Array 1 300165-300391 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMWL010000001.1 Ruminococcus bicirculans strain D43t1_170807_A2 NODE_1_length_389250_cov_33.42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 300165 32 100.0 33 ................................ CACCGTGAATTTTATAAATCGTGCGTTCTGAGT 300230 32 100.0 33 ................................ GCGCACGGCAATGCCAATGCGGTACCCTACATT 300295 32 100.0 34 ................................ TGTAAGATAGTGATATATTCCGACTTGCGAAAAT 300361 31 84.4 0 ......T................-.G.C..T. | ========== ====== ====== ====== ================================ ================================== ================== 4 32 96.1 34 GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Left flank : GGCGAGCTAGATGAGTACCCGAACTATTTGCTGAAATAGAGGTGATATAAATGATGACCTTAGTAAGCTATGATGTATCAACAACAGATAATAAGGGTAAAACAAGGCTGAGAAAAGTGTCGAAAGAGTGTCAAAATTATGGACAGCGAGTGCAGAACAGCGTGTTTGAAATAGACGTAGACTATGGCACTTTTCTGAAAGTGAAAGATAAACTTCTGAAAATAATAGACCCAAAGCATGATAGTCTGCGGATATATTACTTAGGCAACAATTGGAAGCATAGAATAGAACACTACGGCACCAAAGAGACCTATGACCCCGAAGGCGTCCTAATATTTTGACCAGCGTACCCCAAGTGATCCACAAATCCCTAGTAAGTTCGCATGAAAATGCCATGCTATTTGTGAATGCACAGTGAACAAAATCAAATCGATACCCATTAAATAAAAAAATAAGTCCGCATCACGTTGAGCAAGCACCAGATATACACAACATCAAGG # Right flank : TTTCGTTTCAACGCAGGACTTATTGATATTGAATAATACAAGTAACCGCTTGACTAAGGTCGGGCGGTATTTTTATACCCAAATACTATACAATTTTCATGCGTTTTCCGTCAAATTCGCCAATTCACACCCCGAAATTTGTGCAAACAAATGATTTATAATTTAATTTGGCAACATTTCTGCAATTGTTGCATTTTTTCTGCAACAAAATACCCACTTTTCGTGTATAAGTAGAAGTGGTTTCACCACAAATCGGAAACCTTGCGGAGCGACAGTGTATGAGGAAACATTTTGTCAACGTGAGTTAGGTGAACACGATGAGAGGTTCTGATCGCACAAAAAAGCACTTCCTGCACTCCGTCTGAAGCTTGAAAATTGAATATTTATACCGAAACATCTTAGCTATACCCCATGAGCATACTGCTAAATTTAATTGTTATAACCGCCTTTGTTGACATTATTCATATAAAATGGTATACTTAAAATAAAATTTATACATA # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //