Array 1 74354-73349 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGGO010000003.1 Escherichia coli strain GU770, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 74353 29 100.0 32 ............................. CAACAGAGGCGGCAGGCAGTGCGACGGCTGCA 74292 29 100.0 32 ............................. ACCATCAGACGGTTTACGGTGCCAGAATTTGG 74231 29 96.6 32 .........A................... CCAGTGCTGGCGCGGCCTGCCGGGGCGTGTGA 74170 29 100.0 32 ............................. GATTTAACCGCCTTTTCAGTAATGTTTTTGTA 74109 29 100.0 32 ............................. AATGCGAACGTGCGGCACGGCGCCCGACACGA 74048 29 100.0 32 ............................. GTGCGATATAACAATAAAATCTACTACTCATT 73987 29 100.0 32 ............................. GAGCATTATATTTATTCGACGCTGACAGGCTC 73926 29 100.0 32 ............................. ATTCCGGGCGCTCCTTTTTCTGAGGCTGTTTA 73865 29 100.0 32 ............................. CCGGGGGATATTCTTGGGTCCGGCGATGTTTA 73804 29 100.0 32 ............................. AATGCGGGGTTTGCGCCAGCCGATAATGACCA 73743 29 100.0 32 ............................. ACCAGGGAAAGTGCCAGCCTCATCCTGTGTTA 73682 29 100.0 32 ............................. GTTAGCCAGCACACAACGTTGAGGCCATTACA 73621 29 100.0 32 ............................. AACTCGTTAGCAGTATCGTGGGGAGCGTAGAG 73560 29 100.0 32 ............................. CCATCAATGTTACACGTTAGGTCGATTGAACC 73499 29 100.0 32 ............................. GCAGGCTTGCCCGCATCCTCTTACACTCGCGG 73438 29 100.0 32 ............................. AAGGGGACGGCTACGGGAAGCCGCCTATTGAC 73377 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGCGATAGCGGTCACCGGGGACGCGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCGATCTGGCTCCTGGAAGTGCGTGCCGGTGTTTATGTCGGAGATACGTCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGGTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCTGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGACATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCTCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //