Array 1 23256-23645 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAHH01000002.1 Rahnella woolbedingensis strain DSM 27399 contig_00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 23256 28 100.0 33 ............................ TGTGAGTTTGGCGTTTTGCCGGTGCAATCAGGT 23317 28 100.0 32 ............................ GGAAGCATGCGGCAAGAGACATTCTCTACGTA 23377 28 100.0 32 ............................ CGGATGGGATGCCTTTTGAAATAGAGCGTGAA 23437 28 100.0 33 ............................ AGTCAATACCGTCATAGCTCAAACTGATGCCGC 23498 28 100.0 32 ............................ GAGCGCGGCGGCTGTTGCTAGCATGGTTACCC 23558 28 100.0 32 ............................ CCGTTGCGCCGGCAGTGGCCTGCGGCGTCAAT 23618 28 92.9 0 ..................C.....C... | ========== ====== ====== ====== ============================ ================================= ================== 7 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGATAAAAGAAATCATCACGTATATTTTGTGGGAACGGTTCGAGATGCTGCGTTGCTCGCTGTATACCTCCTCTGAGGAGCTTGCCGCATGAACAAAGACTGGCATCAGGCCGATATCATTGCGGCCATTAAAAAGAAGGGCACTACGATGGCGGCCGTTTCACGCCGCGCGGGGCTAAGTTCTTCGACGCTTTCGAATGCACTAACCCGCAAATGGCCGAAAGGTGAAAGACTGATCGCAGAAGCCATCGGCGTGCAAGCCGAAACCATCTGGCCAGGCCGGTACACCGAAATCAAATTCAACTGAGAACGACGCCTTCCCCTGCGAAGGGGAAGGCTGGGATGGGGTATTAATGGCAACTCTGCGTTTACCCTCTTTTTGGCGTGTTCGCTAACCCTTTGTTTTTTATAAAACACAAACTCCATCAAAAAAAGAGGGTATTTCCTCCCAAACAGGAATAACCTCTTGTAGTTCAACGCCTGAAACAGAAAATCTAACA # Right flank : ACACATCATAATTAACTGAGGCTATCAATATAAGTCTACTGCCGCACAGATAGGGAAACCCTTCTTTAAAATTCACCCTTCAAAAAACTAATTAACCAAATAGCTTATTTGATTATCTAAAATGTATAGTTAAATGGCGGAGTGAAAAAATCAATTCGAGATTTAGTCCAAAAAAAATAAATTTAATCGTTGATGTTCCGGCTAAAGGGTCTAGTTTAGTTTTGGTCATTTCCAAAGGAAAGAAGCGAACATGACCGACACATTGAAACCTGCTGAGCTGAAAACTATTCTCCATTCGAAACGTTCAAATATATATTACCTGCAATATTGCCGCGTGTTGGTCAATGGCGGACGTGTCGAATATGTCACAGAAGAAGGGAAGTCGTCGCTTTACTGGAATATCCCGATAGCCAATACCACTGTTGTCATGCTCGGCACAGGGACGTCTGTGACGCAGGCGGCGATGCGTGAATTTGCGCGCGCGGGTGTGCTGGTCGGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //