Array 1 658663-659086 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXYW010000002.1 Capnocytophaga sp. oral taxon 903 strain W10654 HMT-903_W10654_contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 658663 46 95.7 29 A..........T.................................. ATCACTGCCCTATTGGCTCTGGCAAGTCT 658738 46 100.0 30 .............................................. CCTGCTATTTCTGAAACACAATTCTTAGAT 658814 46 100.0 30 .............................................. CTTGGGTTATATTCGTAAGGGACAAGTTCC 658890 46 100.0 29 .............................................. TTTTTATTTAATCTTCATCAGCAGGACAC 658965 46 100.0 30 .............................................. GAACCTTGCATTATAGAGGTTGATAAGCAA 659041 46 97.8 0 ................................T............. | ========== ====== ====== ====== ============================================== ============================== ================== 6 46 98.9 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : ATGGTTTAAAAGTAATCAGAATTAACGCCTCTTCATTGTACATTCTGTATACTACAGATGGAAAGACCTGGACTGCTAACGCCAGTAGGTAATTCTAAAAGAAGTACTAAAAAACCCCCGAAAATATATATTTTCGGGGGTTTTTCATTTTTAATATGTGCTCTTCCTTCCTTATTACTTCTTTTTAAATATCAAATTTATCAAGAATAAAATAACGATAGCTCCAATAGCTCCTGTCAAGATAGCACCAATCCATCCTCCTCCAAGTGAGACGTGAAACACATCTCCTAAAAGCCAATATCCCACGATACTTCCAAGAATACCAATAATGATATTGCCAATAAGACCTAATCCACTACCTTTGTAGATAGTTCCTCCTAACCATCCAGCGATGGCTCCAATAATAAGTGTTGCGATAATACCCATAATTTTTAATATTAAATTAGGGTACAAAGGTAAGAATTATCATCTAAAAAAACAAATAAAAATCATAACGTTGT # Right flank : CAATTTTCAGATGAACAAATTGATATACTAAAAAGGTTGTTATTTAGAATTTGTTAAAAACAATACAAAGTCTACAATTAAAAGTTAAAACAATCTTAAACTTTGTTAACTTACTTGACAGAGAAGAGAATATCTTATAACTTTGTCGCAAAACTCTAAAATATTTAATCAAGAGAAGAAGGAGAAGAACTAATACTCCCATAATTAATCATTTTTATTATGAAAAAGTCAGTACAAATCTTTTTAGAACTTATCTCAGCTATTGCACTTTACTTGTTTATAAATTCAATAGCCTATGGAGATCATTTGGTAACCCTACCCCTATACTTAACAGGTGTAGTGATTATGAGTTATCTCTTTGTAAGAGAGAGACCCCAAGAATGCCTACAAAGTGCCTTACGCATTGTTCTTCCGTTTACGGGGTTAATGCTTATTGCAGGGAGTCTGCCTGATGCACATTTCAGTTTAGCTCTGATTTATATTGTGAGCACAGGGGCAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 659874-660755 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXYW010000002.1 Capnocytophaga sp. oral taxon 903 strain W10654 HMT-903_W10654_contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 659874 46 100.0 30 .............................................. AATGCCCTTAATAAAAAGGTACATTTGGGC 659950 46 100.0 30 .............................................. ACTGTCATTAAATTCTTTTAATCCCATCTT 660026 46 100.0 30 .............................................. TTTCCTATGTTTCTGAGTTTTTTGAGGTAG 660102 46 97.8 30 ................................T............. GGACTCTCAAGACTTCCTACGCTCAGCTTT 660178 46 100.0 30 .............................................. AATAAAATACTATATCAACTAAGCATACAA 660254 46 100.0 30 .............................................. CAGGAATAATACCACTGTTTACCTTCTCGT 660330 46 100.0 30 .............................................. TAAGTGAGTTATATGAATATCTAATCAGTA 660406 46 97.8 30 ................................T............. GTGCACCCCGATAGGCAAGCTCTCACGTTC 660482 46 100.0 30 .............................................. GTAGTAGCAAGGCACAAGGAACAGTACACG 660558 46 97.8 30 ................................T............. ATAATGCTTGTACCTCCTTTGCCCGAACCA 660634 46 97.8 30 .................................A............ GTTTAACAATAACCTAAATAAATATACAAG 660710 46 97.8 0 ...A.......................................... | ========== ====== ====== ====== ============================================== ============================== ================== 12 46 99.1 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : ATAGCCTATGGAGATCATTTGGTAACCCTACCCCTATACTTAACAGGTGTAGTGATTATGAGTTATCTCTTTGTAAGAGAGAGACCCCAAGAATGCCTACAAAGTGCCTTACGCATTGTTCTTCCGTTTACGGGGTTAATGCTTATTGCAGGGAGTCTGCCTGATGCACATTTCAGTTTAGCTCTGATTTATATTGTGAGCACAGGGGCAGCTTTTTTATTAGGAATGCTCATTGCCACCGTGAGCAAGACGTACCAGAAGATAGGCTTATCGGCATTGACTTTTCTGCTGGTAGTTGCCGTACGGTTGTCGTTTTCAGCGGAGTTTCAATATTTGATAGGCGTACATTGGTATACCTTAGGAAGTTAATCATCTAATAGAATATAGAAAGAGGTTGCTCAGAAGTCTGGGCAACCTTTTTTATGCTTTGTTACTTATAAAATATTTTTTTTGTGTCTTTGCGCTTTATTGTTGAACTATTTGATAAATCAAACATTTAT # Right flank : CTTAATGACTCATATAACTTCAAATGAGCAGGATTGCCTATGTAAATAGAACGGTATAACATAGTTTAAAGAGTGTTTTATTGGTTTTTAAAAAGGGGTTTTAATATTCGCCTATGCTTACAATATCGCCTAAGTGATTAATACGGACTTTTACGATATCTTTTAACCCTGACAAGCCTTCTCTTTTCCAAGTTGTATTTTTTAGAACATTATCTGTCTCTACATTAGTTTCTAGGTGATGTCTAAAGAAATAATCTTTAGTAGCTATTTTTTGTACTCTAAACAAATTGGAGCTTATCAATTTTTTATTTTTAGGATCTAACAAATCTATTTCAGCGGGATTAAAACCTGTTGTTGCATTAGGAAATACAAACATTTCATTCTGTTTCATCGTAAACAGAAATTGCCAACCTTCTTCTTGTTTATAGGTTTTATCAATAATAGGAAGCCCTTGTTGAGTACGTACTACCGCTTCAAAGAAGGAAACTATTTGTTCCTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //