Array 1 6510-8482 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCVS01000010.1 Deinococcus sp. DB0503 10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 6510 37 100.0 36 ..................................... AATGAGCCAGAAATGCAGCACATCGGCGGCCTCCGC 6583 37 100.0 36 ..................................... CAGGACTCAATCCCCTTGTAGCCCGTCTTGGCCTTT 6656 37 100.0 35 ..................................... GAGGTTGCAGTCTCCTTATCGTATGAATGTGTAAT 6728 37 100.0 33 ..................................... GAGCGAGGCGATGTTCACCCAGCAGTTGACCAG 6798 37 100.0 35 ..................................... GTTGAGGGTCTCAGTGGAGGGCTTGGTGTTCGTAT 6870 37 100.0 37 ..................................... ATCTTTGACGAGGCGCAACTATGGTTTAACGCACGGG 6944 37 100.0 35 ..................................... CTGATGCGCTTTGACACGATCAGACACGGCGGTGT 7016 37 100.0 38 ..................................... GCGCAGGGTGACGGCCGCCTCCCGGAGCGGCAGGCCGC 7091 37 100.0 35 ..................................... GTAAAAGCGCCAGGTGTTGACACCCCCCGCGCGCT 7163 37 100.0 35 ..................................... GATGGCGGCGGGCGCGCTGTTCGGCCTGCCCTGAA 7235 37 100.0 35 ..................................... TGGCGACTTCACAACCAGGGCCAGCTTTCCGTCTG 7307 37 100.0 36 ..................................... TTTCTGCCGCTCCCGTCGCCATCGTCGGCTCCCGGC 7380 37 100.0 34 ..................................... GCCCTGGCTGACCCGCTCTAGCGCGGGCGCGGGC 7451 37 100.0 33 ..................................... TCCCCAGAGTCATCCCAAGGCAGGTCATCCGTC 7521 37 100.0 36 ..................................... AGGTATGGAAGGCGCTGTACCCTCCATCCCACCTCT 7594 37 100.0 33 ..................................... CCTGTTAGTGAAGCTCTGGAACCCATCCGTTGG 7664 37 100.0 34 ..................................... CACGGTGTTAATGTCTAACACCATGAACATAAAC 7735 37 100.0 36 ..................................... TACGACATCCCAGCCGTACCCGTCGGCATAGGCCAG 7808 37 100.0 32 ..................................... TCTACGTCGGGTATGGCGTGAGACTCAGTGCG 7877 37 100.0 33 ..................................... CAACGTTAAACGGAGTTCGTGGGAGTGAAGGAC 7947 37 100.0 35 ..................................... CAGGGGTTCAAACCCTTCGAGCCCAGACACCTGCT 8019 37 100.0 34 ..................................... AGGTGCACCGTGAGGTTGGTCTTGCCCGAACCGC 8090 37 100.0 31 ..................................... CGAGCGATTGAATAAGTCCGGCCTAACTGAA 8158 37 100.0 35 ..................................... CTTGCCACCCTCACCACGCTTCAGGACGCCGCCCC 8230 37 100.0 36 ..................................... CCCCCCAAGGGCAATTTGGGCTACGAGATAGCCACA 8303 37 100.0 35 ..................................... GGGGTCAATCAGAGTAGCGCAGGCGCAGCTCCTGC 8375 37 100.0 34 ..................................... CCATTCGCGCCACCCATCCCCCCGGGCTATCCGG 8446 36 94.6 0 ..............................-.C.... | A [8472] ========== ====== ====== ====== ===================================== ====================================== ================== 28 37 99.8 35 GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Left flank : TGAAGAGATCAAATTCAACCTGGGCAGCGACCCCGACGTTCGGTACACGCGCACCGTCCAGATCCTGAGCACGGACCGCAACGCACAGGGCAATGTCCTGAGAACCACCTACCGGGTGACCTACACCTTCGAGAACAGCAAGGACCGCCCTGTCCGTGCTGAGGTGACCGAGCAGATCAATGGCCGCCGGATTCTGATTGATGGCGTGGCGAAGGGCCAGAATGCCGCCGCCGAGCTGCGCGTGGACGTGCCCGCCAACGGCAAGGCCACAAAGAGCCTGACGGTCTTCATTGACAACAGCGAGCAGTAACGAGCAGTCCATTGCGCGAACCTCCCGTGACGGAAAAAACCCGGGGGGTTCGCGCAAAGCAAAAAGTCCCTCTGGGACGGGAAATTTGACAATCCGCATTTTGGGCCACCGTCAAAAACTGGACAGCGCCGGGGGGGTTCGCGCAAAATGGGTCCGGGGAACCGTCTAGGACACGTCCAAGCGGTGAACC # Right flank : CAATCCCTTCGAGATACGCCCGCACGTCCGCCTTCACCGGCATGAAGTACATGTGCTGGCCGCGTTCGCGGGCAAAGGCGAGGGCCTGCGCTGCAAAAGTGCGGTTCCACTCGAGCGTCGGGGTGAAGTTGCGGGGAAAGACGGCGTGATTGCGAGCGCGCCAGTAGTTCAGGGTGGCATCGCTGGTCACGGAGGTGGCGCCCCACCAAACCTCTGCGCCTTCCGGGATCAGGTCGGCGTAGGCTTCCATCAGGCGCAGGTCGAAGAAAGGTTGGGTGAAAAATCCGCAAGCGCCCGCATCGAGCTTGCGCTCCAGGTAGTCGCGTTCGCGGGCAAAGCTCTGCCGGTAGGGGTCGAGGCCCGCGTAGATCCGCATGTGAGGAAGTTCGCGGCGGAAGCGCCGGATGGCCCGTACAGCGTCTACGTCATGGACTTGGGCGCTCATGTCGGCGGGTGCGTCGCCGGTGATGATCAGGACTTCGTCGATGCCGGCGGCATCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 97476-96073 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCVS01000003.1 Deinococcus sp. DB0503 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 97475 37 100.0 33 ..................................... GAGGGTGCCCACCGCGCTGAAATTCGTGAAGCT 97405 37 100.0 35 ..................................... GTAGTAGGGCGTGCGGTCGATCCAGCCCACCCCGA 97333 37 100.0 34 ..................................... ATCACGTCCGGGGGTTTGCCCGTCACGCTCTCGC 97262 37 100.0 35 ..................................... GACGACCTGCGCCGGAAGCTGAACGCCCACGCCCG 97190 37 100.0 36 ..................................... TCGCGGGTTTTGCGCGAGCTCGACCAGGTGCAGCGT 97117 37 100.0 36 ..................................... ATTACCATTGGGGGTCTCGATTACATCCGGCGTGAG 97044 37 100.0 33 ..................................... CCCGATGACGCCGCCGCCGTCCGCGAACAGCTC 96974 37 100.0 35 ..................................... ATGCACCACATCCCAACAGGGACTCGCGGAAACCG 96902 37 100.0 37 ..................................... AGGAGTGACCAAACGAGCTTCTGCTGGTGCGAGACGT 96828 37 100.0 34 ..................................... TTAACTTCTCGCTGAGCCAGAAACATCTCAAAAG 96757 37 100.0 35 ..................................... CTCCCTCCCGCTCAGGAAAAAAGGGATAGGGCAGC 96685 37 100.0 34 ..................................... CGAGTATTCCTCGAACGTCTTGCAGACCCGGATT 96614 37 100.0 34 ..................................... TTTTGCAGATATTGGATGACGGGGGTGTAAAAGT 96543 37 100.0 36 ..................................... GCCCTCAAGGCCGGTCGTCTCAGTGTCCACGACCAG 96470 37 100.0 35 ..................................... AACTCAATGTTATCAGTGCGAGCAATGGGCTTCAG 96398 37 100.0 35 ..................................... AACTCAATGTTATCAGTGCGAGCAATGGGCTTCAG 96326 37 100.0 36 ..................................... TCCGTGTACCTCCCCTCTAACAGGGAGTCTGCCTGC 96253 37 100.0 33 ..................................... ATTGTAAGGCAATGACCTTTCATCGTCCCATTC 96183 37 100.0 37 ..................................... GGGGCATTCCTCGCCGTGCGCCATGTAATCGGCCTCG 96109 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 20 37 100.0 35 GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Left flank : CCCCCCTCGCCCATTGGCCCGCGCACCTTGGTCGCGATGACCATCTCATCTCGGCTCCCGCGCGATTTCAGCCAACGCCCCACGATTTCCTCGGACACCCCGCCGGGATTGCCGGGCACCCAGTTGCTGTAGATATCCGCCGTGTCGATAAAATTTCCGCCCGCCGCACGGTAGGCGTCCATCAGCTCGAAGGCCGTCGCCTCATCCGCTGTCCAGCCAAACTGCATGGAGCCAAGCCCCAGGGGAAAGAGGCGCAGGCCGCTGCGACCGAGTCTGCGGTAGGAGGTCATGGGCGACAGGGTAGCGTCCTCGCCACCCTCGCTGCGCGAACCCCCCGTGACGGAAAAACCCCGGGGGGTTCGCGCAAAGCAAAAAGTCCCTCTGGGACGTGAAATTTGACAACCTGCTTTTTGGGCCATCGTCAAAAACTGGACAGCGCCGGGGGGGTTCGCGCAAAATGGATCCGGGGAACCGTCCAGGACACGTCCGAACGGTGAACC # Right flank : GCGCAGGAGGACGGCTAGCCCTGTGCGAGGGCGGCGTTCAATTCATCGCGCAGCCGCCGGGCAGCTTCCCGGCTGGCCGTGACGCTCAGGCCGTCCGCGTACTGCACCGCTCGGCTCGCACTTGCCAGCGCCCCGGTACCGCCGGGGTGAAAGGCCGGGGCGAGCGCCGCAGCCGTTCCTCCCTGTGCGCCCAGGCCCGGCAGCAGCAGCAGCGCCCGCGGCATCAGGGCGCGGAAGAGCGCGAGATCCTGCGGATGGGTTGCGCCCACCACTGCGCCGACGCTCGCGTATTCCCCTTCCTCCTCCGCGTCCAGCCGGGCCACCTCCACCGCCACACGCTCGCTGACGCCCTGACCTTGGACATCGGCCTGATCGGGATTGCTGGTCTTGACCAGCACAAAGATGCCCCCACCGTTCGCGCGCGCTGCCTCCACGAAGGGCGTGAGGGTCTGAAAGCCCAGGAAGGGATTCACCGTCAGGGCGTCCCCCGCGTGCGCGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 1 48114-46863 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCVS01000001.1 Deinococcus sp. DB0503 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 48113 37 100.0 34 ..................................... AACGTCCGCACGGAGCATGACGAGCTGCTCGGGC 48042 37 100.0 33 ..................................... CGCATCTCCAAGGCAGAGAAAGCCCTTCAGAGC 47972 37 100.0 33 ..................................... CCCGAACGGCACGCGGGCCGACCGAGCGCATCT 47902 37 100.0 35 ..................................... CCCGAAAGGAAAATAACCATGACAAACCTCACCGA 47830 37 100.0 35 ..................................... ATGCCTGAACGACGCGGACGCGGCGTTTGGCCGGG 47758 37 100.0 33 ..................................... AGGTGGGGCCTAATCCGGGCTGGTGTGTTGTCC 47688 37 100.0 36 ..................................... CCCCGTGGGGCTCGCCACCCGTACCCGGCTGGTGGT 47615 37 100.0 35 ..................................... CTGGCCTTTCTCTACGGGACGGGGTGCCGGATCAG 47543 37 100.0 35 ..................................... CTCCACGCGTTGCACGCGCGGCGGAAGGAAATCAC 47471 37 100.0 35 ..................................... CTTCGGGGCACTAACCCCTACTTGAACCTGACCGG 47399 37 100.0 36 ..................................... GAGTCCGGCACGCTCGGCGGCGGTGTCCAGCATCTT 47326 37 100.0 35 ..................................... ATCGGCAAGGGCGACAAAGAGCGGGTGATTCCGCT 47254 37 97.3 35 ...A................................. ATGGAGTCGAGCGATACTCCCTTCTTCGTTAATGC 47182 37 100.0 33 ..................................... CCTGAAGCTCAGGGAGCCCTTACCAGCCCTGCT 47112 37 100.0 34 ..................................... TAACGGGTGTTACTCCTCCGCGCCTTCTTCCTTC 47041 37 100.0 35 ..................................... GCGTAGGGAACAGGCGGGACGCGAATCCTAACCGC 46969 37 100.0 33 ..................................... CTTCCTGGGGCGCATCTTCCAGGCTTCCGAAGA 46899 37 78.4 0 ..........................T.CT..TGCTT | ========== ====== ====== ====== ===================================== ==================================== ================== 18 37 98.7 34 GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Left flank : CTTCGAGATAGGCCGCTACCCCTGCCTCTGTCAGGTCGGCGGGCTGCGCCTCCAGCACCATATTCAGCACGCGGTACTGATGGCCGTACTCGCGGTGTTCCTCCATCAGCACCTCCGCGCTGAAGCTGTCTCCGACTTCAAGCGGCGGCATCACGCCTATAACGGTCGCGTCAGGGTCCTCGCCTTCAGCATTCCGCAGCCGGGCACTCATGACCGTAAAGCCGCTCTCCGCACGGAAGCGGACCTTATTCACACCTCCGGTCACGCGGAAAGGTTCGGTCGGGAGGCCAGCGCTCATGCCCGCCAGGATAGCGCCCTTTCTCGCGCGAACCCCCCGTGACGGAAAAACCCCGGGGGGTTCGCGCAAAGCAAAAAGTCCCTCTGGGACGTGAAATTTGACAACCTACATTTTGGGTCACCGTCAAAAACTGGACAACGTCGGGGGGGTTCGCGCAAAATGGGTCCGGGGAACCGTCCAGGACGTGTCCGAACGGTGAACC # Right flank : CTTCTCGGGATGGTTTTCGGCTTGCCCGCTCCTGGTCACATGCTATTTTTTCCGTCATGCGCGTACTGCACACCGCCGATTTCCATGCTGGGCGGAATCTGCGAGGCTTTGACCGCACGCCAGAGATCCATGAGGCCCTGGTGGAGATCGCCGGGCTGGCCCGCAGCGAGAAGGCCGATGTGGTGCTGGTTTCTGGTGACCTCTTCGACACGGTAAACCCATCGGCAGAGGCCGAGGCCGCTGTGTTCGACTTCTTCCTGAGATTGCGGGACGCGAATATCCCGGCGGTGGCGATCGCCGGGAACCACGACTCGGCGGCGAGGTTACACAGCCTGGCCGGACTGCTGGGGTGGGTAGGCGTGCAACTCGTGGCGCAACCCACGGCGAATCCGCTCGACATGATCCGCACGGTGGAGACACGGCAGGGCGAACGGCTGACCGTGGGGGCCCTACCCTTTCTCTCCGAGCGGCGACTCGTAAAGGCGGCTGACCTGATGGGC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 2 189294-187373 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCVS01000001.1 Deinococcus sp. DB0503 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 189293 37 100.0 36 ..................................... CCGTTCACGGCGGGCGCGAATCGCCGCCTCGCTGTA 189220 37 100.0 34 ..................................... CTCGGACGTCAAACGGGCAGAACATGAGGCCCAG 189149 37 100.0 36 ..................................... AGATAGACCCTACCTTACGGCTTTCGTCGTGTTCCC 189076 37 100.0 40 ..................................... CTCGATGACCGTCGTGACCGAAACGAGGTGAGCAGTTGGC 188999 37 100.0 34 ..................................... CTACTGGGGCGTTCAAGAAGGCTTGCGCCGCTGG 188928 37 100.0 35 ..................................... TACCTCTTTTTTTGCCACAGGGCCCTCCTGCCGGG 188856 37 100.0 36 ..................................... TGGGCAGGACGCGCACGCAGAGCAGGGCGCGGCTGC 188783 37 100.0 36 ..................................... ACGCGCCGGGGGCGCGGGCTGAGAAACGGGGATGGA 188710 37 100.0 33 ..................................... GTGGGTTCGCGAAGACGGTAGAAGCGCTCCGGG 188640 37 100.0 35 ..................................... CAAGCCGTCCTGAAGGGTCGGGGACGGGTGGAAGG 188568 37 100.0 36 ..................................... CATGTTAGGCCCTATCGCCTTAGGCGCTGACGGCTT 188495 37 100.0 36 ..................................... ATCCCGGTAAGTCCGGGCGTCTGCCTGAGCGCCCAC 188422 37 100.0 35 ..................................... TATCAGAGGCAGCGAAACGGTGCGTCACCTTCGAA 188350 37 100.0 38 ..................................... TGGCGAATGGAACAGCTTTGTTCGCACGATGATGACGA 188275 37 100.0 34 ..................................... ACACTCTCATCCGGCAAGCCGCGCACTGGCCGAT 188204 37 100.0 33 ..................................... AAGCGTCTGCCGTCTGCATCGGCGTTTTTCCCG 188134 37 100.0 39 ..................................... CCTTCACCGCTCCCACGTCGGGCACGAGGGTGCATCTGC 188058 37 100.0 36 ..................................... TCCTTCAGAGCGCGCTCAATCCAGGCGAGCGCCTGT 187985 37 100.0 33 ..................................... GGGTTGGGCGTCGCGCCCCGTCGCATCGCGCGT 187915 37 100.0 34 ..................................... CCGCCTGCCTCACGCGGGGGCCGCGCCCTTTCAG 187844 37 100.0 34 ..................................... GCTCCCTTAGACTCTGGCTGGATGAACTCATCAC 187773 37 100.0 35 ..................................... ATCGGGTTGTCCTCTTCTACCTCCCTAGGCTTGTA 187701 37 100.0 37 ..................................... ACCTGGCCAGCAGTGCGGGCTTCACCACTGCGCCGAG 187627 37 100.0 38 ..................................... ACACCGGAACTCCAGGCTCATCACGCCGGGGATGCTCG 187552 37 100.0 35 ..................................... CACGATCCGCAGCGCACCGTCGGCGCTGCTTTCGC 187480 37 100.0 34 ..................................... ATCGAAGGTAAGGCGGCGCAGGCACACGGCCTCT 187409 37 94.6 0 ..................................C.T | ========== ====== ====== ====== ===================================== ======================================== ================== 27 37 99.8 36 GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Left flank : GCTCTCGCCCTCGGCCCTGCGGACCCTCGACACCCTGGACTTCAGCACCCGCAGCGCCTACCTGGGGCTGCTGGAGCGGTTGCGCCAGGGCCAAGACCGCGAGTGGCAGCGCAGCACCGAGACACTCTCTGGGGGCGTTCTGAAATTTCCTAAGGGCCACAGCGTCCACCGCGCCTTTTTTGTGGAACGCGAGGGCATGCTGCACGTCCTTGAGCTGTGTGGTCATGACAACGAACGGCGCTACCAGCACTTGATGCAAACCATCCGCTGGAGCCAATACGAATCCCACACCTTCCAAGATTTGCCCTAAAGCCGCCTTTCCTGCGCGAACCCCCCGTGACGGAAAAATCCCGGGGGGTTCGCGCAAAGCAAAAAGTCCCTCTGGGACGGGAAATTTGACAACCTGCCTTTTGGGCCACCGTCAAAAACTGGACAACGTCGGGGGGGTTCGCGCAAAATGGGTCCGGGGAACCGTCCAGGACGTGTCCGAACGGTGAACC # Right flank : TTCGTGCATTGCGTGCCCAGCTGTTCCCCAGCAAGTCACGGCAAGGGCGGCTGGCAGCGGGTTTAGGCTCCAACCATGACCTCCACCGCGCCGGCCACGCCCCCAGAAACGGATCGGGCCGCCCTTCCTCCTCGCCCGCTGGCGCTCGCCCGTATGTTTATGGGCGTCGCGCTCTCGGGAATTGGCGGCGGTCTGCCTGCCCACACCCGGCGGGCACTGGTCACGCGCGGCTGGATGACCGATGAAGCCTTCGCTGAGACCTTTACACTCGCGCAACTCACGCCCGGGCCAAACGCCGTCAATCTGGCGGCGATGGTCGGTGCCCGCCTCGCCGGGCCCGGAGGAGCGCTCGCCAGCGTGGGGGGGGTCTTGGCCCCGGGGCTGCTGGCCATGCTCGCCGTAAGTGTGGTGACGCTCGAACAGACGGGAGGCTTACCGCCAGCGCTGCAGAGCGCCCTGCGCGGCGCCGCCTGTGCAGCGCTGGCCGTGCTGTTGACGGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 8282-8798 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCVS01000051.1 Deinococcus sp. DB0503 51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8282 29 100.0 32 ............................. TACTTTGCGCGGCGGATCATCAGTTCCGAATC 8343 29 100.0 32 ............................. GCTTCGGGTGCTGCTTGGGGCAGCGTAGAGGC 8404 29 100.0 32 ............................. GCTTCGGGTGCTGCTTGGGGCAGCGTAGAGGC 8465 29 100.0 32 ............................. CCCGCGAGGGCGAGCTGGGTGAGCAACAGGGT 8526 29 100.0 32 ............................. TTCCGCATCCCCTTCGCGCATCACCCTCTCGC 8587 29 100.0 32 ............................. CAGCGTGCTGATCGCCGGGCCGGGTCTCTACA 8648 29 100.0 32 ............................. CCCCCCCGCGCGTACTCCCACAGCGCCGCGAG 8709 29 96.6 32 ............................T TCCAGGCGGCCTGATGATTCCCCGTCGCGATC 8770 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.6 32 GTGTTCCCCACGGGCGTGGGGATGGTCCG # Left flank : ACCTCCTGCACCTGCTGGGCGGGGACGACACCGACCCGAACTCCACCGCCCCCGGCGACTTGTGGGACCCGGAGGGCCACGCGGCGGGAGGGGTGAACCATGCTGGTCATGACTCTTGAGGCCGTCCCCGAAAGCCTGCGTGGGGAGCTTTCGCGCTGGCTGATTGAGGTGCAGCCGGGCGTGTACGTGGGCAACGCCTCGGCCCTGGTGCGCGATCTGCTGTGGGACAAGGCCGTAGGCCACACCCGCCGTGGCCGCTGCACCCAGGTCTACCGGGCGAACAACGAACAGGGCTTCATTATCCGCACCCACGGTGACCCCACGCGGCGGGTGATCAGTCTCGACGGATATCAACTTGTTGCCGTTCGCAACGCCCGCCATGCAGAATTGGCCCAGGAGTACGACCCTCCGGAGGACAATGACAAATTGTGATCTGAATCCGAGCGGGCAGAGGGGACTTCTCCGGGGGTGACGGCCAAAGAAGGCTATGTTTATGAAGT # Right flank : GGCCAGCTCGTTTCAGGGGTTACGGAAAGACCTGCTTGCCGTCTGGACTCTGACCTGGAGGAGCGAAGCGAGCACACCGGCGCGGCCTGGGGGAATATCAACCCCCACGGCTCCTTCAGCCTGACCGGTCCTTGGCGATGTCGGTGAGGTCCATCGCCCGCAGTTCTGGCGCGAGGTAGGCCGTCACACCCACCACCAGCAGGGTGACCAGCCCGCCCAGCCACACGCTGCGCGCGGTGCCCAGCCAGCTCGCGGCCAGGCCACTCTCAAAGGCGCCCAGCTCGTTGCTCGCTCCGATAAACATGCTGCTGACCGCGCTGACCCGCCCGCGCATGTGGTCGGGGGCCTTGAGCCGCAGTGTTGCTCGGCGCACCACCATGCTGATGCCGTCGAACACACCTGCTGCAACCAGCACCGCCACACTGAGGAAGAAGTTGCGTGACAGCCCGAACACCACCATACATATCCCAAAGCCCGCCACGGCAAGCAGCAGCGTGCGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGCGTGGGGATGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 59510-58464 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCVS01000011.1 Deinococcus sp. DB0503 11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 59509 37 100.0 37 ..................................... GCGGTGCTCGCTCAGCCACTTCTGGTCAGACTTGCGT 59435 37 100.0 35 ..................................... CGCAAATAGGCCGTGCTTGCGCCAGAATAGCCCTA 59363 37 100.0 35 ..................................... TGAGCCGTGGCAGCCCCGCAAGGCGGGCAAGTGAG 59291 37 100.0 35 ..................................... CACCCCAGGTACCAGGCCGAGAGCAGCACCCTCAC 59219 37 100.0 33 ..................................... GCCAGTTCTCTGGGCGGGAACCGATATAAGCAA 59149 37 100.0 37 ..................................... CTTCAGGACGGGAGCTTGAGCCTGAGGGCCGAACTGA 59075 37 100.0 35 ..................................... GCGGGGACACCCACCGATTCTGCTGCTTCATCCAT 59003 37 100.0 35 ..................................... CTCGACGGTGTACACGCGCGTTTCGCGGTAGTAGT 58931 37 100.0 34 ..................................... GACACACACCACAAGTTCATGAGGTCGCGCTTAC 58860 37 100.0 35 ..................................... GGCAGGGCACTGCGCCAAAAAGAGGGGAGGGACTC 58788 37 100.0 35 ..................................... TACACCTTCCCGGTCAAGACCCACGCGCGGCAAGC 58716 37 100.0 35 ..................................... GTACAGGTTGCGACACAGGCGCAACTGTTCGTTGT 58644 37 100.0 35 ..................................... GGCCTGAACGGCCTCCCGGACGAATCTAGGATCGG 58572 37 100.0 35 ..................................... GGCCTGAACGGCCTCCCGGACGAATCTAGGATCGG 58500 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 15 37 100.0 35 GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Left flank : CATTACCCCCCCTACCTGCACCGATGATCGACCTGCTGATCTGCTACGACATCGCCACCCAGACCGAAGCAGGCCGCAAGCGCCTGCGCCGAGTCGCCAAAGTCTGCGTGGCCCACGGCCAACGGGTCCAACACAGCGTCTTCGAAGTCAGCGTCAGCGAGATTCAGCTCCTCACCCTGCGCCAGAAGCTGCTGAATATCCTCGACCCCACCGAAGACAGCATCCGCCTCTACCGCCTGCGTCAGCCGCGCGACAAGTTCGTCGAGGCTTACGGCCTCGACCACTACCGCGACCTCAGCGACCCCTTGATCCTGTAATCTCAGCGCGAACCCCCCGTGACCATGAAAACCCGGGGGGGTTCGCGCAAAGCAAAAAGTCCCTCTGGGACGTGAAATTTGACAACCTACATTTTGGGCCACCGTCAAAAACTGGACAGCGCCAAGGGGGTTCGCGCAAAATGGGTCCGGGGAACCGTCTAGGACGTGTCCGAACGGTGAACC # Right flank : GAGGATTGAAACCTGGTCTGGTTTGGGCCGCATCCAAAAGAGAAAAAAGGAAACCCGCCCTGCTCCAGAGCAGGCCGCTCGCCAACCAAGCCCAACCTTCAGTCTTCCGCTTCGGCGCCCGGCCCCCGTCCCCTGCCCCCTGCTCCGTCAGGGGCACGGGTAAGTTCAGCAGCGGGCACGTTCGTCAGAATCCCCTGCTCGGTCTGCACGTCCACCGTCCCGGCGAGCGGATGGAGCTTGGTGACCTTGCCGCAGGCACCGCTGCCGGTGTGGCAGACGCGGGCGTTTTTGCGCGGCAGGTCGCGCAGCAATTCGAGATACTGGGTGTGCTCAAATTGCAGGCAGCACAGGAGCCGCCCGCAGGGTCCCGAAAGCTTCTCCGGGTTGAGAGGGAGCTGCTGGTCGCGGGCCATGCGGATGCTGACGGGCGCGAACTCCTGAAGATGGCTGCTGGAGCAGTTCTCGCGGCCACAGGCCCCCAAAGCGCCGATCATCTGCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCTTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : NA //