGAAATATGGGACATGATCGTATCCACTCTTACCAATGGACGAGCAGTTATGACATTTCCGACTCGCGACAATGAACAAGGTTTTGACATCCGCGTACACCGCAGTCAATGGGAGAAGACTGACTTCGAAGGTGTCACCCTAATGCGACATCCTATATCGACAGCAAAAGGTTCGATGAAAGCCGGGTGGTCGACAGCTTCACAGCATCGTGCTGCTCGTCGACGCAAAGCAAAATGATATAAAATGACGAAAGGACCGAATATTTTCCCTGGTTATTTAG # Right flank : ACACGGTTGCCGAAGCGTGTGTGTTTTGTCAACTTTTTATCGGCCAAAAGAGCACGGAAAAACCTACCACTTCAGCAGTAATACCCGCCAAAAGAGCACGGCGGGTTAACTACCCTTAATTAGCTTGATCAACCTGGATATAAATCCGGTCTCTTAGCTGGGTGATCTTGTTCAGGACCGTGGGGAAATGATCACCATCATCAGCACCTAAATAAAGCTCTGCAAGCCGTGCTACCGCCATCTGGGTATCAACATCAGCAACCCGCAAACTTGATTCGATACAAGTCAACAGATCCATCGCTTCGGTGAGCAACACCTGCTCATCCCGAGGAAAACATAACCGGTCTTCGGTAGTTGTAGGAATAGATATGGTCATGAGAAAAAGTCTCCAATCATCATGGATTAAGTAAAAGGACTTAGCTCATCAAGGCATGCTTGACGCGGTAGGATTCTCCACTAAAGTGCAGCAACCTCCCGTGATGGACAATCCGGTCAATCAC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCTCAGGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.60,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //