Array 1 155444-155639 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK319088.1 Mycobacterium tuberculosis TKK_05SA_0017 adWvW-supercont1.3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================ ================== 155444 25 100.0 32 ......................... CCCGCCAAATTGCCCGCCTCCTCACTCGCGCC 155501 25 100.0 32 ......................... TAGGCATGGACCGATACTTCCGCGGCGGCGGG 155558 25 100.0 32 ......................... CCCGCCAAATTGCCCGCCTCCTCACTCGCGCC 155615 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ================================ ================== 4 25 100.0 32 ATTCCGGCGCTCGCCGTCGCCGGGC # Left flank : AGTTCAGAAATCGAGCCGAGATTGCTCCAGTCGTCGAACAGTTTCACCGAGATGTTGTCGCCTTGTACCCGAAACGGGACACCCTGCTCGTCGTTGTAGGTGCATACGCCCTTTGCCGCGAGCGGATTGGCCCGGACGTCGACATCGGCACTGGTAATACCCAGCAAGCTGTCGACTTTCCCGGTTGTTCGGACCGCTACGTGCACGCTGGTCAACCCTTTTGTCGCATCAAGCGACTGCCTGATCTCGGCGAGGAGCGCGGGGTCGGACGCCGTCGGGCTCACGGGAACACCCTGTTCCTCGGCATCAGGTTTCGGCGAAGAACATCCTGATAGCCACAACGCCAGGCAGGCACCTAGCACCACCAGAACAGCGGACGTCACCGCCCGTTTTCCATCATTCATTTGCGCTCACTACCTCGATTGTCAAATGGGCCCGCAGGCCGAATGCAGGTTGATTGGATCACGCTGGGCATGACTGCCCGCCTCCTCACTCGCGCC # Right flank : CTAGGCATGGACCGATACTTCCGCGGCGGCGGGTTCGACAACCTGCGCGTCGCCGGGCTAGGCATGGACCGATACTTCCGCGGCGGCGGGTTCGACAACCTGCGACGTCGGATCACCGGATTCCGTTGGGCGGCTGCCAGACATTTGCTGGGCGACATACTCGGCGACCGCAGTGGGAGTGGGATGATCGAAAATCACGGTAGGTGGCAGCGTCAGTCCGGTGGCGGTTTTGAGGCGGTTGCGTAACTCCACAGCCGTTAATGAGTCGAAACCGAGGTCGCCGAATTCGGTGTCGGGGTCGACGTCCTCGGCGGAGGGCCTACCCAGCACTGCCGCTGCCTGCAGACACACCAGCCCCACTAGCAGCTCGAGTTGTTCGTCCGCGGCCAGCCCGTGTAGGCGTTGAGCCAGCGCCGACTTCGACGAGGTGGCGTCACCGGTGTCGTCGATTTGGCGTCGGCGTGGGCGGCGCGCGAGCCCGCTGAACAGCGCCGGCAACG # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCGGCGCTCGCCGTCGCCGGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 136655-135878 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK319095.1 Mycobacterium tuberculosis TKK_05SA_0017 adWvW-supercont1.10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 136654 36 100.0 37 .................................... ATTTTGAGCGCGAACTCGTCCACAGTCCCCCTTTCAG 136581 36 100.0 40 .................................... CCGACGATGGCCAGTAAATCGGCGTGGGTAACCGATCCGG 136505 36 100.0 40 .................................... CCGACGATGGCCAGTAAATCGGCGTGGGTAACCGATCCGG 136429 36 100.0 38 .................................... TAGTACGCCATCTGTGCCTCATACAGGTCCAGTGCCCT 136355 36 100.0 35 .................................... CTGACGGCACGGAGCTTTCCGGCTTCTATCAGGTA 136284 36 100.0 36 .................................... CCTCATGGTGGGACATGGACGAGCGCGACTATCGGG 136212 36 97.2 37 ......G............................. TGGACGCAGAATCGCACCGGGTGCGGGAGGTGCAGCA 136139 36 100.0 40 .................................... GCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCAT 136063 36 97.2 40 ...C................................ ACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCA 135987 36 97.2 38 ..................A................. TTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGA 135913 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 11 36 99.2 38 GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC # Left flank : AACCCCGAGAGGGGACGGAAACATTTTGAGCGCGAACTCGTCCACAGTCCCCCTTTCA # Right flank : TACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //