Array 1 480156-481355 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593887.1 Tuwongella immobilis isolate MBLW1 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 480156 37 97.3 53 ......................C.............. GATCGAAGCCCGGAAACGGTACATCGCGGCCCGCGATGCGATGCTGGCCGCGT 480246 37 97.3 37 ......................C.............. TCAACCCCATCCGTCCCGCGTAGGGTGATGGCGTGCT 480320 37 97.3 40 ......................C.............. CTTGAATCTTGAACCATTCGATACCTGATTCATTCGACAC 480397 37 100.0 36 ..................................... GCGAGGTATGCCAGCCGCTGCTCGCTGGTAAGTTGG 480470 37 100.0 41 ..................................... CGTCGGAGAAAAAACTCTTATTGAACTGCCGAATTCTCTCC 480548 37 100.0 40 ..................................... GTATCAGCTCTGGATACATTTCCTCACCTCATTTGATCGT 480625 37 97.3 42 ...........A......................... CCGATAAATTCCTCCCGAGGATCGATGCCGGTTGCGACCCAG 480704 37 94.6 40 ...........A..........C.............. CGTAACAATCCTGGTGGACTAGATAGCTGACATAGACCAT 480781 37 97.3 37 ...........A......................... GTTTTGACATCGTTGGCGTAACCCGCCTTGATGGTGT 480855 37 100.0 38 ..................................... CAGTCTTGGTGGACCAAGTAACTGACGTATGTCATCGA 480930 37 100.0 39 ..................................... GATCTGGACATCGTACCCCGCCCCGAGCGGATCACCTGG 481006 37 100.0 44 ..................................... ACGATCAGGAAGTTCTGGTAGAAATTCCATTGGTACGAGTCGTC 481087 37 97.3 40 ......A.............................. GAGAATGCACCGAGATCGTCGTTGCGAATGTCCCGGTAAT 481164 37 97.3 40 ...........A......................... GTGATTTCGATTCCGTTGGCGAACAGCCTTCCTCTAAAAG 481241 37 100.0 41 ..................................... AGGATGCCCAGCGGCTGCATCACACCGTTACCGTTGACGAT 481319 37 97.3 0 ......................C.............. | ========== ====== ====== ====== ===================================== ===================================================== ================== 16 37 98.3 41 GGCGCAGTCCGCACGAGCGATTAGAGCTCATTGAAAC # Left flank : ATGCTCATTTCGCCGATTTTTGCGGGAAATTCCGCAGAGATGCCATCGCCAGAAATTGCGAAAATTCCGGTGCGACGCTCGGCATTGGGAAGTGACACAGGCCGGGCTGCGGTTCCAATCGGCAATCGCAAGCGCATCTTCCCGGCGATGGCGGATGGGGTGCCCGACAGACCGCAAATTCGGATTGTGGTGAGAATCGATCGTCCCAAGTCGCCCGGTTGGGACGCAACAATGGGCATGCCCCGACGTTCGCCAATCTCCACGAATAAATTGGCACCAAATCGCCCCAATATCTTGACAAGTCGCTCCAATCCCCGGATACTAATGCCAGACGACCGATCCAGGTGGGCAACGCCGGAAGTCCAACCAGGCAACGACGTTCCGTCTCGAAACGATGTGCTGAATGCTTGTGCGTCTGTTGGATTAGCAGGTTTCCTCCCCCACCCCTGGGCAAAACCTCCTCCCAACCCCAACCGCCACAACGACTTCGGTCACCCAGA # Right flank : CCCCCTTACACTCTCACAGCGGGTGTCCGCTACTCCAGGCGCGGTCCGCACGAGTGATTCGAGTTTCGACTTCGCGGAAGGTGGGGCGGGGGAGAGCCGCGTGAGCAAGAAAAAGGCGTTGCGGGCGGCGTTTCGAGAGGCGGTTTTTTCGCGGGCGAAGCATCGCTGTGAGTGCTGCGGCGTTGCGGGATTCGATCGGCAGGCGGGAAGTGGGAATGGCGTGCCACTCGATGCCCATCATATCGAAGATCGACACACCTTTGCCCATGGCGGCTATGTTCTGGAAAATGGCATCGCGGTCTGCGATGACTGCCATCTCAAGGCCGAGGCGTATCACATGAATCGCGAGCCGGAGCCGGGATTCTGGCCGCATGAATTGTATGCCAAAATTGGCTCATCCCATGCCGATGCACTCGCGGCGGATGCCGAACATGCAGAACGCCCCAGCACGAATTGACCGTGTGGGGCGTTGAGCATTTTCCGGCATCGGAATCGAATCG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGCAGTCCGCACGAGCGATTAGAGCTCATTGAAAC # Alternate repeat : GGCGCAGTCCGCACGAGCGATTCGAGCTCATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 2 839447-840100 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593887.1 Tuwongella immobilis isolate MBLW1 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 839447 37 94.6 42 ......AC............................. ATACGACTATCCTCCAATCGACAAGTACCAACCCACAACAGG 839526 37 100.0 37 ..................................... TTCGCAACGAAATTGCGTTTTTCCGCGCCGCTTTTCA 839600 37 100.0 38 ..................................... TCCGGAGGGACCGTCCCCAGTGAACTGGATGTGTCCAT 839675 37 100.0 46 ..................................... ATAGCGATTGCGGATGTTAGCTGATTCAGCTCCGGAGTTGATGTAC 839758 37 100.0 42 ..................................... GCGGCGGATGCGGTCTCACTCCGCTGGACTGTCTGTTCTTGC 839837 37 100.0 35 ..................................... ATGATGCACAATTTGCTGGCCCGGCTGATGGCCGT 839909 37 100.0 40 ..................................... CTCCTTCCGCGCTAAGCTAAAAGGAAAGACGCTGATGCAC 839986 37 100.0 41 ..................................... AGATCCCAATGTCCGCAGTCGAACTCCGTTTTATCGACAGC 840064 37 91.9 0 .......C..........................C.T | ========== ====== ====== ====== ===================================== ============================================== ================== 9 37 98.5 40 GTCACAGACCTAACGAGCGCACAGAGCTCATTGAAAC # Left flank : GCATTTTTTCCGAAAATTCTCCGCAATGCTGCCGATTTCCAATCCGCGAATGCGAAGGAACCCTATCGCGTGGCGGCAGTCGATCGCTGGGTGCTGACGATTTCGGCGAGTGATCGTTGGCAACCGAGTGATTTGGTGCAGACGCCGAACCAGGGAGATCGGGTGAACCCCGATCGATTTGGGGAATTGCTGCACAGTTGGGTGAGTTGGTGGCACGCAGGACCATTGGGATCGCTGTTGCAACAAACGATTCGCGGATTATGCCAGGAGTTCCGCAAAAAGTCGAGCTACCAGCTTGACAACCCCGCCGACCCACCGGATACTATCACCGAGCTGTGAGACGGGGTGGGCAACGCCGTAACCGTAAGGAAGATCAGCAGTTCCATCTCGGATCAGTGCTGTTTGACAATGCGGCGATGATCGAAGTGAGCGGGACCAGCCCCACCCTGGGCAAAACCCTCACGCAACCCCAACTGCGACAACGACTTCCAACAGCCGCA # Right flank : TCATTCCTGCCGGAGATTCGCTTCTGGGAGGGACTCACCTCTTTACATCACAAATCGGCACTTCCATTTCATTGATTCAATTGATGTGATATCTCACGATTCACGACTCATAACTCACAACTCACGACTGATCACTCACAACGCACGACTCACGACTCGTCGTTGGGATCGTTGCCTGGATGGGAATGGGGGCGATTGGGGCTTGTTCTTGTTGGGATGGGGGAGGAAGTGCCGATATCAATATCGATGCGGGGCGGGGGGAAATGAGAGGGGCGGGATCGCCGAGGCACCCATCGCGTGGGCGATGGGATGCGTGGGGGCGATCCGGGGTGGCGAGTGTGGCGGGGCCGTTGGGATTACTTCGCTAGGTCGGACTTGATGTAGGTCAGCACTTCGTTGATGTGCTTTTGCACGTTTACGGTCGGGTAGATTTTGCGGATGGTGCCGGTCTTATCCACAATGAACGTCACCCGTTGCGAGACTTTGCCGTTCTTGGCCAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGACCTAACGAGCGCACAGAGCTCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 3 4370104-4371665 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593887.1 Tuwongella immobilis isolate MBLW1 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 4370104 35 100.0 35 ................................... GGAGGAGGGTTTTCAACTTCGCCGCCAGCAAGCTG 4370174 35 100.0 37 ................................... GAGTCAATGCAGCCAGTGACGCTTGACGCGCGTCAAC 4370246 35 100.0 37 ................................... AACTTCCCGACCCGTGTCGACGTCCCAAATTTTCACA 4370318 35 100.0 33 ................................... AGCCACCAGGTGGCTCGGACCGTCTTCCGGACG 4370386 35 100.0 36 ................................... TGCTCTGCCCAGTAATCTGCTAGGATGCCGAGGTCA 4370457 35 100.0 33 ................................... GGAGAATTTTCCCGGACATCGTATCGCGGCGTC 4370525 35 100.0 33 ................................... CCGCCCTGACCGCCGTTGGCCACGACGTTGTTA 4370593 35 100.0 34 ................................... AAATCACTACCCTGTTCGCCGAGAAGGGTATAGT 4370662 35 97.1 33 ................T.................. TATCCTTCTTGCCGTCCTTCTTGGGCTCGTCCT 4370730 35 100.0 32 ................................... GTCTGGAAGTTCTGCTGCTCGAGGTACGGCAA 4370797 35 100.0 35 ................................... GACGAGATTGTGCCGGGATGCAATCTCGGGCAGTT 4370867 35 100.0 33 ................................... TCCATCGGGGTTGAGGGCAAAGCGCCCTCGCCC 4370935 35 100.0 32 ................................... AGCGTCGAAGCGAGTTGGTGCGGTGCCACTTG 4371002 35 100.0 34 ................................... ACTGCGGTCTTGATCTGGTCGCGGTGCGGCATCT 4371071 35 100.0 39 ................................... AAATTTCTCTTTCTGACTGCCCGCGTTGTTGGGGGAAGA 4371145 35 100.0 33 ................................... CCAGCCAAGCTCTCCCGAAGTAGAACTAAATGC 4371213 35 100.0 31 ................................... CGCCTTTGGCGGCGAGCTTGTCCGGGTCAAC 4371279 35 100.0 34 ................................... CGACCCCCTTTCTCGATGACATCGGCCAGATATG 4371348 35 100.0 34 ................................... TGAACGTGGCGCGCGGCTGCGGCCCGTCACTGTT 4371417 35 100.0 39 ................................... GAGCCTATGGAGATTCCAATTATCGGGTCAGGTTCTTAA 4371491 35 100.0 33 ................................... CCGCCCTGACCGCCGTTGGCCACGACGTTGTTG 4371559 35 100.0 37 ................................... TCGGGTTGACCGCGTGTTCCGCCTTCGTCATCTTGTC 4371631 35 88.6 0 ................T.T............TG.. | ========== ====== ====== ====== =================================== ======================================= ================== 23 35 99.4 34 GTCCCTTGACTCCCGAATCCGGCGAGAATTGAAAC # Left flank : AGACCTCAACGACCTGCAATTGCGGATCGGATCGCTGCTGGCCCGCGATGACCGCTTCGACTTTTTCCCGATTGATGTGCGATTTCCGCAACGTCGGCTGTCGTGGCAACGAAATCCCCTTGTCGATTCGTGTGTCATTGTGATAGGATGATTGTGTTGGAATGATGGTCTGGGCCAGCGAGCGGCATTGTTACCCTCGACCCGCCCGCACCATCACCCCAACACCCGGTTGCATCGCTCGCCATGGTTGTGGTGTCGATGCAACCCCCTGACTCGATCGGTGTTGTCGAGGATGCGGCCACGCCCCCAAATGCCCGGCGTCCGCGGAAACGACCCACCGCCAAGACCACCGTCTCGCTCCCCAATTTTGGAGCCTCGGTGTTGTCGATGAATCGTTCTTTGACATGTGAATCATTCCACGCAATCCCAAGATGCGACGCAACCGGTTGCCCCGCAACAACTTGCGTTGATCTTCCGCGATATCACACCGACCCCAGTCG # Right flank : CAGCGGTAGGGCGATGATTTCGGCACCGATCATGGTGCTGGGTGGTTCTTGATTTCGGTGCAACGGATGGCGTGTAAGGGCGGTGCGGAAGGTAGATTCGGCTGGTCAATCGGGTCGGCGGGATTCCGTGGGGCGGAAAACGGCGGCGGATTCGACTTCTTGCTACAACCGTGCGGTGAAGCTGGTAAAACGATGCGTACCGATGGCTTGCGTCGATTCGGCGGCGGGCAATTCGGGCCGCGTCGACCTGCAAGGCAGGCTCACCGACGGCTCACACGGGAAGAAGGATCGGATCATGGTGAAAATTGGCTTGGTCGGCGTGGGGTTCATGGGCTGGATTCATTATCTGGCCGCGCAGAAATTGACCGGGGCGTCGTTGGTGGCGTTTGCGAGTCGGGATGCCACCAAGCGGGCCGGCGATTGGCGCGGGATTCGTGGCAATTTCGGGCCGCCGGGCGAGCAAATCGATGTCGCCGGGCTGAAGACCTTCGCCACGTTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCTTGACTCCCGAATCCGGCGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 4 5942790-5957854 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593887.1 Tuwongella immobilis isolate MBLW1 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 5942790 36 88.9 38 ......TCC.....................A..... TGGTTGTTGAAGCGTATCTATCTGGAATTGTCGGATTA GA [5942793] 5942866 36 97.2 36 ..............................A..... TGGCGCGCGGCGGTATCGCTGGGATATTGTCGCTCG 5942938 36 97.2 38 ..........A......................... GCGAGCGACGACGATTTGGCCACAGTGGCACAAATCGT 5943012 36 100.0 37 .................................... GCGTCGACCGCCCGGCATCCGGCATTTGCTGGATGCG 5943085 36 97.2 40 .............A...................... ATGAATCGCTGGACGTGGTGAACGCGCAGATCCAAGGCGC 5943161 36 100.0 40 .................................... GATGGGGATCATCGCGCGCTTTACGAGTTGATGGGGCAAC 5943237 36 100.0 39 .................................... TCGTTGTGAGCCACCCCGACGAGCCACAGGCGGTGGGAC 5943312 36 100.0 42 .................................... ATGGTGGTGTTGTCGAACTTGAAGCACGATGAGCGCAAGGGT 5943390 36 100.0 38 .................................... ATGCCGAGCTTCTTGGCGAACGCCTCACGGGAACGATC 5943464 36 100.0 37 .................................... GAGATCCGTTGCGAATGGATCTTGCGGCGATGATCCC 5943537 36 100.0 38 .................................... GAGATTCTAACAAAAACTGGAGTATCACGATGGTTGGA 5943611 36 100.0 37 .................................... GGAAGCCGAGACAGGCTTCACGTTGTTGCGACGGCGC 5943684 36 100.0 38 .................................... GATATCCAGTTCTCGGTGTTCGGCGAGTGGTTGACTGT 5943758 36 100.0 36 .................................... ACCAGATCCTGTTCGCTCATATGGCCCCCAAAACGG 5943830 36 100.0 40 .................................... GGGGTTCGCATTTCGCACCTCCTCGGCGATGGCCGACGTG 5943906 36 100.0 38 .................................... GTGACGAAGCAGCCCAGACCCTCCGCAACGTCCATGTC 5943980 36 100.0 38 .................................... CCTACGTCGAGGTGAATGTGTCGTGCCCGAATGTCCAC 5944054 36 100.0 41 .................................... GCGCTACCGGCTACATCGCCCTCGACAAGAACTCCGAGGTT 5944131 36 100.0 36 .................................... TAAACTGCAATCATTCAGAAAAAGAATTGTGGGCGA 5944203 36 100.0 35 .................................... GTCAAAATCGGCTTGTATGGCCCGCCGGGATCGGG 5944274 36 100.0 37 .................................... GTTCTCCGGTCAATGGGTTCGAGGTCCTCGGGGCGGT 5944347 36 97.2 38 .......................C............ GACAGACTTCAACCGCTACTATCCGTTAGAACAGGAAT 5944421 36 94.4 37 .......................C.......A.... CTAATACACGTACTGATGCTTTATTATGGGTTCGTAC 5944494 36 97.2 37 .......................C............ AAGATCTTACGAGCAGTCATCAATTGAGCATTCGACA 5944567 36 100.0 36 .................................... CACGTTCGCCGCGTTGAAAGGATCGCCAGCGTACAG 5944639 36 100.0 38 .................................... CCAATTGCTGCATCGATATCGGGTCATTGCGTTGGAGC 5944713 36 100.0 36 .................................... ACCGCGAAAGGAAAGTAAAATGCGAACGATGATCGA 5944785 36 100.0 36 .................................... GTCGCGATTCATCGGACGCCCATCGTGACAACCCCA 5944857 36 100.0 40 .................................... CTCGAAGAAGCGGAGTCCGTAATCATCGGCGTGATGGGCC 5944933 36 100.0 37 .................................... CTTCCGCCTTGCCTGCCGCCTTAGAAGGGAGACGGGC 5945006 36 100.0 37 .................................... ACGGCAAGTGGGAGTTCGCCGACTTTAACCCCGTCCC 5945079 36 100.0 38 .................................... ACCTACAGCTACACCCCCGACTGGCCCGCTGGCCCGAA 5945153 36 97.2 38 .......................C............ TCGGTGGGGGCAAATAAAGTGCATGGGCAGCGACGGTC 5945227 36 97.2 37 .......................C............ ATCGGATCGAGAAAACGCCAGAAGTCACCTACGCCAA 5945300 36 97.2 37 .......................C............ AGGTAGCGTTGCCGAAGAAGTCGCCGCAAACGCCTGG 5945373 36 97.2 37 .......................C............ ATATCTCTTCCGAGCCGGAAAGAAACCGGGCGAAAGT 5945446 36 97.2 37 .......................C............ AGGTAGCGTTGCCGAAGAAGTCGCCGCAAACGCCTGG 5945519 36 97.2 36 .......................C............ TCGAAAACACGCTCTCTTACATCGTTGGACCAGCCG 5945591 36 97.2 38 .......................C............ GCAATTTCCCTGACATACACCTGAAGATCAGGCGGAAA 5945665 36 97.2 36 .......................C............ ATCGAAGAACTTGTTTCCGCGGGCGGGGATAACCCC 5945737 36 97.2 36 .......................C............ ATGGGGCGGAAAATTCGCTCCATTATCGCACGCTTG 5945809 36 97.2 38 .......................C............ GCTGCGTGAGACTGACTCTCGGTACCCGAGATAATTCC 5945883 36 97.2 36 .......................C............ ATGGGGCGGAAAATTCGCTCCATTATCGCACGCTTG 5945955 36 97.2 40 .......................C............ GACGCTGTCCCACACCGTGCAAACGTGATCGCCCGACAGC 5946031 36 97.2 37 .......................C............ CAGGCAGCGTTCCCGCGAGGAATGCCGGGCCTATTTT 5946104 36 97.2 37 .......................C............ CCTGCTACCGTTGAAGTCGTGATCTCCAGCGATCACC 5946177 36 97.2 34 .......................C............ AGGAACAGCCTCGAAAGTGATGGATGCTATCGGC 5946247 36 97.2 38 .......................C............ TTGGGGGCCGGCGATCCCAGCCCGCGGATTTCCGGACA 5946321 36 100.0 36 .................................... CCTGCCCGTTGTGAACAATCACCTCGGGCAGTGCAA 5946393 36 97.2 36 A................................... TCGGGAACCTGGAAATACCCGCATTTGGAATCGCTC 5946465 36 97.2 36 A................................... TTTATCTTTGGATTATCAGATCGGAAAAACGAATCG 5946537 36 97.2 36 A................................... GCTGATCGGAATATCCGAGCCGTTTCAGGGCCACAG 5946609 36 97.2 37 A................................... GAGGCAAGGCCCAAGAAGGCAAACTCGGGCCTTTTAG 5946682 36 97.2 36 A................................... AGTCGAATCGATGATGCGGAGCCTCAGCGCCATGGC 5946754 36 97.2 37 A................................... GATCGAGCATCGGCTCCAGCCATGGCCCGAGCTTGTC 5946827 36 97.2 37 A................................... ATCACCCACGCCGACCGTTCCGGGCCGTCAAGTTCAA 5946900 36 97.2 44 A................................... GTCACGTTGCTGGCCTTGATGATCGTCGGGGCCATCGTCAGCAA 5946980 36 97.2 38 A................................... AACGTATGCCGTTGACAAGGGGTACAAGGCGTTCGCCG 5947054 36 100.0 39 .................................... GGGGCAACCCGGCGAAACGATCGTTGCCGCCGTCGGATG 5947129 36 100.0 40 .................................... CGCTCGAACGCGACACGCTGGAACTGAAGGCGACTGCCGC 5947205 36 100.0 39 .................................... ATCTGCGATATGTCGGATACCTCGGATCATGTTGAGCAT 5947280 36 100.0 37 .................................... CCTCCATCCAATGCGTGACACCATCGACGGAGACTGG 5947353 36 100.0 36 .................................... TATGAACCGCCGGAGCGAACCTGGAAATAGTTGAGG 5947425 36 100.0 37 .................................... AGGTTATATCATCTCCGTTCGTCCTATCTCGCGGATT 5947498 36 100.0 38 .................................... ACGTAGTATTCGCCGCCCCGAGGGCCACGCCCCCAGGA 5947572 36 100.0 41 .................................... ACAATCCCCGAGTGAACCAAGATCGTGCGGCCCTCCAACAG 5947649 36 100.0 35 .................................... TCTGATCTCGACTACTCGGTGGCCAACGCGGTCAT 5947720 36 100.0 40 .................................... ATGACCCGGTTCGACTCCGGGCGTGTGGAATGGGGAACGA 5947796 36 100.0 39 .................................... GCGGCCCACTGGTGTCATGGCTATGTCGCACGATCGGGC 5947871 36 100.0 36 .................................... GGTGGCACCGCACCCGCCGCAAAACAGCCCAAGGCC 5947943 36 100.0 37 .................................... TGGAAACAGTGTCAGTGTGTGGTCTTTAGCGTAGTAG 5948016 36 100.0 36 .................................... GATAATCCATTTCAGCTATCGGCTGAATGGTGGTCA 5948088 36 100.0 40 .................................... CTGGTCTATCGTCTCGGCACAGTCGCATCGGGTGTCACCG 5948164 36 100.0 39 .................................... CGTTAGGGCCCGGAATCCATCGGTACTTCGGCTCACCAT 5948239 36 100.0 36 .................................... CAGGAAGTGCCGGATTGCCCGTGCGTTGGCGGAAAC 5948311 36 100.0 38 .................................... GAAGCAAGCGATTCGGCCATCCGGGAAATCCAGGATCG 5948385 36 100.0 38 .................................... GCCGGGAATACCCGCTTGACGTGTTGCACAAGGCCGCC 5948459 36 100.0 37 .................................... AACTGTGGTGGCGAGTATTTCCATAACGGAAATATCG 5948532 36 100.0 37 .................................... GCCACCTTTGAATGTCATTCGGAAGGCGAGCACCTGG 5948605 36 100.0 37 .................................... ATGGTCACTCGACGATCTTGGAATGTCAAACTTATGA 5948678 36 100.0 42 .................................... GCTGAGCTGTTCGCCCTGCTCGGCGGCAAAGGATTCGGCGCG 5948756 36 100.0 38 .................................... CTGGATCTCTCGACGCAAATTCCGGCGGGTGCGGCAAC 5948830 36 100.0 37 .................................... GCTTTGCGTGCCTTGCTTCGACAATTCCGATTTTTCC 5948903 36 100.0 38 .................................... ATCGGCGGAACGGAGTACATCGTTTCCCCGATCCTGGG 5948977 36 100.0 37 .................................... GAGCTTTGACCATCGATGAGCTCGGAAAATTGATCGC 5949050 36 100.0 37 .................................... TTGAATTCTTGCAATTTTGCCTTGGATATTGGCTCAA 5949123 36 100.0 36 .................................... GCGACTCATCGAGAGCCTTGCACGCTGCTATTTCCG 5949195 36 100.0 36 .................................... TTGGTGGAACTCCGCGGCGCGTCGGCTAATACGATC 5949267 36 100.0 36 .................................... GCCAATCGACTAACCCGACGTTTTGCGGATGCGTTT 5949339 36 100.0 36 .................................... GGGTATTGTTGTAATCCTTTCCCTCCCTCCAGAGTC 5949411 36 100.0 39 .................................... AGCGCGGCGTCGGCAGTCCCCGCGAGGAAGCAATCTGAG 5949486 36 100.0 38 .................................... CACGATGATTAATAAATTGGACCGACGAGAAGAACTCA 5949560 36 100.0 37 .................................... CCAATCGATTCTCCCGCGCCTCCCGCAGCATGGCGAT 5949633 36 100.0 37 .................................... AAAATCAGCCCACCAAAGTCCTGCATTTCAGTGAGGG 5949706 36 100.0 39 .................................... GATGCAAATGCTGTTTTTGCGACTGCGAGCCTATCAGCC 5949781 36 100.0 37 .................................... TGGAAGACGAGATTTTCGAGGCTCAGGACCAACTCCT 5949854 36 100.0 38 .................................... ACCACGCGGCATCACCTGAGTGATCCGGAATTTCCGGA 5949928 36 100.0 41 .................................... AGCTTTTCCTGCTCGATCGCCATCAGTTCGGCCGATGTCGG 5950005 36 100.0 38 .................................... GCGAACACGCCCGCTCCCAAATCGCGGCGGACCACAAC 5950079 36 100.0 38 .................................... GCGGGTCAATCCGGAAGTGTGGCGGCAAGCGAAAACCA 5950153 36 100.0 38 .................................... GAGTCGTTCATCAACGACTTGACCGGCGAACTGGTGGA 5950227 36 100.0 40 .................................... GCGACTTGGCAGAGTTGATCGCTGACAGCCGTGCCATAGA 5950303 36 100.0 37 .................................... GAAGACAGAAGAAATGGAAGCTAGCGCTTCCTGTGCC 5950376 36 100.0 41 .................................... ACGAACGTGATCCGCATGGCGTCCAACGAAAAAACGGCGGT 5950453 36 100.0 36 .................................... GAAGGTGAGTGCCGCCTTCAAGGGACCGGACATCGA 5950525 36 100.0 37 .................................... GCTACAACGACCGTCCTGCTGGCATCCGGCTCATCAA 5950598 36 100.0 37 .................................... TCAAAAACTGGTCGAAGATGGGCGAGTTGGTTTCCCG 5950671 36 100.0 38 .................................... TCGATTGAGATTCGCGCGTTTTCCTCAGTGGTGAAGAA 5950745 36 100.0 36 .................................... TCAGGTGAGAACGCACCAAGAATCATCGACGGCATC 5950817 36 100.0 39 .................................... GACCAGGATTGGGCCGCTCATTGGCGAGCGATTCGATCG 5950892 36 100.0 36 .................................... GCAAGCAAGCTTGGCTATGCGGCGGGCTACGAGCAG 5950964 36 100.0 40 .................................... GATTCTGCCCCCGACGTGGCGCATAGTCGAGACGGTTCCG 5951040 36 100.0 40 .................................... GGTTCGCCGTTATACATGGAGCAGCATTCGGGCGATTATC 5951116 36 100.0 38 .................................... CGCTCATTAAGGGCGAAATGACGCTTGACGACGCCAAG 5951190 36 100.0 34 .................................... GCCATATCTCAGCCCTCTCTCTCCAAAGATCGCC 5951260 36 100.0 36 .................................... CCAGCGGGGGTTGCAGGTGATGCCGATTCGGCAGGG 5951332 36 100.0 41 .................................... ACGGATCGGTGATCGCGGAAGCCCTCGCGGATTGCTTTGAG 5951409 36 100.0 37 .................................... GCGGGCCGGAAATCCAGCCGTATCCGCCAACGGTGTC 5951482 36 97.2 37 A................................... GATGATGATCCGGGATCTGCTCAATTCGCTTGTCGCT 5951555 36 100.0 39 .................................... CGATGTGCCAGATAGTGGTGCAAGCCCGCATAAAGCGCA 5951630 36 100.0 37 .................................... AACGACTTGTAAGTCGATTCGCTCGAACCGGCGAGCG 5951703 36 100.0 40 .................................... ACCGGGCCGCCTCATCCGCCTGTCGGCGAAGACCACGCCG 5951779 36 100.0 37 .................................... CGCACCGATCGTCACCAGCTTTCCGTTCGGCATTTGC 5951852 36 100.0 39 .................................... GCAACCATACTTCAGGACGAAGTCCTTGGACAGCCAGCC 5951927 36 100.0 35 .................................... CGGTCACGCGGTCGAACTCGTAGAGACGCTTCATC 5951998 36 100.0 36 .................................... ATGAATTCCGAAGACTTTCCAGAACCGGCTTATCAC 5952070 36 100.0 39 .................................... GCCGTCACTGCGGACAAGATCGCAGACGGTGCCGCACTC 5952145 36 100.0 36 .................................... ACGTTGGTCAGATTAAGATCGCTACAATGTATATCA 5952217 36 100.0 38 .................................... CAAGATTGCCAGAATGACGCGAAATTGAAGCTCTTACT 5952291 36 97.2 38 .....................A.............. GGCGACGTGACAAACTGGTTGCCGTTCACCATGATCGG 5952365 36 100.0 40 .................................... GCCCGCGCTAATCGGGGCAATCCGGATACGACTTGGTCCC 5952441 36 100.0 37 .................................... GCCGATAGCGTCGCCGTAGTCGCGGGCGATGCGAACG 5952514 36 100.0 38 .................................... CGTAACGGAATTACGCGATGACGTTAGCGGAACGACTG 5952588 36 100.0 37 .................................... CTCGGCGAAACGACCAACTCCGGTACGAACGGATGGC 5952661 36 100.0 40 .................................... CATCGATCCGGGATGGCGAGGTGTTTGCTTTCCTGTTCTT 5952737 36 100.0 36 .................................... GCAGCACTCCTGGGCGGATGTGCCTGGAAATCGAAG 5952809 36 100.0 37 .................................... GTTGCGCTCCGGCAGGCGGCGAAATAGTGACCGTGGT 5952882 36 100.0 37 .................................... GTTTCGGGACTTACCCGGAAACGAGAAGCGGAACAAA 5952955 36 100.0 38 .................................... ATGGAGCGGGTGTTTGTGATGCAAATGGTTGTTTTTGG 5953029 36 100.0 36 .................................... CCTATCTTGTTTCGGCGTGATGGGGTTCGAGGGACG 5953101 36 100.0 37 .................................... CATGTTTCGTTGTCGTGTTCGTTAGCTCTTTATGGCG 5953174 36 100.0 35 .................................... TGGAACGGAATGTCTGACGTGGCGGTCGTTGCGGC 5953245 36 100.0 37 .................................... ATCGGTACGGTGGTGTTGGTGGTCGGGAATTGATACA 5953318 36 100.0 42 .................................... ACCATGGAAACGCTACGCTTTATCGGTTCCCCGTTGGTCAGG 5953396 36 100.0 35 .................................... GTGAATTGGTTTGGCGGGTGGTTTCCCGTGCGACA 5953467 36 100.0 38 .................................... CTGGTTGTATGCACGGTTCAAGCATCTACACTTGCAAG 5953541 36 100.0 37 .................................... GCGACAACAGGCGGGCGTTGAGCTGCCCCACATGCGT 5953614 36 100.0 36 .................................... GGCCCAGGCATAACCTTTGAGGGCCATCTGATCATC 5953686 36 100.0 38 .................................... GTCAACGGCCTGCAAAATTTCGAGTCGGAGCCGTGCCA 5953760 36 100.0 39 .................................... TGGGGTTGCTCTCTCAGGTGAATCTCAATTGGTTGCTCG 5953835 36 100.0 42 .................................... ATGGGCCGCAGTGCATAACCGATGACCGCCTGGAAATCCCGT 5953913 36 100.0 40 .................................... TCCATCCAAACGAACGAATGAAGTGTTCGTGAATCTCATG 5953989 36 100.0 39 .................................... GTGGAGCCATCATGTTCTGATGCCTGTTGAAATTACGTT 5954064 36 100.0 38 .................................... ATTTCAAGATCCGAGTAGCGCCACCAAACAACGGGAAC 5954138 36 100.0 38 .................................... CCGATCACGCTTTCATGCAAGAAACAAAGTTATACCTA 5954212 36 100.0 38 .................................... TCGATACCACATCTCACGACCAGATGGTAACGTAACAA 5954286 36 100.0 37 .................................... GGAGGCCGCCGCCAACAAGTCCGAGTGATTATCACGA 5954359 36 100.0 39 .................................... TCGATGACGTAGCTCAACGGCTTGTTTGGATTTTACCGA 5954434 36 100.0 38 .................................... GTCACTCGGATCAGTCGGAAGCTCGATGCCGATGAGAT 5954508 36 100.0 37 .................................... CCGGCTGGACTGTTCGCACGCTTCCGCATGGGTGGAC 5954581 36 100.0 39 .................................... GTTGTTTCCCCGCCGCTGGGCCGCTGCCAACTCTTGCTG 5954656 36 100.0 39 .................................... GATACGGCGATCGTGCCATTGCCGGTTCGCGTGCCAGCC 5954731 36 100.0 37 .................................... GCGATCGGCGAAAGCCGACGCAGCTCCGCAGCCAACA 5954804 36 100.0 38 .................................... GCCCGACGAACGCCGCATCGCCCGCGGAAAAAACCGAG 5954878 36 100.0 37 .................................... GCAATGAGGCAAGCGAGATGCAGCAATGCAGATCCTC 5954951 36 100.0 40 .................................... TGGGAGCAGTGGAGCTTAGACGAGTATCTTGAATACCTCC 5955027 36 100.0 36 .................................... ATCAAGAAGTGGACTTCCGATGTCGTGAAGTTCAAG 5955099 36 100.0 37 .................................... ATTATACATACTTACGATTCAACGAAGAACAGTCGAA 5955172 36 100.0 38 .................................... GCGATTGCGACATCGTCATTGGTCCGTGGATCGGCGCG 5955246 36 100.0 37 .................................... CATCAACGGGCAAGAGGTGATCCGATGAATGCGGACG 5955319 36 100.0 39 .................................... CCCGGACGACTTCGTGCTGCACGGGTTCGAGTCGGGGCC 5955394 36 100.0 37 .................................... AACGATCACCGTTCGGCCTGGGCGAGCCGCGACGATC 5955467 36 97.2 37 ..........................T......... ACAATCGGGATGAGTTCGAAGTTAAGGAATAGACACA 5955540 36 100.0 37 .................................... TCAAAACCTCACGGGCGGAACACGCCATGAGGCCGTC 5955613 36 100.0 37 .................................... TCCTCGGACGATCAAACTGCCGGAGCGGGACTGGTGC 5955686 36 100.0 37 .................................... TGGATAGTGTGTCAGGTGAAGACGATTTCGCCAGTAA 5955759 36 100.0 37 .................................... GGCATTCGGTGAGCGCATGCGCCACGTCCGCCACGCG 5955832 36 100.0 39 .................................... CCGATTGAATCGCCGCCGCCGAAACGCCGCACGGTCAAC 5955907 36 100.0 40 .................................... CGATCAGGATCGTGCGGATATTCCGCAGATCCTCGATCGT 5955983 36 100.0 42 .................................... TCCGCTTGTCGCGTCCGCTTGGTCGCGGTATTTCCCACGCGG 5956061 36 100.0 38 .................................... GTGCAAATCGGTGCTTCTGCTATCTCGAAAGTCAGCAA 5956135 36 100.0 37 .................................... CATTCCCTCGACTATTGCACGAATGACAGAAGATACC 5956208 36 100.0 37 .................................... ATTATCTCATCGGTTGTTCATCGGTGGTTCTCAGATT 5956281 36 100.0 38 .................................... AGCAATCATTCGAGCGCTTCCACGATATGACGAATCTC 5956355 36 100.0 35 .................................... TCCACAACGGGAACCTGTCAGCCAATTGGTTGGTG 5956426 36 100.0 39 .................................... GCCGTATCTGGTGGGCAAATTCTCTGACGATGCCCGCCG 5956501 36 100.0 36 .................................... GTGTTGGGCGACCGAATAAAAGGGCACATGACCCAT 5956573 36 100.0 38 .................................... GAGCGGGTGCCCACGACTACTCCGACACGATGATCAAT 5956647 36 100.0 38 .................................... AACACCAATGCGAATGACCTCGGTGGCAAGCGGATCAT 5956721 36 100.0 35 .................................... GCCGTGATTGGCCAGCCCGCGAATGGGTTTTCATG 5956792 36 100.0 39 .................................... ACCATATCCCGAATCAAACAGTCGAGGCTATTTGGCATC 5956867 36 100.0 39 .................................... CATATGACCGACGTATCGACCGATTTCGAGATGTCGACT 5956942 36 100.0 36 .................................... CCAGGTTCTGGGGTCGTCGTGGAATCAGACGGGATG 5957014 36 100.0 35 .................................... ACGATGTAGGCATCGACCATGCCAGGCTCAGCGAT 5957085 36 100.0 38 .................................... AGTGTCGCACTCTGCGAATCCAGGGAGCAAAATTTGCT 5957159 36 100.0 37 .................................... CGTGATGCCCGACGACCTGAATGCAGCGTCGGGCAAA 5957232 36 100.0 37 .................................... GCAAAGAGACTCTCGTTTGCCAGACCCGCGAGGTGGG 5957305 36 100.0 38 .................................... TTTTTCTTCCATCGGCGTGCCTTGCGTGGTTTGCCGCA 5957379 36 100.0 36 .................................... CAGCATCAGCGATTCGAGATCGAGGCTGATTTGCTT 5957451 36 100.0 36 .................................... CCGAATCATTGGAATCGATTCCGGGCAGCCAACAAC 5957523 36 100.0 36 .................................... GAAACCTGTTGGCACTGGCGGAGTGATTGCATTCCG 5957595 36 100.0 39 .................................... GGCATGTACACGCTCGGAAAAATCCTGGACTGCTGCGAG 5957670 36 100.0 39 .................................... AGCTCTTGGATTCTCGCCCGATGCGCCTTCATCGTGTCG 5957745 36 100.0 38 .................................... CCGCAGATGAGACGGAAGAGAGCAACCGCCGCATCGAG 5957819 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 205 36 99.5 38 GCTTCAATTCGGCCACAGATTTTTGTCTGTGGAAAT # Left flank : CTCATCACTGGCCGCATTCAGGAGATCTGTTACCCGAGAATTTGGCCAGCCAAACGATTAATGCATCCGCCCTCTCACCAGTTTCGCCAATTGATGATGAGGAGAGTCTTCGCTCGATCGTTACTCAAAATGGCCGCTATGAATATGATTGTTGTTTCTCACTCGATCAACTTGTCGTGGCATGGGACGATAATTGCTGTCAGTTCAAGTTTCCCGAGATTTATGATTTTGAAATGTTGCAGTCATGCATCAAGATGCTTGAGAATCAGTCCGCAGCGTTTCGTCTCCGCGGATTCTGGGTGAGAGCAACTCCTTCCCTCCCCTTGCACTCGTTTGCCGACTTGAGGCGATTGGGCGAAGTGCGGCGCTGGCCTGAAATGAATGGCTTCCTCAGACAAACTGCACTCTGGGAAGAGATTCGAAAAAATCATTCAGGTGGACAGAATCGAGGGTAAAAATTCAATGAATTTCACCCGATTTGCACTCACGCCACCCTTGAA # Right flank : TCGCTCGTCTTGCAAATCGTTGGGCGATCAGGGGTTACGGACTCGGTTTCGAGCGGTCGGGGATCGACCGTCGGATTGGAGGTGGCTCCAAGGGTGAGTCTGCGTAAGTCGTTTTGCCAAAGAGCGTTGCGATTGCGAGCGGGTACGGGGGTTTTGACGGCACGGACTCGCTCGATGAAAGTATTTTATCCCCCATCGGAGTGGCGAACAAGCAAATTTATCGGATTTCGGAGCAGAAGAATTTGCTGGAATTCAATTCGCTGTCGCGAGTTGCGGCGATGACGAGCGGCGGTGCGGGAGGAAATCTGCTCGAAGTTCGATTCCACTTCGGAAATTCATGGTAAGCGATTTTTTCCGATTGTATACTGCCCAGAAACAATCCGGAACGATCCCGGTCTGTTACCCCCTGATTGACCGCCGAGGCTCGACTACGATGGGCTATTTCAGCTCGTGGGAATTCATGCTCAGCAGTCTGCTGATCGTCGCGGAATTTGGAGCCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATTCGGCCACAGATTTTTGTCTGTGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //