Array 1 3193-3360 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGHE01000086.1 Streptococcus sobrinus TCI-374 contig00086, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3193 36 100.0 30 .................................... TTATTGCTGGATTAGTTGGAAGTCTTTATC 3259 36 100.0 30 .................................... CAACTAAACTTTCTTCTGGCACGCCCGTTG 3325 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ACTCTATTCGAAAAAATGTTTGAAATACTGCAAGTTTATCAATATCTGGTAAAAAAGAAATTACTAGTATTTGTTAATAGTCTGTCTTATTTTAAAAAGAGTGAGATTGATAGACTGATTGAATATATTCAGCTTTCCAATCTTAGAGTACTTTTTATAGAACCAAGAAAGATTGAAGGTTTTCAACAATATGTTTTAGATGAAGATTTTTGCTTGTTGCTTGATAGTGGTGTTAAAGCTGAATAAGTTGTCTTAGGTTTTTTAGAGCTTAAACCGAACCTGTGCTACAAAGTTCACCGACGATAAGAACCTCAAGGAATTAGATTATTATACTTTCCAATTTAAGTACAACGAAGCTGGTAATTGTTGAATTAAACTAGTTTCTAGGGTATAATCGAGCTAGCTTTAAACTAATATAATTGGAATTCTATTCGAAACTGAAGTCTGGCTGAGATGAATAGTGCGATTACGAAATTTCGTGAGAAAAATTGGTCCACGAG # Right flank : CAGAATCCGTCTGAGAATATGCAGATGGAAGGTTTTAGAGCTGTGTTGTTATAAAAGAGACGGTAATTCTTATACACCAATCCCTTCAGAGGGATGAAGTATTTGAATATCATCTCTTTTTATTGTCCAAACCTTCTTTTGTTGCTATACTAGACTTATGATTGACAAGGAAGGAGACATCTTATGAATATATCCTATCATAAGATTGAGGCTGATGAGGCTAACCGTAGTCAATATTGGCAGGTGGCATTTGGTCTGCAAAACTGATGGGCTTCAGCCTTCTAGCTACATGAAGAATTTGGCTCGGAAACATATTGCCAAGGAAATTGATTTTCCTAAAATCTATGCAGAAGTAGAGAAGTATTATCAGGACCAATCGGATAAGTTGCCTCCTAGAAGTAAAGAGGCTGACCTTGTTTCTGCTAGGATTGTTGAATATTTGGAAGAAGCTAGCTTAGGTTTTAAGCCGACTCCCTATAGTTTAAAAAATATTCATGCCT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 9576-11855 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGHE01000001.1 Streptococcus sobrinus TCI-374 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 9576 24 100.0 37 ........................ CAATACGACCAAGACTTGGCTAAGTACAATGAAGTTT 9637 24 100.0 37 ........................ TAATACAAGGAAAGATAACTCTGGGGAATATAGGTTT 9698 24 100.0 37 ........................ TACCGTCCTGAACCATACCACTTAGATACTCGTGTTT 9759 24 100.0 37 ........................ CAGGGCTACGGACTTGATATCTTGATAAAAGATGTTT 9820 24 100.0 37 ........................ CTACAATGTGGTTTCCGTGGGGGATGTCAGCTAGTTT 9881 24 100.0 37 ........................ TACCTTTAAGAGCGCCGTCCAACAGTCTAAGACGTTT 9942 24 100.0 37 ........................ CGCCAGCCATCAAAAAGCAGATGGCGAAGCGAGGTTT 10003 24 100.0 37 ........................ TGCATTAGAAGCCTTGAAATCCCAACTTGATGTGTTT 10064 24 100.0 37 ........................ CGCGCCATAGAACAAAAGAACCTGTACTCCAGAGTTT 10125 24 100.0 37 ........................ CAGCTAAACCGTTAAGAAGGAGCTGGGGGTAACGTTT 10186 24 100.0 37 ........................ CGAGGTTTGAAAAAGTGGGAAATTGATGAAACGGTTT 10247 24 100.0 37 ........................ TGTTTCTCTAGCACGTTTTGTAGTATCTTTAGAGTTT 10308 24 100.0 37 ........................ TAGTTATTGGCTTGCCCTTTGTAAAACCTTTTAGTTT 10369 24 100.0 37 ........................ TATCCCATTCATCTTTTGTAATTGGTGCCCCATGTTT 10430 24 100.0 37 ........................ TATCCCATTCAGCCATTTAAGGTCATAATCAGAGTTT 10491 24 100.0 37 ........................ TGCAAGGCTGTTTTTTGCACGACTTTTAGCAAAGTTT 10552 24 100.0 37 ........................ TAAACATTGGCTTTAGTGCCTGATAGATTTTTCGTTT 10613 24 100.0 37 ........................ TGCGGTGACTATAAAACGCATTGAGGTTTTGGAGTTT 10674 24 100.0 37 ........................ TAATAGTTCTAGAAGAGCTCAGAGCAATTCTAAGTTT 10735 24 100.0 37 ........................ CGCCTTGCAGCCATCCCAAGGCCATGGGGAAGCGTTT 10796 24 100.0 37 ........................ TAGTTATTGGCTTGCCCTTTGTAAAACCTTTTAGTTT 10857 24 100.0 37 ........................ CAACCTCACTCCATATTTTTTAGAAAACGAAGAGTTT 10918 24 100.0 37 ........................ TAAGGCAGGCACTAAAGGTCTGCTAAAAAAACTGTTT 10979 24 100.0 37 ........................ TATGCTCAAGCGGCTGAAGGTTGATTACAACAAGTTT 11040 24 100.0 37 ........................ CTAGGAGGGAAAAATAATGGCAAAAAAACAAGAGTTT 11101 24 100.0 37 ........................ TTGATGAGTTGGATTCTGAATTATACTCCAAGAGTTT 11162 24 100.0 37 ........................ TTGATTCCAACGAAAGAATACCATGGAATGATGGTTT 11223 24 100.0 37 ........................ CTGAAATCCATGAGTATTTTGCTGATTTTATCAGTTT 11284 24 100.0 37 ........................ TTCATGAATAATATTTTGGATAATAAGACCATGGTTT 11345 24 100.0 37 ........................ TAGTAACTTTAGTTCTTCTTGCATCTCTTTGCCGTTT 11406 24 100.0 37 ........................ TACTATCTTTGCCATTAAACAATTTGACACGATGTTT 11467 24 100.0 37 ........................ TACAACATAATCACAATCTTTTTCAATCCGAGCGTTT 11528 24 100.0 37 ........................ TTCATCAGAGTCCAGCTTAATCCACTTGACATCGTTT 11589 24 100.0 37 ........................ TACTTAACTAAAATCAATACTTTACAAGTTAGAGTTT 11650 24 100.0 37 ........................ TCTGTATAGTCATAACTGATAATCAGTCCCCTAGTTT 11711 24 100.0 37 ........................ TGTTACGGCGTGTCCGCTCTGTACTCGCAACAGGTTT 11772 24 95.8 37 ..........T............. CATGTAATTGGTGATTAGTTAAGTATTCGTAAAGTTT 11833 23 75.0 0 .......-T....A.A...A...A | ========== ====== ====== ====== ======================== ===================================== ================== 38 24 99.2 37 TACCCGCACACGCGGGGGTGATCC # Left flank : ATGAACATACTATCATAGAAATTGCTGCTGTTAAAGTTAGTGGCTTACAGATAGAAGAATTTGGCTATCTTATAAAATATGATAAAGTTTTACCGAAAAATATAGTCTCTCTAACGGGAATAAGCCAAGAACTTTTAAATCAGAATGGAAAATATATTCAAGTTGTACTTCAGGAATTTCTAAATTTTATTGGAGATTTTGACCTTGTTGGTTATGGAGTGGGATTTGATATTAAGTTTATCAATAATGAGTTAAGAAAATTGGGCTATCCTTTATTGGAAAATAAAGTACACGATTTGATGAAATATGTTAAAAACGAAAAGTTGTTTTTAGATAATTACAAACTTCAAACAGCCTTAAAAGCATATGGAATTGAAGGAGAAGTGCCTCACAGAGCTCTCCCGGACTCTCGACTTATCTATCAGCTGTCTACCAAAGTGAATAAATTTTTGAAAAGGATCAATCAGAAATAGCGGTTTTATTGGGATCTTTTAGTGTTT # Right flank : ATAAGGGCAATAATAACTTTAGGCATCTGTAAAAAATTGTTTTATACACCTAAAAAGAGTATAATCGGTGTATGAAAAACAAGTGAGGTGCCAAAATGTCTAAAGTAAGATTAAATGTCAATATTGATTCCGATGTGAAAGAAAGGGCCAGTCAAGTCTTTTCTAAATTGGGACTGGATATGACGACTGCTGTCACTATTTATCTTAATCAAGTGATTCAAAAAAATGGTATTCCTTTCGATTTGACGCTCGAAAAGACACATTATACCGCTGATGAGATTTTAGGGCCTGATTGGCGAGAAGGGCTTGATGCAGTTGAGGATGAGTGGGAATGACTTATCAGATCGAATTTACCAAGGAGTCTGCCAAGGACTTAAGGCGATTAGATAATAGTCAGAGGATTCAGATTCGTAAATCTCTTGTTAAGCTAGAAACGCTTGGTATGGAAGCTGGTCAGGCTTTACATGGGGCATTATCTGGTTGTCGTAAATTAAAGCATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //