Array 1 87334-84742 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPS010000007.1 Arcanobacterium phocae strain 12814 NODE_7_length_102597_cov_69.544294, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 87333 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 87272 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 87211 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 87150 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 87089 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 87028 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 86967 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 86906 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 86845 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 86785 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 86724 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 86663 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 86602 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 86541 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 86480 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 86419 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 86358 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 86297 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 86236 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 86175 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 86114 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 86053 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85992 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 85931 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 85870 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 85809 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 85748 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85687 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 85626 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 85565 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 85504 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 85443 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 85382 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 85319 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 85258 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 85197 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 85136 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 85075 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 85014 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84953 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84892 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 84831 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84770 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 43 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //