Array 1 76055-77022 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADNKH010000006.1 Streptococcus salivarius strain D6t1_180914_C4 NODE_6_length_140308_cov_10.8485, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                             	Insertion/Deletion
==========	======	======	======	====================================	============================================	==================
     76055	    36	 100.0	    36	....................................	TTACAGTAAGCCATTATATTGTTATCTGCAAATAGT        	
     76127	    36	 100.0	    35	....................................	CTTATTGTGTTTACGTCTACCCCATTTCATCCCTT         	
     76198	    36	 100.0	    35	....................................	AGTCTTCTGACTGGTTGTTAATCCATTCTTGTAGT         	
     76269	    36	 100.0	    36	....................................	CTTAAATCGCATTTCCAACATGTAAGAACCCCCACC        	
     76341	    36	 100.0	    35	....................................	ACAGATGCAGCATAAATAGTGATATTGCCAAATGC         	
     76412	    36	  83.3	    34	..........C.C.C.T....C..........T...	TTTTCGTTTAACGTTTCATTAATTAATTCGTTCA          	
     76482	    36	  86.1	    37	............TCC...C.A...............	TCCCCGACATTAACGCTATCGTACTGTTCCTTGCTGG       	
     76555	    36	  91.7	    38	........T...TA......................	AAAATCTTTGTCAAACATCGTTGACCTCCAATTGTTTA      	
     76629	    36	  94.4	    36	............T.C.....................	ACGTGGATTGTCTGGCGTAGTGGTTAAAGCTACTGT        	
     76701	    36	  88.9	    27	............TG..................TT..	TCAATGTAATCAATCCTATTATTTAGT                 	Deletion [76764]
     76764	    36	  83.3	    44	TC.T........TA....C.................	GCAGGAGTTTCACTCGTTCTTGGTGCAGTACTTGGTAAAGTACG	
     76844	    36	  91.7	    36	.......C....TC......................	CTGCTAAATATGCTTCAAAAAGATCATTAATGTTTT        	
     76916	    36	  88.9	    35	.......C....TC..................T...	GTAAGGTTGTAGAGTTTAGGAGTTGCCTTAGATTT         	
     76987	    36	  69.4	     0	.......C....CA.......C...A....TTTTTT	|                                           	
==========	======	======	======	====================================	============================================	==================
        14	    36	  91.3	    36	GATATAAACCTAATTACCTCGAGAGGGGACGGAAAC	                                            	       

# Left flank :   AGAGTTTGATTAGGGCTTTTGGAGAACTGGACCCTAGTCTTTATGAGACAAGTTACACAGGAGGGCATTAATGGGACTTTATTTTAATCTCAGTGAAGAAGAACGTGAGTTTGCCAAACAAAAAACCATGTTTTGTCTGATTATTTATGATATCCGAAGTAACAAACGTAGACTTAAACTCTCCAAGTTACTTGAAGGTTATGGCGTGAGGGTGCAAAAATCCTGTTTCGAGGTCGACCTGTCAAGAAATGATTATCAGTCTCTCCTTAAGGATATCGAGAGCTTCTATAAGGCTGATGAAGAAGACAGCATAATCGTATATGTGACAACCAAAGAAGAGGTGACTAGTTTTAGCCCCTACAATAGTGCTGAAAAATTAGATGACATTCTCTTCTTCTAAGCCTTTATAGGCCTGTAATCATATGGTACAATATAGATAGTGTTTCCAGTAGGTCCTACATCTTGTGTCTCTAGCAACTGTCTAGAGCACAAGATATGGG
# Right flank :  TGAAAATTTTGAAAACAGTCTTGACACCGCTTCCAGAAAGTGTTAGACTAAAAGCACATTAAGGGCGCCCCAATGAGGTGAAAAGTACTTTCAGCTTTTGGGGTTTTTTCATACAAAGATGAAGGAGTCGAATGAAAAAATTAGTATTTACTTTTAAAAGGATCGACCATCCTGCACAAGATTTAGCTGTTAAATTTCATGGCTTCTTGATGGAGCAGTTGGATAGTGACTATGTTGATTATCTGCATCAGCAGCAAACAAATCCCTATGCGACCAAGGTAATCCAAGGGAAAGAAGACACGCAGTGGGTTGTGCATATGCTCACAGATGACCTCGAGGATAAGGTTTTTATGACCTTATTAAAGATAAAAGAGGTGTCCTTAAATGACTTGCCTAAACTCAGTGTCGAAAAAGTTGAGATTCAGGAGTTAGGAGCAGATAAACTGTTAGAGATTTTCAATAGCGAGGACAATCAAACCTATTTTTCAATCATTTTTGAG

# Questionable array : NO	 Score: 5.37
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATATAAACCTAATTACCTCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-4.70,-1.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-30] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.27   Confidence: MEDIUM] 

# Array family : NA
//