Array 1 577738-578768 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GL872408.1 Streptococcus sanguinis SK115 strain CCUG 59320 SCAFFOLD1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    577738	    36	 100.0	    30	....................................	AAAATCTTCATCATAAACGAGCCAAGACAA 	
    577804	    36	 100.0	    30	....................................	AAGCTTTGAATCGTCATATACAGCTGTTTT 	
    577870	    36	 100.0	    30	....................................	TTTAAAGTGTTTGAAGTTTTATAGGTTTTT 	
    577936	    36	 100.0	    30	....................................	CTTCAATAAGCTGAGGAAGTGCGTCAATAA 	
    578002	    36	 100.0	    30	....................................	AGTTCAAGACAGCTTTCATACCAGAGACAC 	
    578068	    36	 100.0	    30	....................................	TATATGGGGGACTAATGGTTATGCTCCGCA 	
    578134	    36	 100.0	    30	....................................	TTTTTGAAAAAAAGAGATGTAGATTAGTGA 	
    578200	    36	 100.0	    30	....................................	GATACTGTCCTGGATACCATCTGACCCAGT 	
    578266	    36	 100.0	    30	....................................	CAAAAAATCGATTACCATTGCCACCATAAT 	
    578332	    36	 100.0	    30	....................................	ATTCACTTTTTTTAGTAAGTCCTTGCTGAT 	
    578398	    36	 100.0	    30	....................................	CCTTGTAAATAGGTTTCGTATGGTCTGAAA 	
    578464	    36	 100.0	    30	....................................	CCCAACCTCAAAAGCAAACCTGTTGCTTAC 	
    578530	    36	 100.0	    31	....................................	CTATATTCATCGAATAAATTACTATCTCTAA	
    578597	    36	 100.0	    30	....................................	TCTTCTTCTCCTCGTACCAGCCATTTATCC 	
    578663	    36	 100.0	    30	....................................	TAACCATTTTTAAGAAGCCATTCAGTGATG 	
    578729	    36	  83.3	     0	......................TT.AC..T.....A	|                              	TT,A,T [578751,578760,578764]
==========	======	======	======	====================================	===============================	==================
        16	    36	  99.0	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   TCAACTAAATGATAAACCAGAAGTAAAGTCAAAAATCGAAAAGTTGTTAGTTGCGATTACAGAACTGCTGGGGTTTGAGTGTTTGGAAAATGAATTGGATCTAGAGTACGATGAAATCACCATTCTAGAGTTGATCGATGCGCTAGGAGTCAAAGTTGAAACTCTGAGTGACACACCTTTTGAAAAGATGCTAGAAATTGTCCAAGTTTTTAAATATCTTTCAAAAAAGAAACTCCTTGTTTTCATCAATGTGACCGCCTATCTATCAAAGGATGAGTTAGGAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTCTTATTTGTCGAACCTCGGAAAGTCTATGATTTTCCGCAATATGTGCTTGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATTAAGAGTAACAATTGGAATCTGGCGAGCTGAAGTCTAGCTGGGACGAATAGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG
# Right flank :  AAGGACTGTTTTATTCAGTCCTCTTATTTTCTATTTCCCTAGGCAGAATTGGCTGAAGAGTTGGGTGATGAGCTCGTCTGGTGCAGCGTCGCCAGTGATTTCGCCAAGGATTTCCCAGGTGCGGGTCATATCGACTTGGAGTAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGACTTTCCAGAGCTTTTTCGATCAAGGAAATGTGACGGGCGTTGGACAGGTAGGTAGCGTCTTGCTCGACGATACCAGCATTTTTAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATTGATATTTTGATTGTGGAGGACAGAAATCTTGATAGCATCTGCTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAAGACGATACGATTGCTATCTTGACTGATTTCGAGCAATTGTTTGTCCTGATCCGTCAGAAGCTCGCTGGCGTTTAAAACTAATAGAACCAAGTCAGCTT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//