Array 1 25682-28534 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXOF01000019.1 Acinetobacter baumannii strain MC96 19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 25682 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 25742 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 25802 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 25862 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 25922 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 25982 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 26042 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 26102 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 26162 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 26222 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 26282 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 26342 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 26402 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 26462 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 26522 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 26582 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 26642 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 26702 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 26762 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 26822 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 26882 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 26942 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 27002 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 27062 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 27123 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 27183 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 27243 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 27303 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 27364 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 27424 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 27484 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 27544 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 27604 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 27664 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 27724 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 27784 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 27844 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 27904 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 27964 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 28024 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 28084 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 28144 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 28204 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 28265 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 28325 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 28385 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 28445 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 28505 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 48 30 95.1 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //