Array 1 92402-90862 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRVL01000003.1 Campylobacter fetus subsp. venerealis cfvi92/203 14545C00003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 92401 30 100.0 36 .............................. CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACT 92335 30 100.0 36 .............................. TATAAAGGGACCTACGAACTAAGCTAGAACCCTTTT 92269 30 100.0 36 .............................. GTGTAAGCAAGATGGCAAGAGACTATCTCCTGTTGT 92203 30 100.0 35 .............................. CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT 92138 30 100.0 36 .............................. TGGGGATTCGATGAAATTTTTAACTATATAGCATTC 92072 30 100.0 35 .............................. TTTTATAAGGCTCATTTTTGAAGATATTATGCTGC 92007 30 100.0 37 .............................. TCCAGAGCTAATAAGGGATTTAGAGCAGCTAAAAACT 91940 30 100.0 36 .............................. CGCAAAAAGAGTTGAAATATATAGATAATAGGTTAA 91874 30 100.0 35 .............................. AATCCAACTTAACAAAAATGTTATATAAAATCACC 91809 30 100.0 36 .............................. TAAACTATTTCGTTATCCTGGTTGATACCGCTTAAA 91743 30 100.0 36 .............................. ATGAGTTTAAATTTGATAGATCTGAAAAGATTATTC 91677 30 100.0 35 .............................. CTTGATACTTTTTGCTTGATTAGCTTTGCATTTTA 91612 30 100.0 36 .............................. TCCCCGTTATCTACCTCTGGCGCCATGCTCTCTCCG 91546 30 100.0 35 .............................. CCTTCTGCGATATATTTGATGAAAAAACAGAAAGG 91481 30 100.0 36 .............................. TTTGAAGTGCACGACGCTATAACTAGAACACGGATC 91415 30 100.0 35 .............................. ATTAAAGCCGAATTACTCCCATTTTTTTGACTTGG 91350 30 100.0 36 .............................. TACATCTTTTATCTCCTCTTTGTATTCCTTTAGCTC 91284 30 100.0 36 .............................. TGTATGTTGGTAGCTTTTATGGTTACTTTACATAAC 91218 30 100.0 34 .............................. TCACCAAAAAACCAGGAATTAAATAAAAGTAAAA 91154 30 100.0 35 .............................. AATCCAACTTAACAAAAATGTTATATAAAATCACC 91089 30 100.0 36 .............................. TAAGCAAGGCTTATAAGCTCTTTACAATGCATTTTT 91023 30 100.0 36 .............................. AGAACTGTTTTAACCTCACTTCCATCAATCTCTTTT 90957 30 96.7 36 .........................T.... CAGTATGCCATTTGATTCTAGTTCGCCTATAGCTCT 90891 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 99.9 36 GTTTGCTAATGACAATGTTTGTGTTGAAAC # Left flank : AATATAATTTTTTGTATAATCCAACTTCTATTTTATAGTTATTTATTACTCTAAGCCTAAATGGTGAAATTGGTAGACACGCTAGACTCAAAATCTGGTACGGGAAACCGTGTGTCGGTTCGAGTCCGACTTTGGGCACCAGGGGTTTTGTATATAACCCAACTCAATTTTAATGTTAGTTTTAATTTATAGCAATAATAATATTTATATACCACTAACTACAAATTTATATTTTATACTGCATTAAGCTTTTTCCAACCTAATTTTAGTTAAACTTTTAAAAACATAGATAAATAGTTTAAATTTAATGTTCCTATGATATTTAACTTATTATTGTTATTTTTTTAATTTAGATTGGAAAATAAATTTATTCTCATTATTTATAGCTATATTATATATATAACAAATAATCTATTTTTAATAGTTTTAGATAATATCTTTTAATTTATTTTTTATCTTAATTGCTTTTTTAAATTTACTTAGATGATGAGTTTATTATA # Right flank : AAGAGCAAACATGGCAGAGACCTTAAAAGAGAAGTTTAAAGGCGTACTAAGTGCAAATACTAGCTATTTTGAAGGAGTGAGCGACCACATTATAAGTCAGGCTCAAAACATAGCTAGAGTAAATCAGTCTAGTAAATACGGAGTAAAGCATTACAAAGTATTAGCTAGGATAGATAGCCGTACAAGTGATATCTGTAGAAGTATGAACGGACGTATAATCCCTGCTAGCCATATAGAAGCTCAAAGCAACAATATCCAAAACGCTAAAGATATAAACGAGAAAAAAGCAGCTGCTATTTGGAGAAATGAGCCTTTTTTGGGTAAAATACTCCCTAGTAACTTCGGGCTTCCACCATATCATTTTCGTTGTAGAACCGAGCTAGTACCGGTGTGGATAAATGAAGAAGAGATCGATGGAGTAAAGATGAAAAATACAAGCCCGCTTAGCAAAGATGAAGTAGTAAAGCATATAGATAAAACTGGGGTTGAGAGATATGCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATGTTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //