Array 1 546684-546956 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047019.1 Streptomyces sp. ST1015 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 546684 29 100.0 32 ............................. GGATCGGTGCCCTCGACTCCTTCCGGATGGAT 546745 29 100.0 32 ............................. CGCTCCGTCTACACGGTCAACGTCGAGTACCG 546806 29 96.6 32 ................T............ GTGGCTCCGCTCGGCGGGCGGCCCTGGTCGTC 546867 29 96.6 32 .....................A....... GCGCGGGCGGTGTCGATGGCGGCCCCGTAGTC 546928 29 96.6 0 .........T................... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.0 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CCATGCGTTCGCATTAGCTAAGTCAACATTGGCCAGGTTGCGGATCGGACGGCACTCAATCATCTCGACCTCTACCCAGAAGGCAGAAACTGCGAGCCCTGCGGACACCAAGGACGATCTGAACTTCGCCCAGCAAACGTCCATGCCGACGCCCGGCAGGCCGGCCCGAACTCCCAACCGTGCAAGCTTCGAGGGCGCAGCCCAAGACCCCCGTCTGCAAACCCCGGCGCCAACAGCGACCCAGTCCAGCCACACCCTCGAAACAACCCCTGGCGACCAGCAGCGTTCCGTACGATTGACATCTCGACGCCGGGGAGACCAATGCCCTTCACGCCCGCGACCAGCCAGCACGCGAACCACAACAACCAGCACTGCGTCACCAGCACCAGCACTCCCCACCCCCCTCTTCCAGCAAGCCACCACCAGTGACCAAAATGTCCGTTTCTCTACAAGTAACGAAAAACAGCCCAGCAGCCAGCTAAAGCCCCAGCTCACGCACT # Right flank : CGCGGTGGCGATCATGTCTTTGGGCGCGGTGGCGACTCTGCTGCTTAGTTCGGTGTCCTGGCGGCGAGTTGGTGGCTGAGGTGCGTAAGTCTGCTAGGCCGGGGTGTGAAGGGTGGTTGGCTGGGGTTCGGGTGGGCGTCGAGGCGGATGATGTTGACGGCGGTGGTGGAGAAGGCGTACTGGAGGCGGACCTTGGGCAGGCCGTGGTAGCGGGCCCGGCGGAGGCCAGTGACGTCGAGGGGCTGGTTGATGGTGCCCTCGGTCCCGGCGCGGAGGGCGTATTTGGTCTTCCAGGTCTTGGTGGCCTGCTCGGCCTGGGCTTCGGTCAGGGTCTCGTGGAGTTCCTTCGGGCGGAGGCTGAGGGTGCGGGTGCCGCGTGCGGGGGTCTTGCACTTGTCCTGGACGGGGCGGGCATGGCCGTCGGTGCGGGCGAATTGGATGGCGTCGCGGCCGTGCTGCCGGGCGGGGAACCAGCCGGTGCTGGTGCGGACTTGCGGGCA # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 754114-753718 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047019.1 Streptomyces sp. ST1015 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 754113 29 96.6 32 ...........A................. ATGCCGGGGACGACTTCGGTGGTCCAGCGGCT 754052 29 89.7 32 ..........TA......A.......... TCCTTCCAGATGCCGCCCGTGGCCTGCGACGC 753991 29 100.0 32 ............................. CGCTACGAGTTCACCGGCACCCTCACCCCCGC 753930 29 100.0 32 ............................. TCGGTGGGGGTCCAGCGGCCTTGGCCGGTGGT 753869 29 100.0 32 ............................. ATCCGGCCCAAGGCGCAGACCGCGCTGGAGAT 753808 29 100.0 32 ............................. ACGTACAGCGCAACAGGGTCGGACTGGCTCGA 753747 29 82.8 0 ...........A.........T..TC..C | A [753723] ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.6 32 GTGCTTCCCGCGGACGCGGGGGTGAACCG # Left flank : CGATCTCTACAAAGCCGACACCACCCTCCCCCTCGCCTTCTCCCTCCACCAGTCCACCGACCCCGAATCCGACGCACGCCGCGCCTTCCGCGAGAACCTCCGCCTCATCAGACTCCTGCCGCGCATCGTCCACGACATCCAGACCCTCCTCACCCCCGCCGCCGACAACGACGACATCGAAGACGACGACAACGCCCCCGAACACCGCGACATCCGCCTCGTCCACCTCTGGGACCCCAAGACCGGCACCCTCCCCGCCGGAGTCAACTACGCCCCCACCGGAGACTGAGCGATGCCCTCCATGTTCGTCATCGCCACCACCGCCGTCCCCGACCACCTCCGCGGCGCACTCAGCCGCTGGACCACCGAAGTCATGGGCCCCGACGCCGGGTGCCCCATGACTTCGACGGGCTTGCACTCATGCGGATGACGGGGATACCTACATCGTCGAGCATGGCAAAGGGAGGCTAAGGTCGGTCTTGAGGTGCAGGTCAGGGAGA # Right flank : TCACGAACATCTGGGGCCCGGCCGTCCCGGAAGTCTCCCGGCGTCTCATCCCCAACTGATTGCGCTAGGCGGGGATTTGTCGGCGGCGGCACTGCGTTGAGCGGCGGGCAACCGTACCGCGTCAAGCGCGAGGGCATCCGCAGCGCGGGTAAATCAAGACTTACCTTTGCGGGCTCCCACCCCCATAGTGGTGAGCCGCACCCAGAGGAGGCCCCCCGTTGTCGCAGATCAGCGACGGTCCCGCGCGTCAGGTGAAGGCGCAGCAGGCTTACGTGTCGACCATGTACGGGCTGTTCGACGAGAGGGTCGCGCAGGTCCGGGCGCAGCTCGCGGCTGTTCTCAAGGCGCCGGCCGACGGTGGGCGCGAGGTGTACGAGCGTGATCTTGCCGCTGCCCGGCTCGCCGGGGAGATTCGGCGTTATGAGGCGGCCGAGAGCGGCATGGTCTTTGGCCGGACCGACGCCGCAGACGGCACCGCCCTGCATATTGGGCGCCTCGGC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTCCCGCGGACGCGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCGACGCGGGGGTGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 763400-763962 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047019.1 Streptomyces sp. ST1015 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================== ================== 763400 29 100.0 32 ............................. ATCGTGGCTGACGGATTGTCGGCGGGGAGGGG 763461 29 100.0 32 ............................. GCAATCGAGGAGGCGCGGGAGCGGGAGGCGCA 763522 29 96.6 78 .........A................... AAGCGTGACGGCCTGATCTACAAGGCCGTGCAGCGGGGGTGGTTCGACCAACCCCCTGCCCAAGCAGCAGGACCGGAG 763629 29 100.0 32 ............................. CTTCGCTTTCGCACGCCAGGGATTCCGCACAC 763690 29 100.0 32 ............................. TCGCTCTCCGACAAGGCGGGCGGGACGCGGAC 763751 29 100.0 32 ............................. AACCCCTTGCCCTGTCCGCGGCGCATGGCTCG 763812 29 96.6 32 ...................A......... CCCGAGGCCAGGACGATGCTGGTGATCATCAC 763873 29 82.8 32 ...............A.A..AT..A.... AGACGCTGGGCGGGCGCATCCAGCGCCCGGGC 763934 28 86.2 0 ................T...A.-.....C | G [763959] ========== ====== ====== ====== ============================= ============================================================================== ================== 9 29 95.8 38 GTTCTTCCCGCGCCAGCGGGGGTGGTTCG # Left flank : ACGGCCCATGTCCTGCCGCAGCACCCCACTCAGCCCCTCACGGCCCCGCACATCGCACAACTGGAACCCCGACGCCTTCCCCACGTCGTGCAATCCCGCACACAGCGCCGTCACCCCACGCGCCCGCTCCAGATCCCCCGCCACCCTCAACCCACGAGCGATCGCCCGCCGCTGAGACACCGACAGATACCGGTCCCACAAGAACAACGCCATCGCCGCCGCGTCCAACAGATGCCGCACCAACGGATACACCGGAAAAGCCCGATCCAGCCCCCGTGACTTCCCCCAGAGCGACTCGTCCACCTCCACGACCGGCCTCCCCATCACGCTAAACTCCTGCTCCCTCGCAGCTACTCCGACGACCGACGACCCAACCACAGCCCACCGACACCCACACACCGCACGCCGCATTCAGGCCGGATCGACGACAAGGACGACCGAGTGCCGACAGATCTAGCAAAGAAACGGAAAAGGGGTTACTGAAGCCCAGGTCAGAAAGT # Right flank : CAGTGAACGTGGGCCTCGGCCTGCGGGAAGGTCGAAGGGACAAGACGGGCGGCCCAGGGCGAGGTCGCCGTCCTGGACGATGTCAGCGTTTGCCGTGGCCTTGCTCGCGGAGAGGGTGTTGTCGTTGGTGTCGAGGCGGTTCGTCAGGCACCGTTCGAGGCGGAACTGCGCATGCAGGAGCGGGCCCAGTCGAGAAGGCGAGTCATCGGGGCGTCCACAATCAGTCATCTATGTGTCAAGGGCCAGCGTTCAGCCCTCAGTCACATCAGGCGCTCGCAGCAGCCGCAGGAACGCCTTCACCCCCGCGATGATCTCCTTGTTGTCGGTGAGCCGGTTCACCGTGGACTCGAACTCCCGCCCCAGCGCGGTGAGCCGGCGGTCGGTGTCCTCGGCGCGTTCGTAGGTGACCATCGTCAACGCGTCGACCGTGCGCCGCAGTTCGGCGAGAGACCGGTACTGTTCCTCGGCCTTCTCCGCCAGGACCTTGTGCGCGGCCTCGG # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.42, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCCCGCGCCAGCGGGGGTGGTTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.70,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 3931906-3933769 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047019.1 Streptomyces sp. ST1015 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3931906 29 100.0 32 ............................. ACGCGCCACCGTGGCAGCATCGCCCGCCTCGA 3931967 29 100.0 32 ............................. TGTCCATCTCCCCGAGGGGGCTGAAGGCTCAT 3932028 29 100.0 32 ............................. ATCGCCCGCGCGTCGTTCTCGGAGGTCACCGC 3932089 29 100.0 32 ............................. TACCTGCACGGCGCGCACGTCGGCGGCGCCGA 3932150 29 100.0 32 ............................. GACCATGACGACGTGCTAAGGCCACAAAATCG 3932211 29 100.0 33 ............................. CGGGACCCGAGCCCGTCGAACAGCGCGTCCTGG 3932273 29 100.0 32 ............................. CGGTAGTCCACGACGTCCACCGGGAAGGTCGG 3932334 29 100.0 32 ............................. CTGGGCGACCTCGCACGAATCACCGCCCGCCG 3932395 29 100.0 32 ............................. TGCGTCCCCGCGCGGTCGAGGATGCACACCGC 3932456 29 100.0 32 ............................. CACGGCGATCACCTGCGGAAGCTTGCCGCCCT 3932517 29 100.0 32 ............................. GCTCTGATCCGCCGAGCAGCGGGCCGGGGCTG 3932578 29 100.0 32 ............................. CACCGCCACGAGCAGTTGCACGCACGCCTGCA 3932639 29 100.0 32 ............................. CGCATGTCGAACCTGTTCATGGACGCGGCGCG 3932700 29 100.0 32 ............................. GCCTTGGCCTGGTCGATGAGCAGGTCCGTTCC 3932761 29 100.0 32 ............................. GGAGAAGAAGCTTTGCGTCAAGTTCAAAGGCA 3932822 29 100.0 32 ............................. CGCAAGCGCATCCCTATCAACCCTGAGGCCGA 3932883 29 100.0 32 ............................. GTGTCCACGGCCAGGTCGCGCGCGCTGGTTGC 3932944 29 100.0 32 ............................. AGATCGGCCGCGCGGCGTGTGTTGAAGCAGTG 3933005 29 100.0 32 ............................. GTCCTCACCGCGTCCGCCGAATCCCGCCCCGC 3933066 29 100.0 32 ............................. CCGGTCGGCAGGCCCATCACGACCTCGCCGTT 3933127 29 100.0 32 ............................. TGGGGGCGCGGCGCCGCCTACGTCGTTGTCCA 3933188 29 100.0 32 ............................. TCCGGTCATGCGCCCGGAGAACGGAGCCCCGA 3933249 29 100.0 32 ............................. CCTTCGTGCTCGGCGTCCTCCCGGGTGCCGGT 3933310 29 96.6 32 ............................G CAGGGCACGACAAGACAGCCGAAGCCGCATTC 3933371 29 100.0 32 ............................. ACCTCTTGTTCCCAGCGCCGATGCAGAACCAG 3933432 29 100.0 32 ............................. TCGTCGGTCTGCCGGCTACGCACGGCCCGTGC 3933493 29 100.0 32 ............................. GGTGAGCCGGTCGTCTGGATGAGGGCGGACGG 3933554 29 100.0 32 ............................. CGGGGGAGCGTCTCGTAAGTGGGCACAGTGTC 3933615 29 96.6 32 ............................T CCTCCGGAGCAGTAGACGATCACGCCGTACTG 3933676 29 100.0 32 ............................. GACCCCTGGACGGTCGTCGCGGTCATCGACGT 3933737 29 93.1 0 ............T...............T | GGGG [3933754] ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.6 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CGGGTCCTCTCGTTTGCGCGAGCTAGAGGTTGCTGGGCTCGGGGGCAGGACGTCTTTCACGGCGCCCGAGGCGGCTCCGGGTGGCTGGAGGGTATCCGGGTGGGGAGGAGGGCGGGGGGTGTTGGCGCCGGTGGTCTCTGCGGGCCCTTGAATGCTCCGTCTTCTCCCGGGATGCGGTGCTCGCTCCAACTCCCGTGGGGGTGGAGGCTGACGTCGGATCCATTTCCGGGGGCGTCTCTGCTGCTGGGGATGTTCAGGCGTTCACTGAAGCGCCGGGCTACCGGGGGGGCGCGTCGAGGGAACTCGGCCTTCGACGATCGTGGGGCGGTGAGCAACGGGGGCGTGGGGCAGGGCGCTGAGGAGTTCGACGGGGGTGGGTGGGTAGGGGTGGCGGGGATAGGGTTAGGTCCGGAGGTTCGGGGAGGGGTGACGAAATGTCCGGTTCTCGGGAAGTAATGAGAAACGGCCGCTCGCCCGGATAAAGACCCAGGTCACGAACT # Right flank : TAGCCGTTGAAGGTGTTCACGGTCGAGACTGTCGTGGTTCCTGCTCGCGGGAGTACGGCATCTCCAACGCCAGCGGGTCGCCGTCCGTAGGCTGGGGCTCGTCTCAGGAAGTGCAAGTGACACTCCGCAGCGAGGACTTTCCTGGTGATGACTCGCACGGCGTGAAGACCCTGCCGTGCTCTGGTGGAGTCGTGAGCTGGACCGGCAACTGGGACAGTGACGACCTCATGAGTCGCCGTGCGACCGGCGCGGCCGGCTGTGCCTGATAGGTGCGGGTCGGTCGGTGCTTTGTGGGCGCCACCAGTTGCGGGTCAGCAGTGCTCCCATCACTGCGCCCGCCGTGTTGAGCAGGACATCGTCCGTGGACGATACGCGGCCCACCGCCAGTGCGTACTGGGTGATCTCCACTGCCGTCGAGAGGAGTACCGCGATGGCGGCCACCCTTCCCAGGGTTCTGGAACGGCGGCTCCGGATCGGTAGGAGGGCACCGAAAACGAGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 5349813-5349051 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047019.1 Streptomyces sp. ST1015 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5349812 29 100.0 32 ............................. TCGGCGGACGTCACCCGAGGCACCAGGGTACC 5349751 29 100.0 32 ............................. CTGTGCTTCCAGAAGCCCCACGGACATCGGCA 5349690 29 96.6 32 ............................A GGATCTTGTCGGGCTGGGGCTGTCTCGGGGCG 5349629 29 100.0 32 ............................. TGTGGTGAAATGTGTGGAGACCCTTGGTGCGG 5349568 29 100.0 32 ............................. CGGTGCGCCGCTCTCGCCAGAGCACCCGCCAG 5349507 29 96.6 32 ............................G GTGACGTCGGCGGAGACCGACCGGTTCTTCAC 5349446 29 100.0 32 ............................. CGGTGGGTCAGCGAACCGACGTACGCCAGCCC 5349385 29 96.6 32 ....................A........ TGGCCGCGCCTGGTCGTCGACTCCGTCGAGGA 5349324 29 100.0 32 ............................. GGCACCGTGGGAGTGACCCAGCAGCCTGGCCA 5349263 29 96.6 32 ......T...................... CAGGACGGCAGAGCGGGCATGACCCGGCGCCA 5349202 29 96.6 32 .........A................... GACTCGCCGGTGAAATCCGGTGAGCAGCTGAT G [5349180] 5349140 29 96.6 31 .................A........... TTCACTCCCCGTAGACGATGACGGGTGGTAC 5349080 29 86.2 0 ......A...........A.......T.A | G [5349063] ========== ====== ====== ====== ============================= ================================ ================== 13 29 97.4 32 GTGGTCCCCGCGCCCGCGGGGGTGTTCCC # Left flank : TCACCACGCAGGACCCCACCTGGGAAGACCCCATCTGGTGACCGTCATCGTCCTCGCCAACTGCCCCGCCGGCCTCCGCGGCTTCCTCACCCGCTGGCTCCTCGAAATCTCCCCCGGCGTCTTCCTCGGCGCCCCCTCGGCCCGCGTCCGCGACATCCTCTGGGAAGAGGTCCGCCAGTACCGCGGCAAAGGCCGCGCTCTCCTCGCCTACCAGACAGACACCGAACAAGGCTTCACCTTCGCCACCCACGAACACGCCTGGCACCCCACCGACCACGAGGGCCTCACCCTCCTCCACCGCCCCACCCAACAACCACCCACCACCACACCACCCAACCCACCACGCCAGGGCTGGAGCAAAGCAGCCAAACGCCGAAACTTCGGAAACAGGTAAAAGCAATCCACCTCATCCCCCCACCAACCCGAGAGGCGATATATCCGCTTCTCAAGAAGCAAGCAAAATCCACCCCTCTCCCGGATAAACCCGCAGGTCGCAGACT # Right flank : CTCACCAGATGCGTAGCCCTCGTTCGACCACGTCCTCCTCACCAACGTGACGCGGTTAAACCCGACCGCCAGGAACTGGCGCTGTCGTACAGCCTGTACGCACCACTGTTACTCGCAGGCTCAGCAGCGCCATAGTTGGCAGTGGCGCTGGGACGATTCATTGGAACTCAGTCGTAGTGGATGTCCTGGCTGACTTGAGATTCCGGGGCCAAGGCGTCGAGAGCCTTCTCTGGCAGGTCCGCCATGTCGTCATCTTGAACGTTCCCCAACCGGGTGCGCACACAGCGGACTGCGGCTCCTTGGCGAGGTCGGTGAGGCGCCCGCCATAGTTGGGATGATAGAGAGAAGCGGCGTTGCAGTCGGAGGCGATCATGGCGAAGTGCGTCGAGAAGGAACGATCAGACACAGCCACAACGAAGACTGCACCCACACCTTGAAATCATGGTTGAGGTTCCTCACGGCACCGCATTCATCCACCAAGTTGTGTATAGCTTGGGCAG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 5361226-5359491 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047019.1 Streptomyces sp. ST1015 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5361225 29 100.0 32 ............................. GGCGGCCCCGGCGACGAACGCGGCGGCCTTGA 5361164 29 100.0 32 ............................. TCCCGTGCCGCAGCCGCCGTGCTGAACGTCAG 5361103 29 100.0 32 ............................. TCCCGCTCCTCGACGATGCGTTCCGCGTCCTT 5361042 29 100.0 32 ............................. CGGCAGCGTGCAGCTGCAACCCGACGGCACCG 5360981 29 100.0 32 ............................. CGGCGCGACGTAGGATCGCTGCTCGTGACTGC 5360920 29 100.0 32 ............................. TCCTCGCCGTCCTTGAGGTCGCACTTCTCGAA 5360859 29 100.0 32 ............................. GTTGTCCGCCATGTGGAGCGGGTGCTCGCGCG 5360798 29 100.0 32 ............................. CCCGTCGAGCGTTCGACGCTTCGTGAGAGATG 5360737 29 100.0 32 ............................. AGGCCGTCCCAGTTCCGGGGCGGTCTGGTCGG 5360676 29 100.0 32 ............................. GTCGCCCTGACCGCGTAACCCCCCCTTGCCGG 5360615 29 100.0 32 ............................. AGCACGGTAAGTGCTGCATTCCGGAGTTCTCG 5360554 29 100.0 32 ............................. CGACCCGATCGAGGTGCCGTGCGACCGCTGCG 5360493 29 100.0 32 ............................. TGGGCGACGACGTCGGCGGGTTGAGGGGTGAT 5360432 29 100.0 32 ............................. CTGCTGCAACTCCTGGCGCAGATCCAGTGGAA 5360371 29 100.0 32 ............................. TGTACGCAGATGCGTACACCTGTGCAAGGGTG 5360310 29 100.0 30 ............................. TGAACAGCGGGTTGCCCTCGGTTGGGGGGC 5360251 29 100.0 32 ............................. TTCATGTGCGAGACGGATTGGTGCCACATGTT 5360190 29 100.0 32 ............................. CCGCCGCCGAACTCCTGCGCAAGCTGTACCTG 5360129 29 100.0 32 ............................. GCGATCGACACCTCCAGCAGCCCCGCCGAGCG 5360068 29 100.0 32 ............................. TCGCCCCACTGCTCGCCCGACATGCGGGCCCG 5360007 29 100.0 32 ............................. CCGATGGCCATCTCCCGAGTGACCAAGCTGTA 5359946 29 100.0 32 ............................. CCGTCGGACTGGGCGTACACCGTGAAGGAATC 5359885 29 100.0 32 ............................. GGCCGCCACAAGAACCAGGTCCTGTCCGACGT 5359824 29 100.0 32 ............................. TCGCGCGGCTGTACCCGCAGTGCCTGTACGAG 5359763 29 89.7 32 ............T.....C..A....... GCCTCGCCGCCGACCGCCGTATCCGCGTGAGC 5359702 29 86.2 32 ...................A.T.....TG TTAACTACTCATTCGAATGAGTGATGGATGCA 5359641 29 96.6 32 ............................T TGTGCAGGGTGGGGGTAGGCCGGTTCTCCAGG 5359580 29 100.0 32 ............................. CGACCCGGCTGGCGTCCGACAACGCCGTACGG 5359519 29 79.3 0 A............CT.........GA..T | ========== ====== ====== ====== ============================= ================================ ================== 29 29 98.3 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : ACTGCATGATCCCGCTCGATCCCGACCCGGTGCGCACGCGTACGCGCGCGCTCGAAAGTATTTGCATTGATAAATACTCGTTTTCACCTTCCCTGCTCGAAGCGCATCGAAGGCCGAACATAAATAGTTTGCTGCACATCATGGCCGTCCTGTCGACAGCCCGAACCGATCAGCCCTTCCGAGACCCCTCGACGTCAACTGCGTTCAACCATCACCGACAGCCGCGACGCCAGCAGATCCGTATCCCGCCGCACCCCCGGAACGACCTCTGGCGATCAACGGCGTTCCGTACGATTGACATCTCGACGCCGGGGAGACCGATGCACCCCACACCCTTGACCTGTCAGCGCGCGAACCACGACGGCGAGTGCCACATCACCAACACAAGCACTTCACGGTCCTCTCTTTCAGCAAGCCACCACACAGTGACCGTAATGTCCGTTTCTCTGCAAGTGACGAAAAACGGCCCAGCACCCAGATAAAACCCCAGCTCACGCACT # Right flank : TCTTTCCGTCCCGGAGGCCCTTTCTGACCTGAGAGGGCCTCCACCTCCGCATGCAGGGAATGGGAGCCATGTCAGAAGCAGCCATGGACGCTCCGGATGTCCGGTTCCCTTGGGGGGACTTGTCCGCCCCCACCAGGTCGGTGTGGGCGAAGTCGGAGATCAAGTCGGGTGGCTGGCTGCCTCTTTGGCGACACATGGCCGACAGCGGTGCGGTGGCAGGCCGGCTCTGGGCGGAGTGGCTGCCTCGTTCGGTGAAGGAGCTGGTGGCGGAGGCGCTGCCCGGTGGTGAGGACGATGCTCACCGGCTTGTCCGATTCCTGGCCGGTGTTCACGACGTGGGTAAATCCACCCCCGCTTTTGCCTGCCAGTTCGAGCCGCTGGCCGATTCGATGCGCCGCGCCGGACTCGACATGCCGCTCTCCCGCGATTACGGGCAGGACCGTCGAATAGCACCGCACGGCCTGGCTGGGCAATCGCTGCTCCAGGAGTGGATGGCCGAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //