Array 1 1162576-1165108 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXQ01000001.1 Corynebacterium pilosum strain NCTC11862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1162576 29 96.6 32 ............................T GGGTAGAGACCGCGCTCAATAAATACGCCCGG 1162637 29 96.6 32 ............................T CCCACGACACGCACGACAATAAACCACATTAT 1162698 29 96.6 32 ............................T TTGGTTTCGGAGGTCGAGGACCTGGCGGGCGA 1162759 29 100.0 32 ............................. CACCCGCTTGCCACCACGCACAAGGCACAACA 1162820 29 100.0 32 ............................. TCGGCTATCTGTGTCCATTCCACGTTCACGGG 1162881 29 96.6 32 ............................G TCCTGCCACTCCAGAGGGTGGAGGAAGCCGCC 1162942 29 96.6 32 ............................G GGTTTTCATTGTGGTGTGTTCCTTTCGTGGTG 1163003 29 96.6 32 ............................G TCCGTAGGTACGGTGAGGTGCAGCCTCGCCCT 1163064 29 100.0 32 ............................. ACACCATCGTCATCAACCACCACACATGATTC 1163125 29 96.6 33 ............................T GGCAAAACGGTGAGAGCCGGGGTGAGGGGGTCA 1163187 29 100.0 32 ............................. AAATCCGAGGTGTGGGACGCGAACAAGGACCC 1163248 29 100.0 32 ............................. CCATTTCGCAGGCCCCTCACGGGTATCAGCCT 1163309 29 100.0 32 ............................. ACGTACGAAGAAGACGAAGTTGCAGCCATCGT 1163370 29 100.0 32 ............................. CATCGGCCTGGTCATGCAGGACGTGGCCGAAA 1163431 29 96.6 32 ............................T ACAACGGACGTCCACAGGCGCTTTGGGCTTCG 1163492 29 100.0 32 ............................. GCACCCGAGTAGGACAACCCGTGCAAAACGGA 1163553 29 100.0 32 ............................. ATCATCGGGTTCGACACCAACCACTTCGGCGA 1163614 29 100.0 32 ............................. CAAGGCGACCGCATCGCCCAAATCGTGTTCAC 1163675 29 100.0 32 ............................. CGGATTGTCACCGAAATGAACCAGGACTTCAC 1163736 29 100.0 32 ............................. CTGGCTGCTCCTTTTTCAACCGCCGAAGCTCC 1163797 29 96.6 32 ............................G TAGATGTCGTAGGTGGAGAAACCATGGCTTTC 1163858 29 96.6 33 ............................A GGCCGGGATGAAGATGGGGAGTTTGAAGAATCG 1163920 29 100.0 32 ............................. CTCGGCCAAGGACGACCAGGTGGCCGGATCAG 1163981 29 100.0 32 ............................. CCGAAACCATCACCCACCGACGACGCCCGAAC 1164042 29 96.6 32 ............................G ACCATTGAGCAGTCGAAAATTGGGCCGCTGAT 1164103 29 96.6 32 ............................G TCCTCGATTGGGCGTACCGCTACCAGCGATCC 1164164 29 96.6 32 ............................G GCTCGTCTGGCGTATGCAATGAGTCTGATCGA 1164225 29 96.6 32 ............................T AGGCTTCGCCCCGCACCGCCACCGCATCATGC 1164286 29 96.6 32 ............................G TGACTGGCAGATCACCGGAGACATTGCCGAAG 1164347 29 96.6 32 ............................G CGTCACCCACGAACCGGAATGAGTAAGTGAGA 1164408 29 100.0 32 ............................. TTGGGTGTTAGGCGCTTACAGCCGAGCCTATG 1164469 29 100.0 32 ............................. TTCACCTGGCACAACAACTAACCCACAAGGGA 1164530 29 96.6 32 .......................A..... TCGGCAACATTCTCAACATCATCCTCAAGATA 1164591 29 100.0 32 ............................. ACACGCTGAGCACCAGCCCACGCCTGCGTGGT 1164652 29 100.0 32 ............................. CGAAATATTCACACCCGCAAGCCGCGCCGTCT 1164713 29 100.0 32 ............................. ACAGAATCTTTCCTCTTCATGCACTACCGCCA 1164774 29 100.0 32 ............................. CACTTCGGCGACAGCGAAGCTCGCTGGCCGAT 1164835 29 96.6 32 ............................G CCATTGCGCATATACTGGTAAATGTAAGCAAG 1164896 29 100.0 32 ............................. GTGTCGGTGGATTTGTGGCTGCCTGGTGATGA 1164957 29 100.0 32 ............................. CCGTGAACGTTAACCTGCCAGAACCCCACATG 1165018 29 100.0 32 ............................. TAATCAGGCTATCGAGCTTTGCCTTAGCGTTA 1165079 29 89.7 0 ......................C.G...T | A [1165105] ========== ====== ====== ====== ============================= ================================= ================== 42 29 98.3 32 GTGTTCCCCGCGCTAGCGGGGATGAGCCC # Left flank : TTGTACTCTGACGTGGATCTAATCCTGTGGAGCGAGCTTGAAGTCATAGCAGCCGGCGTTAATTGGGGCGCTGATCAGCATTGATCGTGCTCATCGTAACAGCATGTCCCGCCGGCTTGAGGGGAGACCTGACGAAGTGGCTTATGGAACTCAGCCCAGGAGTTTTCGTTGGACGACCTTCAGCCAGGATTCGAGATTTGTTGTGGGAAAGAACAGTCGAATTGTGCCGTGATGGACGAGCTATTCTAGTTTTCTCGTCGGATAACGAACAAGGAATGGAGTTCCGCACACATCGTCACGATTGGGAACCGACAGATTTCGATGGAGTGACACTGATGGTGCGTTCTACTAAGAAACGTTCAGATGCGGCAAGCGGAAGCGGGCGTCGTACGGGGTGGGCTAGTGCGCGATTCCGTCGACGATGACTGAGACGTCCGAGAATTATTTTGAAGTTGAGTGTAAACTAGCATCCTGGCTCCCAAAAGCCCTGTTCATTAAGG # Right flank : TCGTATCCACTTACCTCTCGGCGTTAACCGCGTGATGCCACATGAGTTTCAACTGGCAACCCGCAATATAAACGCGGAGGGGTACGTACAGCGGCACGCATCGCGGGCCGACGAGAAAAGGCGACTAGCGCAGCGGGTCGAAAGGACGCAAGACCGGATCCACCTCGCCGGTAGCGATCTGCTTGGCCAGCAGCTTGCCGGATAGTGGGCCCAGAACGATACCCCACATACCGTGGCCGCCACACGTGTACACGTTCGGCGCCTTCGTCTCGCCGACCAGTGGCAGGCCGTCCGGGGTGACGGGGCGTGAGCCGACCCATTCGTCCTGGATGTCGGTCCAGTCGATGCCTTGGAACATCGGCTTGGTCACCTCGATGATGGATTCCACACGCGCTGGCTGGAAAGCCTCGTCGGGGCCACGGAACTCCATGGTGCCGGCGATCTGGAAGCGACCAACACGCGTCGGCGCAGGTGTGCACGCCACGCGAGTATGTGGCAGG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //