Array 1 427555-433259 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP085046.1 Corynebacterium sp. 20M1090 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 427555 29 100.0 32 ............................. ATGAATGGCACCATTTTCCAGGATATTGAAAA 427616 29 96.6 32 ............................T TGTCAAGCCGTCGCCGCAAATGAAGGAAGATT 427677 29 96.6 32 ............................T ACGCGCATCATAAAGAATCAATTTATCATTCT 427738 29 100.0 32 ............................. GCCGACTGGGACGCTACCTGGCGGAATTGGAT 427799 29 100.0 32 ............................. AAAACCTCGAATACCTAAAGCGTATCCCCGGC 427860 29 100.0 32 ............................. AATTTCCATGCCGGAACATCGGAAAGGTATGG 427921 29 96.6 32 ............................T CGGCGCATAGACAGTGCAGGCGTCTTCCAGCG 427982 29 96.6 32 ............................C GCGTTGACGGCATCTTCGCTGCGGTTGGGGTG 428043 29 96.6 32 ............................C TTTCGCCATTCCTCGTAGCCGAGCAGTGGCAT 428104 29 96.6 32 ............................T TCCGCCGCCTTGACGTCAGTCTTGAGCTTATA 428165 29 96.6 32 ............................A ATTTGTTCGCCTTCGTCGACGTCCCAGGTGAC 428226 29 96.6 32 ............................T AATGGGCCAATCATCAGAAGACGCCGGGGTAC 428287 29 96.6 32 ............................T GTATGTTGCCTAATTTCGGCCTCACACAATTC 428348 29 100.0 32 ............................. GAATACTACGACAAACTCAACAAATTCTACGA 428409 29 100.0 32 ............................. AACGGCCTGCCGCCCGCGAGCTGCTGGACTAC 428470 29 100.0 32 ............................. GCGCTTCCGATTTCGGCTCTGAAGTGAAATGG 428531 29 100.0 32 ............................. GCCCGTCACGAACGCAAAATGGCCCGAATTCA 428592 29 100.0 32 ............................. GTCAAGCGCCACATGGGTGGTGCTACTCAAAA 428653 29 100.0 32 ............................. GGTAACATCAGGTTTCCTGTATAGGCGGGTTG 428714 29 100.0 32 ............................. ATCCAGCGGTTTGGTGAGCAGGTGCGTGATGG 428775 29 100.0 32 ............................. CTGGCAGGGGTGTGCAGAGCAGTGTCGATGGC 428836 29 100.0 32 ............................. TATAGGGCTGCCCACACACGCTCGCCGACGTC 428897 29 96.6 32 ............................T ATGCGTCGTGTGCTCCACCGTCACCTCTTGGC 428958 29 100.0 32 ............................. AAAAGCACCACAGAATCGCCCGGATGTACCTC 429019 29 100.0 32 ............................. GACGACCTTGCCCTCGATGACCTGCGCATCGA 429080 29 96.6 32 ............................T GACTCCCATTCTCGCACATCTGCAAAGAATGC 429141 29 96.6 32 ............................T TTAATCTCGGTCAGCTGGCAGGACATATCCAG 429202 29 100.0 32 ............................. GCCCGCCCCCGGCCACGGTTGCGGATCCCCTT 429263 29 96.6 32 ............................T TTCCGCCCCAATACGGTCCCCTAGAAAGAAGT 429324 29 96.6 32 ............................T GTCACAAGTTAATCCAACTACCAGCAGAAACG 429385 29 100.0 32 ............................. CAGCCGGGCCGGACGATAAGCCGCTAATTGAC 429446 29 100.0 32 ............................. TCCCGCCGGGGCGGTACCCACAACCGAATACG 429507 29 100.0 32 ............................. ACACTCGGGAGCTGCTGTTTTTGGACTCTGCT 429568 29 100.0 32 ............................. GACGAGCAAAGTTTTCCTATTCCCCTGTATTT 429629 29 100.0 32 ............................. AGGCTGAAGAGCATTCGGGTAATGCTGGATTT 429690 29 100.0 32 ............................. CAACGGTCGCGGCCAATGGGTCGGCGCAATCT 429751 29 96.6 32 ............................T GCTTGTCCCAGCTGTTCGTCGGACCGCGAGCC 429812 29 100.0 32 ............................. GACGTTGCCGTCACGCTCGGTGGCGCGCTGAA 429873 29 96.6 32 ............................T TGTCGAAGTCATGCGGGCGGATATGCCATTTA 429934 29 96.6 32 ............................C CGTTTCGGCACCATCACTAACCAACAGCGGTA 429995 29 100.0 32 ............................. CGCATGGCAATTCCTAGGGAAGGGCGGAATTG 430056 29 100.0 32 ............................. TGCCCCATTCCATGCGGCGGTCACTGCATCCC 430117 29 96.6 32 ............................C GCGGAACCCGTTGGCCATGTATACGTTATTCG 430178 29 96.6 32 ............................T TGCAGGCATTGTGGGATGAATCGGCGGATCAA 430239 29 100.0 32 ............................. TCGCCCGGAATTCATATGAGGGCGCTTACCGG 430300 29 96.6 32 ............................T CCCTGGCGATGTAATCGACAAACTCGGGGCGC 430361 29 100.0 32 ............................. ACCACCACCCAAAAAACCGCCCACGGCACCAG 430422 29 100.0 32 ............................. TCTTCGATGCCCTTATTCGGGTCGTATTGTCC 430483 29 96.6 32 ............................C CAATTTCGTCACCATCCTCACCCACGACCCGA 430544 29 96.6 32 ............................C TCTGCTTGTGCCTGTTGCATGCGCTGGGCTGC 430605 29 100.0 32 ............................. ACTCTGCCATCGTGTCGGGCATCCTGACGATC 430666 29 96.6 32 ............................T TGTCGAAGTCATGCGGGCGGATATGCCATTTA 430727 29 100.0 32 ............................. ACTCCCCGGTGATCGGGTTCCTGCTGGACGTG 430788 29 100.0 32 ............................. ATCAAGCGCCACATGGGTGGTGCTCAAGCAAA 430849 29 100.0 32 ............................. TTCCCGGTCGTCAAGCTCAACAAGGACCAGGT 430910 29 100.0 32 ............................. TACCGCCCGGCCTATGCCACTGTGGTGGAATC 430971 29 96.6 32 ............................C TCGTAGACCACACCGGACAGTACATCCAGGTA 431032 29 96.6 32 ............................C TAAGTTGGAGTCGCTGCGCAAGAACGCCAACG 431093 29 96.6 32 ............................T GTCCTGGCCCTTCTTGTGGATCTCGGGGGACA 431154 29 96.6 32 ............................C ACGCGCCGTGCTTTCTCCACCTCATCCAGTCC 431215 29 96.6 32 ............................T GAGTGGGTCAATTCGGTCGAGGGATTTACCGC 431276 29 96.6 32 ............................T CAATTTGTCATTCTTGGACCGGCCTTCCTCTT 431337 29 100.0 32 ............................. TCACAACCGGACGGCTCAAAAAAGCCGGGTAT 431398 29 100.0 32 ............................. GCAGTATCGAAGACCGGAAGCAAAAGGCGTTT 431459 29 96.6 32 ............................T CAGTATCCGGCGGGGCAATACGCGCATCATAG 431520 29 96.6 32 ............................T AATTCGCGGCGGCAAGGGCACGCCCAATTGCG 431581 29 100.0 32 ............................. CCCTTGTCATTGGCATGGGAGACAATACGCAC 431642 29 100.0 32 ............................. TGTCACCTGCGGTTGTACCGGTAGGGGGTGAC 431703 29 96.6 32 ............................C CCACGAGCACCGCACAGTAGCTATCCCCCGGG 431764 29 96.6 32 ............................T GCTCAGGTGCGGATGCTGGCGCGCGTGGCGCT 431825 29 93.1 32 .....................T......T TTCTCGGGGTCGACACCCAGCATAGTGAGATA 431886 29 100.0 32 ............................. CCGCCCGCCTGCTGGGCCTGACCCGTAACGGG 431947 29 100.0 32 ............................. CGGCCGGGCCTTCCAGCTCCTTGGCACGCTGG 432008 29 100.0 32 ............................. AACAAAATCGGTGCTGTAATTGAGGAAGCGCG 432069 29 96.6 32 ............................C AATAAGAACGGCCAGCTGGTGATGCGCAGCAT 432130 29 96.6 32 ............................T ACACCGGTGATGGGTGGAATAGGGAGACGCTA 432191 29 96.6 32 ............................T AAGGCGGGCGACAAAGCCCAAGACGTCTGCCA 432252 29 100.0 32 ............................. TCAATCACGCCACGGATGACGGCCATAATCAC 432313 29 100.0 32 ............................. CGCGCGCCCCGGCACCAGTAGGCGACACAACG 432374 29 100.0 32 ............................. ACGACCGCACTGATGGCGTTCGGCATGGGTAC 432435 29 100.0 32 ............................. ACGACCGCACTGATGGCGTTCGGCATGGGTAC 432496 29 96.6 32 ............................C TGCGTGCCGTCGGGCACATAGCCCGTCGTCGG 432557 29 96.6 32 ............................T GACCACCCCGCTGACCATCACCGCCTACCTGG 432618 29 100.0 32 ............................. CCCCACAAACGGCGACTGAGACATTCGTGCAA 432679 29 96.6 32 ............................C CCCATCGCGGGCCCCTCGGCTTTCAGGGCGTT 432740 29 100.0 32 ............................. CTCTGTGCGTAGCAGCCCGCGCGTGCGACGAC 432801 29 100.0 35 ............................. CGCTGCGATGATTTCGTCGGGCATCGTCTCTGCGA 432865 29 100.0 32 ............................. GGCTCGTATGCCACGAATGCGGGACCACCTGC 432926 29 100.0 32 ............................. CGTGTCCAGGCGATCACCGACGGGCGGATCAC 432987 29 100.0 32 ............................. AGATCGACTTCCTTAGTCTTGACCTGCCCGTG 433048 29 100.0 32 ............................. GCCTACACCCTATCCTCGCTGATCGCCTTGCG 433109 29 100.0 32 ............................. TTGCCGTGCAGGCGGATCAGGTTCAGGAACAG 433170 29 100.0 32 ............................. GAACTGGAATCCGCAAACACGTCCATGCGGTG 433231 29 93.1 0 ...........................TC | ========== ====== ====== ====== ============================= =================================== ================== 94 29 98.4 32 GTTTTCCCCGCGTAAGCAGGGATGAGCCG # Left flank : ACCGCCTGTCCCGCAGGATTACGCGGTGACCTAACAAAGTGGGTCATGGAAATCACCCCTGGGGTCTTTGTTGGGGACCCAAGCGCTCGAGTACGCGAAGAAATCTGGGAGCGAACAACCGAACTTTGCAAAGACGGTAGAGCGCTACTCATTTGGAGTACAAACAACGAGCAAGGAATGGAATACCGCACCCACAGGCATGACTGGGTCCCCACCGACTTTGATGGACTGACACTGATGATGCGCCCGCAGAAGGATCGCCAGGGCCCAAAGTATGGGCAGCGAACCGGGTGGAGCATTGCCAGAAACGCGAGGCGGCAGCGCAACCGATCCTGAGTTCGCCGGGTGCTTATGTCGAGGACCTAGAAGACGAACACGTCCTCGACTGAGCTCTCTTGCCCTCGATCACGTACCAGTTGAGGGCCGCCGACGGGACTGGAGCTGGAAGCAAGTTATATCTAAACTGGGGTGAGGCTCTGCATCGGCGCTGGTCGCCGAGT # Right flank : CCAAATTTTTGCCGTATGCCGAGTCCCCATAGCTCTCTTTCGCCAGCAGGGCTGGGGCCGGTGTGGTGGGATGATGGATCATTTACTGAAATCAGTTATCTACCTTAATTATCTGTTTACACCATGTGGCCAAAACAGGAACTAGTACGACTCTCTGTGGGCTGCCTCGCGAAGGGAGAATATATCTTCGTTGAATAATCTCAAGTCCAAGACGAAGGAACCACAACCTTCATCAATGTAGAATCGTGTTGAAAAGTAGAAAGTAAACCAACCAAAGCAGTATTAATTTAGAAGGGGAAATTCTATGGAGATCATCCCGGCAATTCTTACCATCATGTCTTCGGCGTGTGAAGCTCCCGCTCCTGTCACTTACGCCCTAGCTGCCGTGACTGTATTCTTCCTTTCCAAGGAGACGTTCACCATGATTCGTACGTATAACGCTTCCAAATAGTAATGCCGACTTCGATCAGATGATGTTCCTCAACCCACCACCCCAGCAG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTAAGCAGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //