Array 1 1239736-1236404 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKJG01000005.1 Acinetobacter sp. FDAARGOS_559 tig00000000_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1239735 30 96.7 30 .............................A CCAAGTTATTTAAGATGGTTGGTCTTTTAG 1239675 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 1239615 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 1239555 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 1239495 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 1239435 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 1239375 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 1239315 30 96.7 30 ............................A. AAGAAAGCATAATGGTATAGATCGTCTCCA 1239255 30 93.3 30 ............................AG AAAGGTCAGGCGCGACGAGTCGCTGCCCGC 1239195 30 93.3 30 ............................CA AACGTGGGTTACATCTAGTTGCCTGAGGAG 1239135 30 93.3 30 ............................AA TAAAAGATAGTGAACTAGTACACATAATTC 1239075 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 1239015 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 1238955 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 1238895 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 1238835 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 1238775 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 1238715 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 1238655 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 1238595 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 1238535 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 1238475 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 1238415 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 1238355 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 1238295 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 1238235 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 1238175 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 1238115 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 1238054 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 1237994 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 1237933 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 1237873 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 1237813 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 1237753 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 1237693 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 1237633 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 1237573 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 1237513 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 1237453 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 1237393 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 1237333 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 1237273 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 1237213 30 93.3 30 ............................AA GAGAACGAACGAAAGTTCATGGACATGTTG 1237153 30 96.7 30 .............................A AATGTGATTATTCAAGATAAGCTAGGCAGT 1237093 30 90.0 30 .........A..................GA CCAATGGAGCACGATAACCCCATGGTTTAT 1237033 30 96.7 30 .............................A AGTTAATTAAGGGTGTGGCTATGGTTGCAG 1236973 30 93.3 29 ............................AA AATCACAAATACATAAATCATTTTTTATC 1236914 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 1236854 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 1236794 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 1236734 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 1236673 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 1236613 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 1236553 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 1236493 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 1236433 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 56 30 94.9 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //