Array 1 397-42 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWS01000026.1 Bacteroides propionicifaciens DSM 19291 = JCM 14649 strain DSM 19291 B091DRAFT_scaffold_25.26_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 396 47 100.0 30 ............................................... AAAAAAGGGAGTAGGGTTTGATGCCCACTC 319 47 100.0 30 ............................................... AGCATATCAATGAACTCACTGTACACACCA 242 47 100.0 30 ............................................... CAGCGGTTTAGGTAGAACGGAAGAGTATGA 165 47 100.0 30 ............................................... TATCAAGCTTGCAAGACCAAGCAGGCAAAG 88 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 100.0 30 GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC # Left flank : TATACAGAACTTTCACTTTACGTCCACAATCAGAAATGACTTTAAGCTTTAGTCAATCAGATACTTTTAAGCTTAAAATTAAAGCTGTGCACAATGATAGACCCTCTTATCATGATGGAGGGTAATTTTCTGTAACTCGAACACGATCAGAATGGTCTGAAGGAGAAATATCATTTAGACTATCTACATACGGTTCAGGACTTGGCCCGTCAATCTCGCAAGAAGAGTTTAATAGCAACCAATAACTTTAAGAAAATATTAAACTTATCTATCTGTGAAATAAGATAGATAAAAACAGGATGCTAAAGGCAAACTACAAGTATCCCAAAAGATAAAAGGAGATTGGATAGTACCAATCTCCTTTATATATTCTTTAGCACCCGAATTAAAGACTTAGTGCTAAATTACCCCGTTTTTTGCCCCACCTATTTACAATGAGTTTGATATTGTGATAGTTACATGCTTAAACCTATCCTTATTGTGAATGTATGCAGTGCCTC # Right flank : CTCTATTTTTGTTAAAAGTGAACTTTGCGAAGTTGTGAATTG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 66-1592 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWS01000043.1 Bacteroides propionicifaciens DSM 19291 = JCM 14649 strain DSM 19291 B091DRAFT_scaffold_42.43_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ================================================= ================== 66 47 100.0 30 ............................................... CTTTTTTCCTTGTTGAATTTTTCACCCTTA 143 47 100.0 29 ............................................... TTAATATTCAAATATACAATTACTATTTC 219 47 100.0 30 ............................................... TAAATAAGCTTGCGAATTCAACCGCTGATA 296 47 100.0 30 ............................................... GCTCCAGGTTATGGGGTTGATCTTGTTTTA 373 47 100.0 30 ............................................... CCATACTTATAAAGACTAATTCGCCAGCCT 450 47 100.0 30 ............................................... GGACACTACCGCAATTAAACAGGTAAAAGC 527 47 100.0 30 ............................................... GCCACCAACACGGCAAACAATAATAATCAA 604 47 100.0 30 ............................................... CTTTATTGAGAACGAACCAGAGCTTACGGA 681 47 100.0 30 ............................................... CTAGTATTTCAAAGTCGTAAAACACACTAT 758 47 100.0 49 ............................................... CTCCATGAGTTTTTCAAAGCATTTACCCGAGTTGTGAATTGCTTTNTAT 854 47 100.0 30 ............................................... CTCCATGAGTTTTTCAAAGCATTTACCCGA 931 47 100.0 29 ............................................... CCTGAATCTATAAAAGAAAATATGTATAT 1007 47 100.0 30 ............................................... CTCCATGAGTTTTTCAAAGCATTTACCCGA 1084 47 100.0 29 ............................................... CCTGAATCTATAAAAGAAAATATGTATAT 1160 47 100.0 30 ............................................... AAATAACAAAGGTAGAAGACTAACTTATAT 1237 47 100.0 30 ............................................... GGTCTGGAATGATGGTAAAAACATCACCGA 1314 47 100.0 30 ............................................... TATCACTATCTTCTAGTGATTCAGAAACTA 1391 47 100.0 31 ............................................... ATCACTGGGGTTGCAATTACCCATCAGCCTA 1469 47 100.0 30 ............................................... TCTATATGGTTACCATCTTGAATAACATAA 1546 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ================================================= ================== 20 47 100.0 31 GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC # Left flank : TTTCAAAATGAGGTATCTTTGATATCAGTAACAACTACAGAGCTCCAGAGTCGTGGGGTCCACCAG # Right flank : CTGACCCTCAGCATAGTCCTGACAGTCAGTTAGTAACAATGATTTTACGCCAAAATAAAATTGGGGTAAAATCAAAAAACCAGCCACGGTATAGGCTGGTTTTTTGTTTCTAATAAGGTCTTTTTCACCCAATTATTGATCGATAAATTGTTTAGACCACTCTTCAAAAATTAAGCTTTACTCCAATTAATAGAAAGACTATCTTATCAGTTTTCCATCAGAACTTGTAGGTCTTAAGGATTCATAAAACTCTTTTTTAGGATAATCAGGCTATTGTAGCAACATTAATTAAATTATTCAACATTAAAGACCGATATAGGAGCATTTATATGCTAGTAAACTATTGGAATTAAACTTTATATTGCTTATCTTGTAGAGTAAATATATTTAATTATTCTACTTATGATTATAGCAAAATCAACACCTAGTAAAGTTTATAAGACAGCTCAAACTTTATCGTGTATATTAAGTTTGGTTTTGCTGATAATACTCGCAGTCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATGAGGTATCTTTGATATCAGTAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //