Array 1 133750-126521 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828542.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 133749 28 100.0 32 ............................ CGCACAGCTTGAAATTTACTTTGAACCCGAAA 133689 28 100.0 32 ............................ TGAAAAGAGCAGGCTCCTTACCCATTTCAAAA 133629 28 100.0 32 ............................ ATAATCGCCTCCACATCCTGCCATGTCAATTT 133569 28 100.0 32 ............................ GTACATATAACCCCGATGCCAGGGAGATCATA 133509 28 100.0 32 ............................ ACATAATTATTACAAAAAAATTATGAGGCTTC 133449 28 100.0 32 ............................ ACAGCAGGGGATGATTGACTATAACTACAAAA 133389 28 100.0 32 ............................ AACACTGCCCCGACACTATCCAGCACTGCTCC 133329 28 100.0 32 ............................ TATCTTCATAGCGGTACAGATGAGGAATATGC 133269 28 100.0 32 ............................ ATCAGACCCGCCGCCTGTAATAGCACCTTTAC 133209 28 100.0 32 ............................ TGTCAAAAACAGGCTTGAGTGTTTCAGAGTCA 133149 28 100.0 32 ............................ AGATAGACACCACAGGCATTGAGCCGGCCTTG 133089 28 100.0 32 ............................ AGGCATCCATAGACACTGTTAAACAAGAGCTT 133029 28 100.0 32 ............................ ATACGGAAAGACATCAGGCATCACCTGGAATA 132969 28 100.0 32 ............................ ACAGTTGACGGCATTGAGTATGAGTTCATGGA 132909 28 100.0 32 ............................ AAAACAGCATCAATGACAATCTCAGAAGATGA 132849 28 100.0 31 ............................ AAAATAATTGGATTTAAAAGCAATCCTAAAC 132790 28 100.0 32 ............................ TGGTTGGATGTTGAAATATTGAGACTCACCAG 132730 28 100.0 32 ............................ TCTATGATGACACAGATATTTTGCCGCTTGAT 132670 28 100.0 32 ............................ ATCGAATGAGAGAAGAGTGTGTTCTCCAGGTG 132610 28 100.0 32 ............................ TCTTGAGTCATATCAGATGACCATAGGCAATA 132550 28 100.0 32 ............................ TATATCACATGGGTTTTCGAACGAAAAAATTA 132490 28 100.0 32 ............................ AAGCTGTTGCTATTCTCCGTGATATTTTCCCA 132430 28 100.0 32 ............................ CAAGTATTTTCCTGTAATTCCGAGATTATCAA 132370 28 100.0 32 ............................ GGCATCAAGAGAAATTATTGTTTGTGCAATTC 132310 28 100.0 32 ............................ TGGGACAAATCAGGCATCAATCAGTATTTCAC 132250 28 100.0 32 ............................ AGCCTGGGGACAACCAACGTGGTATCCTGAAA 132190 28 100.0 32 ............................ ATCAGGCAAACCACTCCCTGGAGGATTGCAGA 132130 28 100.0 32 ............................ AGAATGAAAAATTATGAAAACGCTATGTGGAT 132070 28 100.0 31 ............................ AGGTGGGGAGTGAATCTCTTCAGGCCGGTTG 132011 28 100.0 32 ............................ TCCTGGAATTCCTCGTCTATCTTTTCAATTAA 131951 28 100.0 32 ............................ ACAAATAAAAATTGTAATAAATACCGGCTGCT 131891 28 100.0 32 ............................ ATTGAGAAAGCAAAAAAGATACTATCAAAGGA 131831 28 100.0 32 ............................ ATATAGTCAAAGCCATGTTGGATACAATGGAA 131771 28 100.0 32 ............................ ACAGGTATCCAAAAGGGACAGGATTCCGCTTT 131711 28 100.0 32 ............................ ACAATGTCTGCAAACATACCAAATATCCACAA 131651 28 100.0 32 ............................ TTTCCGGCATCTTTGCCCGTATGCCGAAACTT 131591 28 100.0 32 ............................ TTGGTTGCACAAGAGCGAAAATGGGATTGCAA 131531 28 100.0 32 ............................ TTAAACCATTTATAATCAAGCGTATAACCAAA 131471 28 100.0 32 ............................ TGCTACAGGACATAGAAATTTTAATACAATCA 131411 28 100.0 32 ............................ AGCTTGTATCCTGGCGCTCACATAGTGCTCTG 131351 28 100.0 32 ............................ TTTCCGATGAGTTCGAGGGGGACTATCTCACA 131291 28 100.0 32 ............................ ATACATCGTAACCGTTTATTTTGCTTCTCAAA 131231 28 100.0 32 ............................ ATATGTTCCCCTGGGAGACATTGCCCATTTCA 131171 28 100.0 32 ............................ TTATAATTTCTATTGTCAATAATCTTGACAAT 131111 28 100.0 32 ............................ CTCACCCACGCCCGTGTGGGGCAGACGTGTGG 131051 28 100.0 32 ............................ TTCCGGTAAGCCTCTCCCCGGTGGCTTGCAGA 130991 28 100.0 32 ............................ ATCAATCAGAACTGACTCAAGGCCAATGAGCA 130931 28 100.0 32 ............................ TGTGTGAAAACAGCATTGATGAAAGGATTATG 130871 28 100.0 32 ............................ ATCGAAGAAATAACCACTATTCAGATTGAATC 130811 28 100.0 32 ............................ ATCAGCCCATACTCCATAATCCGCTGATCCGG 130751 28 100.0 33 ............................ GAACCTGGCATCAATACCCACATTTTTTCGTTG 130690 28 100.0 32 ............................ ATATGTTCCCCTGGGAGACATTGCCCATTTCA 130630 28 100.0 32 ............................ AGAAGTATGTCTCTTCAGTCATTGACATTTCA 130570 28 100.0 32 ............................ AAATGCATCTGTACGTTTTTTGAAAAGATCAC 130510 28 100.0 32 ............................ ATTGCCAGGCAAGATCAGGATAATGAAACCGA 130450 28 100.0 32 ............................ ATTTATAATCAAGATTGTAACTGAAATACATT 130390 28 100.0 32 ............................ TCACTTGTATATATACGGTTAATATTAACGCT 130330 28 100.0 32 ............................ AGTGTTCAACTCGTTCCGGCTTCTGTCTCTCC 130270 28 100.0 32 ............................ AGCAGGGATTATAAGGCCATACATTAGGGTTA 130210 28 100.0 32 ............................ TCTAATGTCGGAGTTGAATTGATGTAAATTTT 130150 28 100.0 32 ............................ CAATAGTTTTTGGCTTTGTTGTAGGTTGGCAT 130090 28 100.0 32 ............................ TCCGCAAAATTGACACACATACCAAACGTCAA 130030 28 100.0 33 ............................ CTGTCGGGTTGACAGCCGATAAGAAGGGGCACA 129969 28 100.0 32 ............................ TATGAAGAGAAAAAAGGCGAGTTGATATCTAA 129909 28 100.0 32 ............................ ACATATTTGTTTGTTCTATGCGCTGTGTCTAA 129849 28 100.0 33 ............................ CTTAATTTTTCCGCCTTGCTTCTATAAATGGAA 129788 28 100.0 32 ............................ TTGGTATATCTCACTAAAATCAAGGTTGGCGG 129728 28 100.0 32 ............................ TGCGGCACAGCATAAGGCCGGATGGAATACAT 129668 28 100.0 32 ............................ CTGTTGACGGTTCAAACAGGCGGTTAAAAATT 129608 28 100.0 32 ............................ TTGTTATGATCTCAAGGGAGCCCTGGCCCCTT 129548 28 100.0 32 ............................ TGTTCTGCTTCAGCTTGTGCCTTTGCCTGGTG 129488 28 100.0 32 ............................ ATTGATGACGCCATGTAACTCGATTTAAGCAC 129428 28 100.0 32 ............................ AATGTCATTTTAACTCTGAATATCCGATCAAC 129368 28 100.0 32 ............................ ATGAAAGTTGATGGAAGATGACCTTTAAGGTC 129308 28 100.0 32 ............................ GGATTATTAAGGCTCCAAAGTCGAGAAAGTCA 129248 28 100.0 32 ............................ GTACAGATCAAAAAACATGGCAGCAATAACAA 129188 28 100.0 32 ............................ ATATTCAAACGATGATGAAAGGCATCTTTCAA 129128 28 100.0 32 ............................ TTACAACGTCTGTCCATACGTCTGGATGGTTT 129068 28 100.0 32 ............................ TCGCCGTGAAAATTCAAAAGGAAAAACTATTA 129008 28 100.0 32 ............................ TTTCAAATGACCAGCAGGCGGCGGCGACGGCT 128948 28 100.0 32 ............................ AGGATTTTTAAAAAACCGTGTCGATTTCATGA 128888 28 100.0 32 ............................ TACAATATCAATTGCAGAGACATCAAGAGTGA 128828 28 100.0 31 ............................ GCTACACAAAGAGCGGATTCAAGACAAAAAA 128769 28 100.0 32 ............................ TTGACTACCCAGATAATTTGACGGTATTTTTG 128709 28 100.0 32 ............................ TGTTGTCATTGAGCAGGGCAGATGGTTAGCTC 128649 28 100.0 32 ............................ TTTAATTCATAAGCGTTACAAACAGCATTGTC 128589 28 100.0 32 ............................ ACGCATCAACATTATTGTGACAATGTATCAAT 128529 28 100.0 32 ............................ AATGGTAAAACATAAATACTTAATGCCATTAA 128469 28 100.0 32 ............................ TCTGTGCTGCCCGTACTCCGTCTGTGTCATGT 128409 28 100.0 32 ............................ TGTATACCCCTGCCGTTTTTTGGCTTTCAATT 128349 28 100.0 32 ............................ TATAAAGAATATGCCCTGAAGCTGTTTAATCT 128289 28 100.0 32 ............................ TACCTGAAGACTCCAAAGAAACGGAGTCGAAA 128229 28 100.0 32 ............................ ATGCCAGTCTTGACGATCTGCTTAAACGTCTC 128169 28 100.0 32 ............................ ATTAAATGATAAACTTGCTTTTGTGTTTGCAA 128109 28 100.0 32 ............................ ACAAAAATACTCCCAATGATCATACCAACAAC 128049 28 100.0 32 ............................ CTGGTGATAACTATCTCCCTGCAACTCTCAAT 127989 28 100.0 32 ............................ AAAAAGAGAAGGCATTTACCTTGTAACTATAT 127929 28 100.0 32 ............................ TTCCGCAACACCGGAGTTTACTTATCCCTTTT 127869 28 100.0 32 ............................ TTGCTGCACTTAGGAGAATGGGATATTCAAAA 127809 28 100.0 32 ............................ CTGTCCACATTCCGCTGCTCTCTCAATGCCAG 127749 28 100.0 32 ............................ ATTGTAAGAAGCAAATACAAACGCTAATTTGT 127689 28 100.0 32 ............................ ATGCACCTATTGAGAAAAAACGGGCAGAATCT 127629 28 100.0 32 ............................ ATAATCTCCATCTCACGCCCATATAGTCCTCT 127569 28 100.0 32 ............................ AAGTGGGTAACATGTCCTCATTGTGGTGAAAA 127509 28 100.0 32 ............................ ATCAAAAGTTACATGGTAAATTGCACCACCCT 127449 28 100.0 32 ............................ AGAAGCAGAGCTAAAAAAAACAGGAACACGCC 127389 28 100.0 32 ............................ AGGTGGTTGCTGCATCAATAACAGCCTGCACA 127329 28 100.0 32 ............................ ATGTAGCCGCTTTACTCTCCTACCATTTAAGC 127269 28 100.0 32 ............................ GACAAAATACATGAGACCGGAGCACCGGAAAA 127209 28 100.0 32 ............................ TTGATGCTGTAGGCGCAATCCAGGCAATCCAG 127149 28 100.0 32 ............................ AGGAACTCGCAGCATCAATAACAGCTTGCACA 127089 28 100.0 32 ............................ GTGGAGACTTTTGGGAAGAAACACGGCAAAAA 127029 28 100.0 32 ............................ ATGTAACTTAATTTAAGCACAAAAACACAACA 126969 28 100.0 32 ............................ ACAGGCACATTTTCATTGTCGTTCACAGCATC 126909 28 100.0 32 ............................ TTGAAATCATGCCTCATGTTGTCAATTTACCC 126849 28 100.0 32 ............................ AACACAGCAACAGTTGAAGTTGGTGACACAAT 126789 28 100.0 32 ............................ GGCGTGAACTCGAGGCAAGCGTTGGTGTATTT 126729 28 100.0 32 ............................ AAGAGCATGGAGTATATGCAAAGGCTCATCAT 126669 28 100.0 33 ............................ TTATGTGTGTCTGGTACTGACATAGTACCGTTG 126608 28 100.0 32 ............................ CTTGCCAATAACACGTATATTCTGCTCTGTGG 126548 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 121 28 100.0 32 GTAAACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTTTAGAGCGCATTCAAATAATAAACTGGTTACAGGGACTTCAAGATTATATTAATATGTCGGACATTCTCAGGGTACCTGCCCTTACCAACTTTCGTATTGTGAAACGTATTCAAACTAAAAGCAGTATAGAGCGTTTGTACAGACGATCAATAAAAAAAGGATGGATAACTTCGGAAGAAGCCGAGAAAAGAATTCGAGAGCAGAAAGTTCAACGACTCAAATCCCCTTATGTACAAATTAAGAGTCTTTCAACGGGTCAATATTTCCCTTTATTCATAAATCATGGTGAAATTTTGAAATCGTCTGTGAGAGGTGAATTCTCTGCATATGGCCTAAGTGTTGCCAATGCTACCATTCCATGGTTTTGACCTTTTTTTTCGTTTTTTTATAACATGTTAATTTTTAAGTTTTTTTTAGAACCAGCGCTAAAAAGGGTTTATCTTATATTTTGTTAAAATATTGATTTTAAATCAATACCTTGGGATAGGAGTGGTGCA # Right flank : AGGTCAATACATGCCTGTCTGTATGATACACCGTAAACTGCCGCACAGGTGATAGTTATCTCGATATTTGATGGAAGTCTGCTTTATTTTTTTGCAATCTATTTTATGGAAAATCTTTAGACACCCTGTCGTTCCTAACTTTTCATTATACTTTAGGGGTGTTCACTCCTTCACCAATTAACTTGAAAGAATCCATGATAAATGAGGGATAAGTTTGCTAAATTGATTTTAGTTACAGATAGAGGTAAAATTCTTAGAACGCATTTCCATGCCCTTGGGTATAGTGTGAATTTGTTGATTTGAGATATTTTTGTTAACTTTCCCATCTACACCCTGGGGGGAGTGTATCTATCCTTCTGTAATTAAAATAATTAAGTTTTCACCCTGATTTTCATTAAAATACACCTTTTAAGAAAAGTCCAGGTGCTTTGAGGCAAAAAGGTCAGGAAGCTGCTGCAATTTTTACATTTTGGTGGTCATCAAGGATTGGATATCTTTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4059-5219 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828581.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 4059 36 100.0 38 .................................... TAAGCAGTTTAAACGGATTTCCGTTTTTATCCTGCTTT 4133 36 100.0 35 .................................... AAAAACCCAAAACCAAAATAAAAAAAGGCATATAA 4204 36 100.0 40 .................................... TTTTGTAACACCTGATTGAATGATTGCAGCCATACATTGA 4280 36 100.0 38 .................................... TTTCCAGGTGTTCCAGAACTGCTTGTTATTCTTAGACT 4354 36 100.0 43 .................................... TAAAGGTTCAAGCATAACCTTTTTAATAGTGATCAGGACTTAA 4433 36 100.0 38 .................................... CTTGTACGCCCCTTATAGTCACTGGTGCTGGCGATGCA 4507 36 100.0 44 .................................... CTTTTTAAAGGTTCAAGCATAACCTTATGATTTATTTTGATCAG 4587 36 100.0 37 .................................... TAAAACCAGACCCGATACGATGTAGCGGGCACCTTCG 4660 36 100.0 38 .................................... TTGAAGGAGATTCCAGATCGCCACCACGACCTCGATAG 4734 36 100.0 39 .................................... ATAGTGATCAGGACTTAATGGGCGTGCCTGATCGGTCTT 4809 36 100.0 39 .................................... TTCGGCTGCTGATGCCGAGTGATTTACCGCCTCACTTCG 4884 36 100.0 37 .................................... ATCTTCGAGAAGAAGAAGATGTGGGCAATCTTCTTCT 4957 36 100.0 37 .................................... CAGGTCGTCTCTATCGGACGAAACAAGGGACAGACAC 5030 36 100.0 38 .................................... CGGGGTAATTCATGCTAAAGACGCACTGATAGCATGAA 5104 36 100.0 44 .................................... GATGCGATTGACCAATCTTTCAGCCAATTCGCACGCCAGTCAGA 5184 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 16 36 100.0 39 GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Left flank : GATGAAGAAGATATGAAAAAAAAACGTCCGGTTGAAATGAAACCATATCTATGTCGGGCTTTTATAACCTCATATGAAAAAATGATGACACATGGCTCTCCATCATATAGAAATCTGATCCGCAGTCAGGTGCGTCAGTTTTCAGATTATCTGCTGGAGCCTAAAAAAGGTTACAAAACTATATGTGTATAAAATATTTATTGTCTTAACCTACTAAATTTATTGTTCTTTGACAATTTGCGACTAAATATTTTTTCACTCCTACAGGGTACAAAGTATTCTCCATTTGCTGTCCATTCTTTTTTCTAATAATTCAAGACAGTTACCTGCCAAAGTTACCGTTTTATGTGTGAAAAAAATTTATTTATAATGATTTCAGTTATTTAAAAATTTTTTTTACATTTAATTCGTTGACTTTTTTTACCGACATCCCAAAACAGAGGAGGTGTGAAAAATCGCCTTGACAGAGCCGCGCCAGTCCTGTAAAAAAAACACCTAGA # Right flank : CATTTCAAGTGCTCGAAGATAATGACAATCTTCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 4-636 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828631.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 4 36 100.0 38 .................................... TCGGTAAGATCGTCAATAGGTACGATCTCACCTTTCTC 78 36 100.0 38 .................................... AAACAGGCTCAAAAAAAACATCTAAAACATAAGGTCTC 152 36 100.0 43 .................................... ATAATATCACTACATGTGAAGTGTTAATAAATGATAACCTTTT 231 36 100.0 41 .................................... TTTGCAGCTTCTAAAAAAATAAACAGATGGGTTGCTGATAA 308 36 100.0 35 .................................... TCATAATTCTAAGATGTACGGGTGTTCCTGTTCCT 379 36 100.0 38 .................................... TTCTTTTATTTTTTCCAGGAATCTTTTATAAGCTGGTG 453 36 100.0 39 .................................... TTTATTTTTCATATTTAATCTCCGCAGTACAACAAGTCA 528 36 100.0 37 .................................... CCTCTTTCATTTCAGAAAATGAGTTGATTTCAAATCC 601 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 9 36 100.0 39 GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Left flank : ATTG # Right flank : TCACCACTACCGTTCAAACTCAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 587-17 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828633.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 586 36 100.0 37 .................................... GTAGTCTCGTTGATCTTTTCGAACGTTTCTTCGGTGA 513 36 100.0 40 .................................... TTGAGTGGCATAACGACACATGCCACATCACATTTTTCGT 437 36 100.0 40 .................................... TTTTTGATCATTTCCATCATATGTATTACTGTCACCATCG 361 36 100.0 42 .................................... AGACACTGAACCTCACCGAAGTTCTGCACACATACATCGTCT 283 36 100.0 41 .................................... TTGGTGGTCTTCTCAAAGTCTTCAAGCAAGAAAGCCACCAT 206 36 100.0 40 .................................... TTGCATGGAAGACAGAGACAACCAGGACGTTGCCCTTTTG 130 36 100.0 41 .................................... TCAGGTGCTCAATTTTAAAAATGTAATACAATTTGCTTCTC 53 36 100.0 0 .................................... | G [25] ========== ====== ====== ====== ==================================== ========================================== ================== 8 36 100.0 40 GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Left flank : ATTAGAGGGGATTGAGACTTATAGAAAATGAATGGATTGAATACAATAAAGTTCCA # Right flank : CCCACCTCTTTAAACCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 1 42-605 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828637.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 42 36 100.0 38 .................................... TCTCTGCACAAGAAGACCCTATCATTACGTCAAAAAAG C,G [55,67] 118 36 100.0 39 .................................... CAAGCGCAGATTGCGGATAAACCATATCTTCTTGCGTAA 193 36 100.0 38 .................................... CTGGCACGCTGTAGTCTTTCCAACACACCATGAAAATG 267 36 100.0 40 .................................... GCAAAGACCATCATGATCGCTGATTTTTCATATTTTACGC 343 36 100.0 39 .................................... TCTGCCTCATTTATCTCCAGGTTTCTATAATCCAAGTTA 418 36 100.0 40 .................................... ATATATTGCTTGATTGCCTCAAGTTGATCTTTTGACAAAT 494 36 100.0 40 .................................... AAAGCATCTTGGGTCTCATTTTTACGATGACCAGTGGCAG 570 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 8 36 100.0 39 GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Left flank : ACGAAACGATGTACCTAACACCGTCTTCAGGAGCAGGTAGAG # Right flank : TCAAATGTCTTTATCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 566-72 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828639.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 565 36 100.0 40 .................................... GCAGGGGGTGTTCTTCTTGCACCTATCCCTGTATAAATCA 489 36 100.0 42 .................................... ATATTCTGCACCAGCTCCTTTTGAGTTGAAGGATGCGGTTAA 411 36 100.0 43 .................................... TTCTGCTTCGAGGGCTGTAATTGTGTTTTCAGCGTTGCTGATG 332 36 100.0 42 .................................... ATGGCCCAACACCCCCATTTTCTGTGCTATCGCATACATTAG 254 36 100.0 36 .................................... CATAAATACCTCCTTATATGTCAAAAACGTTATCAG 182 36 100.0 39 .................................... TTAAAAATTCAGTTTTGTAAAATACATAAAAACACCCTT 107 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 7 36 100.0 40 GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Left flank : TTTTTTGTCACTTGAGAGTTTTGCGTG # Right flank : CTATGTGCTTTTGAAGAAAGGGTTCTTGCTCCCTTTTGTTGTCAGAAACACTGCCCCGATTAGAGGGGATTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA // Array 1 240357-239173 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828548.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 240356 36 100.0 40 .................................... CATCTCCGTCATATATGAGCCAGTCTTTTATATAATGGGG 240280 36 100.0 43 .................................... CTGGCAAAGAGATGAGACTTTCAATCTGACTTTCAATATTTGA C [240267] 240200 36 100.0 41 .................................... TGGAATACCTTCTGCCCTGCTGCATTCAACTTTTGCACAGA 240123 36 100.0 40 .................................... TTATCCCTACCTCCAGCCAGCCGAGCGGGATGAATTTCGG 240047 36 100.0 39 .................................... CAGCAGTCAATGTCTTCCCTATTGAAGGAAGACATTTTG 239972 36 100.0 43 .................................... TCTCGTCCCATTGCGCGAGGAAGAAGCATCAATCTCTCCTTGC 239893 36 100.0 41 .................................... CATCAAAGCATCCCACAGTGGCTGACCATGCCACGCGTTAT 239816 36 100.0 40 .................................... TCCTCTCGGTATTTTTTGTGAAAAATTCATGTTTTTTTTC 239740 36 100.0 38 .................................... TCTATATTTAGAATCTCAGCACATTCATTCAATGTCTT 239666 36 100.0 42 .................................... ATTAGAATTGACGATCTGCGATAGCGGCAGAAGTGAACAAAC 239588 36 100.0 44 .................................... TATATCTCTCACGATACAGAACGTATCCTGAGGGAGAAACTCCG 239508 36 100.0 40 .................................... TAGCCCCATCTATACTATGCAATCTCAAATAAGTATGACA 239432 36 100.0 39 .................................... TTGAAAGTCATTTCCCTGTCTCCTTTATTGTTTAGTTAT 239357 36 100.0 40 .................................... TATGCCTTTTTTGACTTTTATTTTAGAAACGATCATATGC 239281 36 100.0 37 .................................... TTTGATCAATCTGTTCAATTATTCGATCCTCTCTTCT 239208 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 16 36 100.0 41 GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Left flank : CGATTAGAGGGGATTGAGACCATTTGCCACCATTTTGGTGGCTGCCTCTATGGAACAGTGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACAGGCCACAAACAACCCATCCCCAAGATCAACTCTTGGGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACCATCCGCCTCTCATACTCCTCACCAGAACTCATAATTTGTGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACGTCATCTTTTTTAAAACTCATAATGTAATAGCCTTCAGATAGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACTTATCATTATTAGACTGGCAAGAATGACAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGACAAAATCTCCTTTACCTGTATGCTGACACATTTATTTACATTG # Right flank : ATTGAAAGAATTCCCTTTGCAGTCACATCGTGTCTCGTCAGAAACACTGCCCCCTATAGTGCTCAGCAAAACTGATACACCTTTGCTCACATAAATTGATACAGTGCTGATTTTAAAAGGCATTCCGAGCTTTTTATTGACAAAATGCTGAACCTATTAAATAGGGTAGAGCAGTTGAACTGCTTAGACACCTATGATCTTGTAAGCCTTGTCAATACTGTCTGAATCAGGATTCCCAAGATTAACAGGATAAGGCAGGATTATCTATCCTGAGTATCCTATCCATCCTGGTTATCCTGGTTCAGACAACTGCAATAAATTCCATCCGGAATTTGCTGAAATTATGCGTGGTCTGCATTAATTTAAAAAAAATATAAAAAATTCACATCTAATTCCCTTTATATATACAGAGGGCTTTCAACTGTTGCAGTTTCCCTCTGCAAATATTGTCAAAAAGACTTAACTTCAGTCTGCAAAAAAGGGAGGAGATGCCATGCCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 2 244414-242436 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT828548.1 Desulfamplus magnetovallimortis isolate PRJEB14757, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 244413 36 100.0 42 .................................... TCACCACTACCGTTCAAACTCATGATTTCCCAGATTTTGTTC 244335 36 100.0 35 .................................... TCCAAGAATTAATGTTACGAGCAATCAATGGTCTT 244264 36 100.0 40 .................................... TTGCTCTGGCCTTTGTACTCATCACGCATATTAATAATAC 244188 36 100.0 35 .................................... TTAAATCCCTTTCAGAGTTTGTTGGATATAGTTGA 244117 36 100.0 40 .................................... TAGCTCCGTTTGCAGCTTGTTTCAATTTTTCTGTTGCAAG 244041 36 100.0 36 .................................... ATATCCGGTGACAGCATTCCTCCTGTTCTCTTCGAT 243969 36 100.0 39 .................................... ATGAAATATCAAATGTTTCGTGATTTATGACATGAGTGA 243894 36 100.0 38 .................................... GTACTCACATTGCAATCAAGAATGGACTGAAGAGTTGG 243820 36 100.0 39 .................................... TATTTCATAGCTATGAGAGTCCATGTAATGAATCATTAC 243745 36 100.0 37 .................................... TCGAAGATAATGACAATCTTCGATTGAACCGCCGAAA 243672 36 100.0 34 .................................... TTAGAGGTTCAGCAACTGAGTTTCCTCAGCTGCT 243602 36 100.0 44 .................................... TTTTTCGAGTTGTTCGAGTCTTTCCCCACCGTAATGTGGGTTTT 243522 36 100.0 42 .................................... TCACGAACCTTCTCTCCGATGTATTTAGCCTGTTGCATATTT 243444 36 100.0 37 .................................... TCATGGGACTTTATAAATCTTTCCATACCTCTTCTAC 243371 36 100.0 42 .................................... TTGTACAGGCACTATCAGTGCCTGTACAGAGGTCTGCATCAA 243293 36 100.0 41 .................................... CGATCCATATAATTAATCACTACTCTCTGGCCTCTTCTGAC 243216 36 100.0 38 .................................... CTGGTTTCCTGGTTTCACCTGGTTCCTGGTTTCCTGGT 243142 36 100.0 37 .................................... TTTGATAACTATTATTGGTGGTCTGCATCTGATAAAT 243069 36 100.0 35 .................................... GTAAGTGAATCTTCATTTTTAATGGTAATAAAATT 242998 36 100.0 38 .................................... TGATGCCCTCTTTTCCGTCAGGGCACTCAAACCAATTA 242924 36 100.0 44 .................................... TTTGTTCGATGAGGCCAGTGGCCTCGTCTACTTTCTCGAACATC 242844 36 100.0 37 .................................... GGTTTCCCTGGTTCCTGGTTCCTGGTTTCCTGGTTCC 242771 36 100.0 42 .................................... AAAAAGAGATGATTAATCGCACCTCCAAGATTTCACGCACAT 242693 36 100.0 38 .................................... TTAACTGCACTGCTTTTTAAGGGTCAAGCATAACCTTA 242619 36 100.0 38 .................................... TATCAAAAGGTTTACTGCACTGCTTTTTAAAGGTTCAA 242545 36 100.0 38 .................................... CCACCTCTTTAAACCCAGTCCTTGCCTTGAGATTTCGA 242471 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 27 36 100.0 39 GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Left flank : | # Right flank : GTTAATATTCACATCAACTGGACTATCTTGGTCTCTGTGAGTCAGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACCCACCTCTTTAAACCCAGTCCTTGCCTTGAGATTTCGAGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACACATTGTCTATCAGGCCATGGGTTCCAGCTTGATGCTGGGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACATATCATAATGTTCGGCAATTATTGGTCTATAATAGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACTTTGTTCATCTTCTTGATAGTCATGGTTTAAGATTTCTAACATGTCAGAAACACTGCCCCGATTAGAGGGGATTGAGACTAGGTGCTACAAAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAACACTGCCCCGATTAGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA //