Array 1 48542-48971 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRLB01000004.1 Bacteroides uniformis strain AM14-1 AM14-1.Scaf4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 48542 47 100.0 30 ............................................... GGAAAGAATTCAGACCGTCCTGCAGAAACT 48619 47 100.0 29 ............................................... GTGTTGCTTGATGGTAATTACCTCACAGA 48695 47 100.0 30 ............................................... TAATACCGGTACCTACGTCAGCGCTCCCTC 48772 47 100.0 29 ............................................... ATATTTTGCGGAAGAACGGGGAAAAGGAC 48848 47 100.0 30 ............................................... TTATACTTGTCAATAAGTTCTTGCTGGTTG 48925 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGT # Left flank : AGTGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCATACTTGTCGGATTCTTTCAGTCGGCTAATGCTGACAGGACCGAAAATCTCGTCGGGCGTAGAGAAGCGGGACATCAGATATTCAAAGGCACGGGCATCTGTAAAAGCCGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGTCCCAGGAGCAGGATGCTCTCGCCTGCCAGAGCTGCCAGCAGGGAGAGGTTTATTTCAGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGACGAATGCGTTGGGTTATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACAAAATAGTAGGGAAATCAGAGAGAGTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACAC # Right flank : TAGACTATTCATTATAATCTAATAATCAAATGGTTAAACAATCAATTTGAATCACAAAAAGCAAACAGTTTTCCACTAAAAATCCCACCAACAAGTGGGATTTTTACTTTTAGAATAACTCCAACTGTTGCCCCGGTGTATTCACATCTTGAACTTTTTTCCCATAAAAGAGCTCAATATTACCAAATTGTTTGTCCGTAATACATATAATTCCCACCTGTCCAAACTCCGGTAAGAAAGATTTAACTCTTTTTATGTGCACATCTGCATTTTCACTGCTGGCACAATGTCGTACGTAGATGGAAAACTGAAACATAGTAAATCCATCCTTCTGCAGGTTCTTCCGGAAGTCTGCATACGCCTTCTTATCCTTCTTGGTATCAGTAGGCAAATCAAATAACACCAGTACCCACATAATGCGATATTCACTAAAACGGTCCATTACATTTCCGGATATGTTATTTTACGCAACTCTCCATTAAAACATTTATAAAGAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //