Array 1 1513069-1511664 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_017866.1 Bifidobacterium animalis subsp. lactis B420, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	====================================	=======================================	==================
   1513068	    36	 100.0	    37	....................................	GACGATATGGCGCTCAGCGTGGCGGAGTGGGAGGCGG  	
   1512995	    36	 100.0	    35	....................................	AAGACCGGCACCGAACGCGACTTCACCATGACCTC    	
   1512924	    36	 100.0	    39	....................................	GCCCACCACAACGGCAACGGCGGAGGAACACGCGCCGAA	
   1512849	    36	 100.0	    34	....................................	AAGCCGAACTCAATCACACGCATCAAAGCGAACA     	
   1512779	    36	 100.0	    38	....................................	GTATTCGCCGTTCGAGAGGAATGAGAGGATGCTGTCAG 	
   1512705	    36	 100.0	    34	....................................	TCGCCATTGGAGACGCGACGCAGGATACTATCCG     	
   1512635	    36	 100.0	    34	....................................	ACGACAAGCCGCCGCCACCGATATTCACCTGCGA     	
   1512565	    36	 100.0	    38	....................................	GGCCGCTTCGGTGACGGGCTGGTTTTTCCACCACACGC 	
   1512491	    36	 100.0	    34	....................................	AATCCCAGCCGCAAGGTCTGATGCCGCCTGAAAT     	
   1512421	    36	 100.0	    35	....................................	AAACAGGTCAATCAGCGGCGCAGGGAGGAGACGAA    	
   1512350	    36	 100.0	    36	....................................	GAGTGAACAACTCACTGTGCGAACCATCGAACCGTT   	
   1512278	    36	 100.0	    36	....................................	CGGTTGAGCAGCCACGTGGTGATACTGCTCGCGCCA   	
   1512206	    36	 100.0	    38	....................................	CTTGCATCCAACGCGCACAGCATTGCATACGGGTATAG 	
   1512132	    36	 100.0	    39	....................................	ATCATCCTCACGGAAATAGTGAGCATCCTCGAGAACCTG	
   1512057	    36	 100.0	    36	....................................	GGCCGCGATAGTCCACGAGGCGAACGAAGGCGTTGC   	
   1511985	    36	 100.0	    36	....................................	GCTCAAGACACTCACCGACCAGCTCAAGAAGACCGA   	
   1511913	    36	 100.0	    36	....................................	CGCGATCGTCACCGACTGCACTGTGTTCGCACTGTC   	
   1511841	    36	 100.0	    35	....................................	GCGACACCGAACGCCGCCGCCACAGTCGGGATGGC    	
   1511770	    36	  97.2	    35	...................................A	AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC    	
   1511699	    36	  91.7	     0	...........T.T.....................A	|                                      	
==========	======	======	======	====================================	=======================================	==================
        20	    36	  99.4	    36	ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG	                                       	       

# Left flank :   ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAGGTGCTGGGTGTGGGCGATGCGCTCGCAGACGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT
# Right flank :  ATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGATT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.10,-7.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.78   Confidence: MEDIUM] 

# Array family : NA
//