Array 1 25973-30444 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAB01000028.1 Enterocloster clostridioformis strain 2789STDY5834865, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 25973 32 100.0 34 ................................ CATAATCGACCGGAACTCATCCCCCTGCAGTTTC 26039 32 100.0 33 ................................ GCCCAGATGCCCATGACGTTTGCGGATGTCTGG 26104 32 100.0 35 ................................ CGCTGTCATTTCCAGGGCGGTCACTGCTGCCTGTG 26171 32 100.0 35 ................................ CCATCCTATCAAAATGGATTGGTGTGTAATTGATG 26238 32 100.0 34 ................................ TGGATATCCCAGGAGTTGAGGATTTTGACAATTT 26304 32 100.0 37 ................................ CGCCGGAATAACCGCCGTCGGTATATATCTTGACTAT 26373 32 100.0 35 ................................ TGGTTGGAGCATGGCATAATGATGGGGTTGCCGTG 26440 32 100.0 34 ................................ ACGATATCGAAAGAAAATCCCATGCCTCAGTATG 26506 32 100.0 34 ................................ AGTCTTGAACAGGTGCGGGGATGACTCTTTCAGC 26572 32 100.0 34 ................................ ACATGGTTTACTTTCTTTGTCCACCTTTACCTCC 26638 32 100.0 34 ................................ AAGCGCTGCATGAGACAAATACAAGTGATGCTAT 26704 32 100.0 34 ................................ GATACAATTCCTCACTCGCTGATAGGCCAATATC 26770 32 100.0 34 ................................ TACCGGTTCCTGGAACAGTACCGTGATGAAAGAA 26836 32 100.0 33 ................................ CCACTGATGAATAATCCATTTGGCTCTTCACGC 26901 32 100.0 34 ................................ AGGAGGCCAGTAACACGTCTGTGGAGATGCAGCT 26967 32 100.0 34 ................................ ATTATGAACAGCGCGACCAGGACGGCCCTACGTC 27033 32 100.0 36 ................................ CTGTGTCTTTGTCTTACGGTGGGGAACCTGCATGAA 27101 32 100.0 33 ................................ ATTAGTCATGTTAAGTATTGGGACTATTTTTTC 27166 32 100.0 34 ................................ CTGCTGTACGCCATTACCATACAGAGTCCCTGAT 27232 32 100.0 34 ................................ AGACGTTATACCTTACTGCGTTGGATGAACTAAG 27298 32 100.0 34 ................................ CTACTGTGGACGGACTTTTTATAACCGACCTGGT 27364 32 100.0 34 ................................ AAATTAAAAAAGAACAATCAGTTGCCGAAGTATC 27430 32 100.0 34 ................................ ATCCGAGTACTTTTCCTCCGATTCTGGCGGTTCA 27496 32 100.0 34 ................................ ATAGTCCTGATATCTGTCTTGTGCTGATTCGTAA 27562 32 100.0 35 ................................ CGGTTGTCTCCATCTTTTCTACAATTCGATTAAGG 27629 32 100.0 34 ................................ TCTAAATCTCCACCAGCATTCAGGATATCCACCA 27695 32 100.0 34 ................................ GGCACATAATCCTTTGGATCAATTCGGATGGCAT 27761 32 100.0 35 ................................ ATGCTCCGTATCAATGACGGCAATTTTGCTCCAAT 27828 32 100.0 34 ................................ TGTATATGGTACATTTAGTGTTTTCCCGTTCAGA 27894 32 100.0 34 ................................ ACTTGGCTGCACATGATTTTCAATCACCCCCAGC 27960 32 100.0 33 ................................ ATTGGATGAGGGCAATAAAAAGCAGTACGGACA 28025 32 100.0 34 ................................ ATCTGGCACAATGCAGGTGCCATCCTTAATCAGC 28091 32 100.0 34 ................................ AATGCATTGTGCACCGAAGTCTATGATTTTTTTT 28157 32 100.0 36 ................................ CTCCTGGATTTCCCGTTTGATGTCCTGGATGTCCGA 28225 32 100.0 34 ................................ CAGTTACCGTAATTTGCCTTTTATCACTGGATAC 28291 32 100.0 33 ................................ TGGAAGAAGCGTATCAAGATACATCCGTACCTT 28356 32 100.0 35 ................................ TCCCGCTGTCAGATGATGAAATCCGTAGGATTCAC 28423 32 100.0 35 ................................ AACACGGAACGGATATCATCCAGTGTGTACAACCC 28490 32 100.0 35 ................................ AGAAGCGAGAGGACACCGCCTAAGGGCGGCCCTGT 28557 32 100.0 34 ................................ TAATTATACAGGAGGTGGAGGCAGTGGACCCGTT 28623 32 100.0 36 ................................ TTCCTGCAAGCTCCACCGTTGCGTAATAGGCACTAC 28691 32 100.0 35 ................................ CACCTCTGGAGATGTAAATATCTCCGTCAGACTAT 28758 32 100.0 34 ................................ ATCTGTACTCTCAAGGCCCGCAGTGCCAAACTTA 28824 32 100.0 34 ................................ CCTGACGTAATGCAGGGAACGTATTCGATTCCCA 28890 32 100.0 35 ................................ TACCAGGACCTTCTTTCCGTCTAATGTTTCCCCCA 28957 32 100.0 34 ................................ CCCTTGTACGTCTGCAAAAAGTCTGCACATTGGA 29023 32 100.0 34 ................................ TAAATTTTAATTTTTTACTGGGTGACAAGTATAA 29089 32 100.0 35 ................................ CTGACTTTCGTCCGGGTTCCAGTCAAGGCTTCTAT 29156 32 100.0 34 ................................ AACTGCCGCGAATGAGTACGCTGTGTCTGTCTAC 29222 32 100.0 35 ................................ ATATGTCGCTACAGTATTCCTTTTAACCTTTATTT 29289 32 100.0 34 ................................ CTGTTAATTTTGCCATAAAATGTACCTCTCTTTC 29355 32 100.0 35 ................................ ATAGACAGGCACAGCCGGTTCTGCTGCGGTCTCTG 29422 32 100.0 34 ................................ ACTGCACCACTACGGGCAGCCATTGGTCTGCACA 29488 32 100.0 33 ................................ GGACAGATATACATATGCCGAATGAGGAAGAAA 29553 32 100.0 35 ................................ CTATATAAAAAGAAGAAATTGGCAGAGGGGACAAA 29620 32 100.0 34 ................................ GGTACATTTGGGCGGGCGAACGTGGAGAACGTGG 29686 32 100.0 33 ................................ GCTCATTTCGAAGCATTCGGCTAACTCATGCAA 29751 32 100.0 35 ................................ AGTGGATATTACGGACAAAGAGGGGCAGAGCGTTA 29818 32 100.0 34 ................................ AGCAGCCGGCATCATATCTGCGTGCCATGGCAGA 29884 32 100.0 34 ................................ TATATAAGAAGAAAAAGCTTGCAGAGGGGACAAA 29950 32 100.0 34 ................................ GGCTATCCAGGACCTTCAGGACCGAATTATCCAT 30016 32 100.0 34 ................................ GCCAAGAGGTTAAGTCATTTAGACATATACCATT 30082 32 100.0 33 ................................ TCTCTGGATTAAGGGGGAAGGGCCATAAACAGG 30147 32 100.0 33 ................................ ATATGGTGCAATCTGGAGGATTTACCCTGGAAG 30212 32 100.0 34 ................................ CTCCGTACATCAACAAATACATGATGACCATTGT 30278 32 100.0 35 ................................ CGCAGGAAAGAATCTCTTTCTTTAAGGCGCTTTTT 30345 32 100.0 36 ................................ AAAATCGGATCCGACGCTTATGGCCATTCCACCAAC 30413 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 68 32 100.0 34 GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGAGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTAAAGGGATGGTTGGCCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGTTGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TTCCGGGGTAGTCTCATAGCCGTTCACATAATAGCGTCTCCGCTCTCGCGTCGGAGCAAGTTAAAAATCCGCCAATTACAGAATTACATCCAGTTGCCCACTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCAAGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCTCCGCCGATTCCGATGGGTTTGCCGTCTGCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCTGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 75875-67432 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAB01000014.1 Enterocloster clostridioformis strain 2789STDY5834865, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 75874 33 100.0 33 ................................. CCGTTATATGTCCGTTCCTCTACCGTGGCCAGA 75808 33 100.0 36 ................................. ACAACAATAACGTTGCATACGACATGGCGGCATCTT 75739 33 100.0 36 ................................. TTACCTTGGTCATAGTGACCTCATAGACAATACCTG 75670 33 100.0 33 ................................. AGCCAAGGACGGTTGGAAGCAGACAATAAAGTT 75604 33 100.0 35 ................................. GGCAACTACGAATTTGAGGTTTCTGGCACAAACCG 75536 33 100.0 33 ................................. CCTTTATAAGCAGCCGGTCTGTCAGCTTATCCT 75470 33 100.0 35 ................................. TACGTAACGGATTACTATGTTTGGGACATTATACA 75402 33 100.0 33 ................................. TGCTTCGAAGCTATACTCTTCCAGCTCGCAATA 75336 33 100.0 33 ................................. AACCAGAGAACCTCCTATCTGCGTTCCCTCCTT 75270 33 100.0 35 ................................. TATATACTCACCCAGGCCTACAATCTCCCCCTTCC 75202 33 100.0 33 ................................. TGCTCCTCACTGGCCAGCTCCCAGTTTTTATGC 75136 33 100.0 36 ................................. TTCCAATAGGGAATACAAAAAGCTCAGGGCCACGCC 75067 33 100.0 34 ................................. CTTTCCCTTCTGCGGGGCGCATGATACGCCCCAC 75000 33 100.0 34 ................................. CCTCCTTGGCAGCTATTTCATGCAGGTTCCCCAC 74933 33 100.0 34 ................................. TGACAAATACACTCCCTTATTTGCATACACCTTG 74866 33 100.0 33 ................................. CGGACATCCCGCCCATACACCGCAGTACGGAAG 74800 33 100.0 33 ................................. TGCTGCCGATGCACTTGACTGGGCGTCTGTCTT 74734 33 100.0 35 ................................. AGTCAGGGTCTCAGTCTGCCTCCCCAATGTAATAC 74666 33 100.0 34 ................................. CTTCCTGTGCGGCCGGAGTTTATGCTCCACCACA 74599 33 100.0 34 ................................. TGAATCATTGGATAGCATGAGTTTCACACGTTTC 74532 33 100.0 34 ................................. AATTGCCACTCTCCGGGTAAATGCATCCAGTGTG 74465 33 100.0 34 ................................. CGTATCATTATCCTCATAACTCTTGACCACCATG 74398 33 100.0 34 ................................. CTGCCATCTAAGATATAATCGCAGACACGCCTTT 74331 33 100.0 35 ................................. ATGGATAACCCCATCTTTGTATATATTCCCCAGCA 74263 33 100.0 35 ................................. ATTCCGCTCTGCTCCTGATGGCCGGGTTCCCGGCC 74195 33 100.0 34 ................................. CACCATCAGCCGCTTTACAGCACTCAGGTATCCC 74128 33 100.0 33 ................................. AGATGCCACAGGTCAAGGAGCTGGGGCAGTACC 74062 33 100.0 35 ................................. CAGAGAGCCGGCTATATAGAACAAAAGAGGATGCG 73994 33 100.0 34 ................................. GAAGTATATCGGTATCCGTTACCACCGGCACCTC 73927 33 100.0 34 ................................. CAATCCTTACGAACCTACATGCCTTCAGCACAAA 73860 33 100.0 34 ................................. ATGTACTATTTTTTCATGCCTCCAAGCATCTGCT 73793 33 100.0 35 ................................. GAGGAACTGGACGAATTTGCAGGACCGGAAGAAAT 73725 33 100.0 35 ................................. TCCTACATCGAAGGGGAATGTCCCTACGCAGACAT 73657 33 100.0 34 ................................. CCAGGTGGGTGACTTGCGCTCCGCTATTACATGC 73590 33 100.0 33 ................................. CCAATCCTTTAAAAAAACGAGAGGTAAATCATA 73524 33 100.0 34 ................................. AAACAGCCAAGGACAATTATTTGACCGAAGAGGT 73457 33 100.0 36 ................................. TATAATGCTGACTGTCCTAAAATAGCAGTCGAAAAC 73388 33 100.0 35 ................................. AGAGGATTGGGAACAGCTTGTTTCAATCGGATTAG 73320 33 100.0 35 ................................. TCAAAGCGATACAAAAAATAAATAGCAGCACATTT 73252 33 100.0 33 ................................. TTTGCAGATTTTTTTTTAAAAATCCTAGATACC 73186 33 100.0 34 ................................. TTGGAGAGAAAAGAAAGCTATGCAATGCCAAATA 73119 33 100.0 35 ................................. CATGCTTACCGTGGGCCAACAGCAGCCGACTGTAC 73051 33 100.0 35 ................................. ATACCAGTCAAGATAATAGTAAATATCTGGTTCTT 72983 33 100.0 34 ................................. ATCAATGACCGCCATAGACAATTTGTCCTGTGTC 72916 33 100.0 33 ................................. CGCATTAACTGCGCGGAAGCTGGCTGTAGATGG 72850 33 100.0 36 ................................. CAGTACAGACCTGACAGCGGAAAACCTGCTTAACAA 72781 33 100.0 35 ................................. ATGAACCCCTGAGAAGCCCGCGGACCAAACCCTGC 72713 33 100.0 33 ................................. TCCTGCCCAATACTCAAGTGGGATGACTAATTC 72647 33 100.0 35 ................................. TCTCTTGATGAACTCTGCAACACCTTTGTATGAAT 72579 33 100.0 35 ................................. TTTTGGAACTGTAGCCACTGCGTCTGCAAAATGGG 72511 33 100.0 36 ................................. AAAATCGTTATTTGGAGGAATACATGAAAGCGAAAG 72442 33 100.0 33 ................................. TTTTGCGGTGCTGGCTTCCTGCCGCAGTCGTAC 72376 33 100.0 36 ................................. TCTGATTCAAGAAGCAGGTCCCGGTTCAGGGCGCAT 72307 33 100.0 33 ................................. AGACATCTCATTAACAACAAACGATACGATGTC 72241 33 100.0 34 ................................. AACGAATCGGGATATATGCAGACTACGCCAATAA 72174 33 100.0 36 ................................. ATATATGTACCACCCTTTCCCTGTAGCCGTTATAAC 72105 33 100.0 34 ................................. ATAGCCGTGAACTTCTCGTCTACAGTTGTTTTAA 72038 33 100.0 35 ................................. TATCAGGTCAATGATGCGCTGCAGCAGGTTTGCCA 71970 33 100.0 34 ................................. TTATTTGGTCATCCTTAATCAGTATGATTTTATC 71903 33 100.0 34 ................................. TCCAGATCGGCTGGCATCACCATCTGTTCATCTG 71836 33 100.0 35 ................................. GTATACGCAACCCGTACTGCGACAGGAAGCTGGAA 71768 33 100.0 37 ................................. TTTCATTTCCCGGTTACGCCAGTCATCATATATCCGG 71698 33 100.0 33 ................................. CATAAGCACACAGAACCATATTCATCCCTTAAG 71632 33 100.0 35 ................................. CTGTAATCATGGAAAGGCGCGCGCTGGTATTTGTA 71564 33 100.0 33 ................................. CCCTGCACCATCATAGTTGTAAGGGATTCCATC 71498 33 100.0 35 ................................. GCCAGAATGCAATTACGCATCACTACAGTACGCCT 71430 33 100.0 35 ................................. GCTGTCTATTTGAATTGCCTTGTAGTCCTTAAGCT 71362 33 100.0 34 ................................. CCCGTTGGTACCAACGGTCTCCGGCCTGACCGGC 71295 33 100.0 34 ................................. CTCCAGCCCCGGGACATTGATGGTGATGTCCTCC 71228 33 100.0 35 ................................. CGTTAATACCAAAGCGCCCTTTCCTGGCCACCCGG 71160 33 100.0 36 ................................. CCCATACTGGATACGGAACAGGTGAAGGGTTATGTG 71091 33 100.0 33 ................................. GTACATATTGTAACTTTACGGATGAAGAACGGG 71025 33 100.0 37 ................................. AACTGTTCCGTTTGCCACATGGACCACTCAATACCCT 70955 33 100.0 33 ................................. TGGCATCAGACCATAAAACTATGGCCATGACTT 70889 33 100.0 33 ................................. AACAGCGAACTGCAGAACAACCCCATCGACCCG 70823 33 100.0 34 ................................. AATTTTATTTGATATAGCATCACTTGTATTTGTC 70756 33 100.0 35 ................................. ATAATTCACGGCAACCCCATCATTGTGCCATACTC 70688 33 100.0 36 ................................. CTTGTATGCTCGTGGCGTGCGGGCCGGGTCTATAAC 70619 33 100.0 35 ................................. TTTGCATACTTCCATGTGTGCACACCAGATAGTTG 70551 33 100.0 33 ................................. TCCATTACTATTTCCAAATACATTTCTTACATA 70485 33 100.0 36 ................................. AGCTGTCAGTATAGCTCCCTGTCCCACGATTGTAGT 70416 33 100.0 33 ................................. TACGGCCTCTTTAACTGCTTGTGTGTAAGATGT 70350 33 100.0 36 ................................. GTCCATATGTTCCTCTAAGGCCGCAAGCATACGCCG 70281 33 100.0 34 ................................. ATAGGTACCGGCGCCGGAATTGGCATACACCTGA 70214 33 100.0 34 ................................. TCTGCTCGTCTCATCATTTTTTATTTCCCCCATC 70147 33 100.0 33 ................................. CTTGGTATACAGTTTTTCAATACCAGCCTTAGT 70081 33 100.0 34 ................................. CCAGTAGTATATTGGTATTTCTTGACCGCTGTCC 70014 33 100.0 34 ................................. ATATTCCGGCTGCTCCACCAGGGACCAGTCAGGA 69947 33 100.0 33 ................................. CAATGGAACAACTACAACAGAGGGATTTGGCTC 69881 33 100.0 36 ................................. CCACAGTTCGACATGGTATTAGAATGCCAAAACCCA 69812 33 100.0 34 ................................. GGATAAGACCATGCGCACAGAGGGAAGGCTCCAG 69745 33 100.0 35 ................................. CCCTGCATTTCCGCCAATACTGTACTCCCATCCCA 69677 33 100.0 35 ................................. CTGGTAACGCTGGCTGCGCTGATAGGCACCAATGC 69609 33 100.0 36 ................................. CCCTATGCTTCTTGGCGAAATCGCTTGAAAATATGA 69540 33 100.0 35 ................................. TGGACAACTCCCTCAGTAAACAGCTTGAAGGTGAT 69472 33 100.0 35 ................................. TATCCGGTGGGTACCACCATGGATATCCGTAAAAC 69404 33 100.0 34 ................................. ATATGTACTCATAGGAAACCACCTCCTCCCAACA 69337 33 100.0 34 ................................. CTGTTATCCCCTCCTTTGTACCACATTGGATTCG 69270 33 100.0 33 ................................. TTTTGACCTCGCGGATAGAAAAACAGGCAAATA 69204 33 100.0 34 ................................. CATATCTAAAAAGAAAATATAAAACTGGTGACCC 69137 33 100.0 33 ................................. AAAATAGCAATTTAGCAAAAACCAATGCAAAGG 69071 33 100.0 33 ................................. CTCTCTTTCTTTTTCCAGGTCGCCAATCCTATG 69005 33 100.0 34 ................................. CGATGCTTTTATGTCATCACGTTTTAGACATAAT 68938 33 100.0 33 ................................. CATACATTATCAGCTTTATCCTCGCTTAATCTA 68872 33 100.0 33 ................................. CCGTGCGGATTATGTGGAGGTCAAGGAAGCAAA 68806 33 100.0 35 ................................. CGGTACCACGTAATAGTTATCATACTGGGTTTCTT 68738 33 100.0 33 ................................. CTTTGATACCTTATATGCCCTCACGTTATCCCC 68672 33 100.0 34 ................................. ATCCGCATATCGTTCCTGGAGGACCTGCACGGAT 68605 33 100.0 33 ................................. CATGATGGCATCCGCAAAGTATTTCTTGATGTT 68539 33 100.0 34 ................................. AATCTTACGGAGGGAGGGCAGGACATCCACCGCT 68472 33 100.0 34 ................................. CAGTTTGATGATTATACTATCCCGGTGGATATCA 68405 33 100.0 35 ................................. CGGAGTACTGGATATATGTCCTTTTCCGGATAGAC 68337 33 100.0 34 ................................. CTACCACAATTACATCAACTGTGCCCTGGCCTCT 68270 33 100.0 35 ................................. AATATCACAGATAATTTATATACAGATTCCATGCC 68202 33 100.0 34 ................................. TGGTGAGGCAACGCTGGAGTTCTGGGAGTATCTA 68135 33 100.0 34 ................................. CTATCGTTATTCCAAACTTCATGCAGAACTGACC 68068 33 100.0 35 ................................. TGGGACTCCACGTAAGCTTTATTATCTGCCAACGC 68000 33 100.0 33 ................................. CTGAAATATCATCCAACCGGAGGAATCCCATGG 67934 33 100.0 34 ................................. TTTAAAGAAGTTATGGCTCAGTTGTCGGTGGAGC 67867 33 100.0 34 ................................. ATCTGCCGCGCATCCGTCACAAACCCCTCATTCG 67800 33 100.0 34 ................................. CCCGCAATGCGCATATAGTTGGAGTACAACAGCC 67733 33 100.0 36 ................................. CATCTGGAAAAATACATGAAGCCGTAACGCCTAATG 67664 33 100.0 34 ................................. TTATCACATCAATCTGTGCCTGTAAATCTGCTAT 67597 33 100.0 33 ................................. ATATGACCTAATAGACACAGAGGAAAATCGAAA 67531 33 97.0 34 .............G................... TTCTGGAAATTCTTAAAATCACGGTTATCCCAAT 67464 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 126 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : AAGTCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTACTGCGCATTTACGATGTCAATGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGCGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGAGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : ATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCTGATTTCGTGATAGGCTTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTCACCCAATACCACCCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGTAATTACCTAATGCAGAACCATTTATGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //