Array 1 795764-797434 **** Predicted by CRISPRDetect 2.4 *** >NC_017583.1 Spirochaeta thermophila DSM 6578, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 795764 37 100.0 35 ..................................... ATATAACCCCCCAAAGGGGTTCTTGGCGCTCATAG 795836 37 100.0 37 ..................................... CGATGAAGTGGTGGATAGGCTGTTGGAATTGTATGAT 795910 37 100.0 38 ..................................... ATGCTTCCTCTGCATGAGATACCGCATCTTTTTTCCAG 795985 37 100.0 36 ..................................... TCTGTATAATCATATCAATACAACCCTCGAGAAATA 796058 37 100.0 38 ..................................... TCTAATAGCGATTACGACTCGCGCGGGGTCTTAATAAG 796133 37 100.0 38 ..................................... TCACATTGTGTTTCCTCGGAGATGACAGTCTGCTCATC 796208 37 100.0 36 ..................................... AGTGCACGTACAAGGTGAGGATTTTGGCGATTTAAA 796281 37 100.0 36 ..................................... CACAGTACGCGTTGATAATGCAGATCTTATATTTGT 796354 37 100.0 39 ..................................... TCCCCCTGGCCCTGGCGGTTTGTCTTGCCGACATGCCCA 796430 37 100.0 38 ..................................... CATGCCTTGGTGATGTGGTGCGTGTGTCGCGGATGGTC 796505 37 100.0 38 ..................................... CCCAACGAGTCCCACCCAGGTGGCATGCTACCCATGTC 796580 37 100.0 37 ..................................... GCAATATACCGAGCGCTCGAACACAAACCAACTCCAG 796654 37 100.0 35 ..................................... TAAAAGCTGTGATGCCAACAGATACATCATTCGTA 796726 37 100.0 37 ..................................... CTGGCTGATAAGCAGCTCGATAAATGCAATAGTAACG 796800 37 100.0 37 ..................................... CTCTACGACGATAGCTGATGTCAGCGCTGCCATCGCC 796874 37 100.0 37 ..................................... TTGGAGGATTAATTACAGGTGCAGCCGGCACTATTGC 796948 37 100.0 37 ..................................... TCAGATCCCACAGAAACATAATACTCTCCTCCTGTAC 797022 37 100.0 39 ..................................... GGCCACGCCCCCGTGAGACGTAGCCCTCTGAGTGATGTA 797098 37 100.0 37 ..................................... TTATAGTAAGGTTGTATATGGTATGGTGCCTCATCGG 797172 37 100.0 37 ..................................... ATATCGCATTGTGCCTTTTCAGACACCACCATCTGCT 797246 37 100.0 37 ..................................... ACCCCCAGTCGTCTGCGGCTGCGCCAAACGCTCCAGG 797320 37 100.0 41 ..................................... TCCGATATGATCCGCCGCGTATCGATGCGCCTATCAAGAAT 797398 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 23 37 100.0 37 CTTTCAGTATCCTCTAGCGGATCGTGGGGACTGCAAC # Left flank : ATGCATTCTCATACGCATGGGCGTCTCTCGTATGCCCGGCATACCGGCGAAGAGGCGTCCCCATGGGCCGGGGAAGATGTTCTGGGAGACTCCTCGGTCTTTCCGTCTTCAAACAAAGGGTTTGATGAGGGTGCTCGAAATGGCACGTCCTCTCTCATGGGGCTTCCCCTTATTTTTTCGGTCTACACTTCATCCCCTCTCCTGGTGGGCGCAGGAGAGGAACGCTGCGAGGAAATCTCTCGGCTTCTGAGGTGAGAGGTGATCCCCAACAACAGGGGGAACTGGGGAAAATTTTCCTTGACGTGGGGGAAAGTGATGGTAAAATAGAGGAGTTGCTACGTGTAGAATCAAGGAGGTGGTCTCATGAAAACGAGAAGTGTTGCAGGACACTGTCAAGGTGGAGTGTTGAAATTGAGCTGGAGTTGATAAAGCGTGCGTCTCCCACAGTGAGCTTTTATGTGGATGGCCATCACGAGAAGAGTCGATCCTTCCACTAGAAA # Right flank : CAGCCCCCTCTCCAGTCCCCTGAGCTGAGGTTCTTCCCCAGACACATGTGTATTGTACCATATCTTCGCGAGTTAGCAAAGGGGTTTTTTCATCGTGGTTTTGTCCCCTCAGGTGAGATGCCGCGTGGGTTCGCAAATCGAAATTTGCAAGAAAAACCGGGGGGATTTGCGAACAAGCAGGTTCCCTCTTGCATATCTGGACACCCCCTTTCACTTCCTACACAATGGGAGAGGAGGTTCTCTCATGCTATACACTGTCCTTGGTGCTATCGATGAAAGCGAGATGGGCAAGGCCCTTGTGCACGAGCACATCATGGTGGATTTCTCTCCTGCCGACGAGCAGCACGTCCTCGATGATTCGATGAGAGAAGAGGTGGTGCGGATCATGAGCCCCTACCTTCAAGAGATGAAAGACTTCGGCTTCCGCACCCTCTTCGAGTGCACGCCCCGATTCCTTGGAAGGGATATAGAAACTCTGATCAGCATCTCCCGCGCTACAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGTATCCTCTAGCGGATCGTGGGGACTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 807272-809617 **** Predicted by CRISPRDetect 2.4 *** >NC_017583.1 Spirochaeta thermophila DSM 6578, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 807272 37 100.0 39 ..................................... GATACCAGACGTGCAGGGTGTATGCGTATAACCATCTAC 807348 37 100.0 39 ..................................... TAATGCGGCGTTAAAGTCGGTATTGATGCCGTTCTATCT 807424 37 100.0 36 ..................................... GTCGTGTCGATGGGGCGGTTATCGTGCCCACGGGAA 807497 37 100.0 37 ..................................... TATTCTCATATATCAAACAGTCAATAAAGAAATTCTT 807571 37 100.0 37 ..................................... GACATACCGCGACGATATCAGACTGTACAGGCCGTAT 807645 37 100.0 37 ..................................... TATTCATCACTTCGACCCATCCTTCGCCCGGATGTGT 807719 37 100.0 37 ..................................... CTGACGATGACATCGCAGTGGTCTATTACGACGACGA 807793 37 100.0 40 ..................................... AGCTCGATATAAGCCTCGCTATTGCTCAGGCCGCAAAGGC 807870 37 100.0 38 ..................................... AGGCGCTTGGCGTGTACAGCTGCACAGTGTCCATGTCA 807945 37 100.0 37 ..................................... CAAAAGCAGGCAAAAGCAGCAAAAGATCTTTCAAATG 808019 37 100.0 37 ..................................... GTAAGGTAGTGCTCCTCAGCTAGTGCAAGTGCAGGTG 808093 37 100.0 37 ..................................... GAGGGCCACGCTCGCGTGAGGCGTAGCCCTCTGGGTA 808167 37 100.0 36 ..................................... ATGTAGGTGTGTAGCACCTGCTATATCACTGTATCA 808240 37 100.0 37 ..................................... ATAGATGCGATACTAGACATCGCGGGAGTTACCAGCC 808314 37 100.0 38 ..................................... GATGATGGAGGCTGCATGGTAATCAAACTTATTTGTGG 808389 37 100.0 36 ..................................... TACAGCACACCGGCGCGACTGGCCGCTCTGATGCGC 808462 37 100.0 37 ..................................... CGGCGGTGAAAAAAATATGCAGAAAATATGCGGATCA 808536 37 100.0 38 ..................................... CTTGCTGCTGGTGAGCTTATCTCATTTGGGCTCCCAAC 808611 37 100.0 36 ..................................... TAGCCCTCTGGGTACGGCGTCCGTTAGCGATTAATG 808684 37 100.0 35 ..................................... CTTTCTGAACTCAAAGAAAGATACATCGCAAGGAG 808756 37 100.0 35 ..................................... TTATATGCTCTCCAGAGAGCAGCTGCTCGTTCTAC 808828 37 100.0 37 ..................................... AAGTCATCGATAAACTCGGAAATATGGCGCAAATCCC 808902 37 100.0 42 ..................................... TATACATAGTCGATGATGACGATGAGGTAATCTCTGATCAGA 808981 37 100.0 38 ..................................... AAGCATTGTATCTATTATCTTGCGGCGATAATTGATGT 809056 37 100.0 38 ..................................... GCATAGTCGATGATGACGATGAGGTAATCTCTGATCAA 809131 37 100.0 37 ..................................... TTGCGGCCGTGTATACATCTCCAGCGCCCCGGCAGCT 809205 37 100.0 39 ..................................... GTATATCACATTGCGCCTTTTCAGACACTACCATTTGGT 809281 37 100.0 36 ..................................... TGGAGGATTAATTACAGGTGCAGCCGGCACTATTGC 809354 37 100.0 37 ..................................... GTGGGCCATCAAGTACGATCACTTGTTTGGACTGCGC 809428 37 100.0 42 ..................................... TGCGGATATTAATTTCTCCTTATCTACTGTCTTATATGTATC 809507 37 100.0 37 ..................................... ACCGTGAGATTCGCCATTCGAGCTCGTGCGGTTCGAA 809581 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 32 37 100.0 38 CTTTCAGTATCCTCTAGCGGATCGTGGGGGCTGCAAC # Left flank : TCAGAAGGTTATCCCAGTACAAGTAGTACTCCTTTAGGAAGCCCTCGGGATTTTTGGGTGCCCACATTTGGAAAAATAGAGACAATATTACCTGGATATACTCTAGTAGCATATGGCTTCTCTTATTCGTTAGGGGAACTGAACATGTTTAGTAGAAATCAGATTTTCCTTTTAGGGAAAAAAAGAACGATGTTTCAGATCACAGAACTATCTGATGTAATAGAGGGAAGTCACAAGAAAGGCTACTGTGATACAGAGTGGTGGATAGAAGTTCCCCCGGTTTTTGGTGATAAGTTTCAACGTTTTGAAGTATTAGGAGCAACTATGCGATATCTTATTTTGCGGGGCATGACAAAAGATAGTTTAGACTATGTGGAGTTCAACTTCTCTGACGGGAGAACAATTCGTTTGCCTTACTTTTATCTCAAAACAGTTCCTTTGAATGACAGAGCGTAGGGGCTGCCGTGGGGCACCGAGCGGACTCCCCCGCTTCCTCACCA # Right flank : CAGCCCCCTCTGCAGCCCCGTGGGCCTGATGGTCGGCCCATATACAACCCTATTATACCACGTATTCTGGAATTAGAAAAGGGGGTTGATGCGCCTGTGTTCCTTCTTTTGAGCGAGAGGCCGCGTGGGTTCGCAAATCGAAATTTGTAAGAAAAACCGGGGGGATTTGCGAACTTTCCTACACAGTGTCGTTGCAGAAGCGTCTGAACTCGCACACCCTGCACTTGTGGTGGCTCTCTGTGGCCGGGGGAATGGCTTCGCTCTGGAGCATGCGGTACATCGCCTCAATGGTGGAGTGGACCGTCTCCCTTATCGGGGCCTCTATTGGGATCTCGCAGTGGTGTTTGAGCGGTATGAGATAGAGGAATCCTCTGCGGACCGGTTTTCTCCAGCAGTCTTCGAGAAGGAGTGCATAGGCGGCCACCTGGAGACGGAAGTGGTATCTGGGCCTGCGAGAGAGCTTGAAGTCGACGGGGATGAGTTCGTCTTCGGTCTCTATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGTATCCTCTAGCGGATCGTGGGGGCTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //